Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is ygeZ [C]

Identifier: 126697718

GI number: 126697718

Start: 195506

End: 196672

Strand: Direct

Name: ygeZ [C]

Synonym: CD0146

Alternate gene names: 126697718

Gene position: 195506-196672 (Clockwise)

Preceding gene: 126697717

Following gene: 126697719

Centisome position: 4.56

GC content: 32.22

Gene sequence:

>1167_bases
ATGATTTTTATAAAAAATGGTAAAATAAATACCATAACAAATGGGATAATTCATGGAGATATACTTATAGATGAAGGAAA
AATAATAGAAATTGGAGAAGATTTGATAGCTCCTTTAGATGTAGAGGTAATAGATGCTAGTAATAAACTTGTGTTTCCTG
GATTTATAGATGCTCATACTCACTTAGGCTTATGGGAAGATGGTATAGGGTTTGAAGGAGCAGATGGAAATGAAGAGACT
GACCCAATAACACCACAATTAAATCCTATAGATGGAATTAATCCAATGGATAGAACTTTTAAAGAAGCTTTTGAAGGTGG
AATAACTTCTGTTTGTACAACCCCTGGAAGTGCAAATGTTATGGGTGGTCAATGTATAGCTATAAAGACATGTGGAAAAA
GAATTGATAAAATGGTAATAAAAAATCCAGTTGCATCTAAAATTGCTTTTGGAGAAAATCCAAAGAGCTGTTATGGTCAG
GATGATAAATCTCCTCAAACTAGAATGGCTATAGCTGCTTTACTTAGAGAAAACCTAAAAAAAGCAGAAGAATATTTAGA
GGATATTGATATGTATGAGAGTCATGATGATGAAGACTGTGAAAAACCTGAATATGATATAAAAATGGAAAGTTTAATAC
CAGTTTTAAGAAGAGAAATTCCTTTTAAGGCACATGCTCATAGAGCAGATGATATGTTTACAGCAATAAGAATTGCAAAA
GAATTTAATTTAAAGCTTACATTAGACCATTGTACAGAAGGTCATCTTATTGTAGATGAATTAGTGGAAGAAGAGTTTCC
TGTAATAGTAGGGCCATCTTTGTCAGAAAGGTCTAAATTTGAGCTTAGAAATTTGACATTTAATACAGCAGGAATACTTT
CAAATGCAGGTCTTGATGTATGTATAATGACAGACCATCCAGTAATACCAGTTCAATATCTTCCAATATGTGCAGGTATT
GCAGTAAAACATGGTATGAAAGAAGAAAAAGCAATAGAATCAATTACGATAAATCCAGCTAAGACTTTAGGAATAGAAGA
TAGAGTAGGCTCTATAGAAGTTGGTAAAGATGCAGACCTAGTAATTTGGGATAATTCTCCACTAGAGATTCAAAGTAATG
TACTCTACACTATAATAAATGGCAAAGTAGTGTATGAGAAAAAATAA

Upstream 100 bases:

>100_bases
AGATTACTCGAGTGTATAAATGTTAAAAATTTGTAAAAGTATATAGTAAGAAAATATATTAAAATAAGAACGATAGTCTT
GAAAATCAGGAGGAAAATGA

Downstream 100 bases:

>100_bases
CTTGACAATTATTAAAAAATTAACTAATATAAGAGTGTAAGGAAAATTAAAAAATCAAAGAAGATCTTCGGGGCAGGGTG
AAATTCCCTACCGGCGGTAT

Product: amidohydrolase

Products: NA

Alternate protein names: Amidohydrolase Family Protein; Imidazolonepropionase; Amidohydrolase Imidazolonepropionase; Metal-Dependent Hydrolase Superfamily Protein; Imidazolonepropionase And Related Amidohydrolases; Dihydroorotase; Amidohydrolase-Like Domain-Containing Protein; Amidohydrolase Protein; Metallo-Dependent Hydrolase; Secreted; N-Acetylglucosamine-6-Phosphate Deacetylase; Amidohodrolase; Imidazolonepropionase Or Related Amidohydrolase; Imidazolone-5-Propionate Hydrolase; Aminohydrolase

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MIFIKNGKINTITNGIIHGDILIDEGKIIEIGEDLIAPLDVEVIDASNKLVFPGFIDAHTHLGLWEDGIGFEGADGNEET
DPITPQLNPIDGINPMDRTFKEAFEGGITSVCTTPGSANVMGGQCIAIKTCGKRIDKMVIKNPVASKIAFGENPKSCYGQ
DDKSPQTRMAIAALLRENLKKAEEYLEDIDMYESHDDEDCEKPEYDIKMESLIPVLRREIPFKAHAHRADDMFTAIRIAK
EFNLKLTLDHCTEGHLIVDELVEEEFPVIVGPSLSERSKFELRNLTFNTAGILSNAGLDVCIMTDHPVIPVQYLPICAGI
AVKHGMKEEKAIESITINPAKTLGIEDRVGSIEVGKDADLVIWDNSPLEIQSNVLYTIINGKVVYEKK

Sequences:

>Translated_388_residues
MIFIKNGKINTITNGIIHGDILIDEGKIIEIGEDLIAPLDVEVIDASNKLVFPGFIDAHTHLGLWEDGIGFEGADGNEET
DPITPQLNPIDGINPMDRTFKEAFEGGITSVCTTPGSANVMGGQCIAIKTCGKRIDKMVIKNPVASKIAFGENPKSCYGQ
DDKSPQTRMAIAALLRENLKKAEEYLEDIDMYESHDDEDCEKPEYDIKMESLIPVLRREIPFKAHAHRADDMFTAIRIAK
EFNLKLTLDHCTEGHLIVDELVEEEFPVIVGPSLSERSKFELRNLTFNTAGILSNAGLDVCIMTDHPVIPVQYLPICAGI
AVKHGMKEEKAIESITINPAKTLGIEDRVGSIEVGKDADLVIWDNSPLEIQSNVLYTIINGKVVYEKK
>Mature_388_residues
MIFIKNGKINTITNGIIHGDILIDEGKIIEIGEDLIAPLDVEVIDASNKLVFPGFIDAHTHLGLWEDGIGFEGADGNEET
DPITPQLNPIDGINPMDRTFKEAFEGGITSVCTTPGSANVMGGQCIAIKTCGKRIDKMVIKNPVASKIAFGENPKSCYGQ
DDKSPQTRMAIAALLRENLKKAEEYLEDIDMYESHDDEDCEKPEYDIKMESLIPVLRREIPFKAHAHRADDMFTAIRIAK
EFNLKLTLDHCTEGHLIVDELVEEEFPVIVGPSLSERSKFELRNLTFNTAGILSNAGLDVCIMTDHPVIPVQYLPICAGI
AVKHGMKEEKAIESITINPAKTLGIEDRVGSIEVGKDADLVIWDNSPLEIQSNVLYTIINGKVVYEKK

Specific function: Unknown

COG id: COG1228

COG function: function code Q; Imidazolonepropionase and related amidohydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.-.-.- [C]

Molecular weight: Translated: 42814; Mature: 42814

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFIKNGKINTITNGIIHGDILIDEGKIIEIGEDLIAPLDVEVIDASNKLVFPGFIDAHT
CEEEECCCEEEEECCEEEEEEEECCCCEEEECHHHCCCCCEEEEECCCCEEECCEECCCC
HLGLWEDGIGFEGADGNEETDPITPQLNPIDGINPMDRTFKEAFEGGITSVCTTPGSANV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCC
MGGQCIAIKTCGKRIDKMVIKNPVASKIAFGENPKSCYGQDDKSPQTRMAIAALLRENLK
CCCEEEEEEHHHHHHHHHHHCCCHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHH
KAEEYLEDIDMYESHDDEDCEKPEYDIKMESLIPVLRREIPFKAHAHRADDMFTAIRIAK
HHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHH
EFNLKLTLDHCTEGHLIVDELVEEEFPVIVGPSLSERSKFELRNLTFNTAGILSNAGLDV
HCCEEEEEECCCCCCEEHHHHHHHCCCEEECCCCCCCCCEEEHEEEEEHHHHHCCCCCEE
CIMTDHPVIPVQYLPICAGIAVKHGMKEEKAIESITINPAKTLGIEDRVGSIEVGKDADL
EEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHEEECCCHHHCCCCCCCCCEEECCCCCE
VIWDNSPLEIQSNVLYTIINGKVVYEKK
EEECCCCCEEECCEEEEEECCEEEEECC
>Mature Secondary Structure
MIFIKNGKINTITNGIIHGDILIDEGKIIEIGEDLIAPLDVEVIDASNKLVFPGFIDAHT
CEEEECCCEEEEECCEEEEEEEECCCCEEEECHHHCCCCCEEEEECCCCEEECCEECCCC
HLGLWEDGIGFEGADGNEETDPITPQLNPIDGINPMDRTFKEAFEGGITSVCTTPGSANV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCC
MGGQCIAIKTCGKRIDKMVIKNPVASKIAFGENPKSCYGQDDKSPQTRMAIAALLRENLK
CCCEEEEEEHHHHHHHHHHHCCCHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHH
KAEEYLEDIDMYESHDDEDCEKPEYDIKMESLIPVLRREIPFKAHAHRADDMFTAIRIAK
HHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHH
EFNLKLTLDHCTEGHLIVDELVEEEFPVIVGPSLSERSKFELRNLTFNTAGILSNAGLDV
HCCEEEEEECCCCCCEEHHHHHHHCCCEEECCCCCCCCCEEEHEEEEEHHHHHCCCCCEE
CIMTDHPVIPVQYLPICAGIAVKHGMKEEKAIESITINPAKTLGIEDRVGSIEVGKDADL
EEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHEEECCCHHHCCCCCCCCCEEECCCCCE
VIWDNSPLEIQSNVLYTIINGKVVYEKK
EEECCCCCEEECCEEEEEECCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA