| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is cutC [H]
Identifier: 126697713
GI number: 126697713
Start: 187366
End: 188040
Strand: Direct
Name: cutC [H]
Synonym: CD0141
Alternate gene names: 126697713
Gene position: 187366-188040 (Clockwise)
Preceding gene: 126697712
Following gene: 126697714
Centisome position: 4.37
GC content: 28.0
Gene sequence:
>675_bases ATGTTAGAAATAATAGGAATGTCAGTAGAAGACGCTAAAATTATAGAAGATTGTGGTGCAGATAGAATAGAGTTAGTTAG TGCTTTAACTGAAGGTGGATTGACACCAAGTTTTGGTCTTATAGAAAGTGTTGTTAACAGTGTAAAGATACCTGTGAACG TAATGATAAGACATCATGCGAAAAGTTTTGTATACAGTAAAGAAGATATAAGTATAATGCAAAAAGATATAAGTGTGGTT AAAGAGATTGGTGCTAATGGAGTTGTATTTGGTGTATTGGATAAAAACAACAATATAGATGAGAAAAATCTAAATGTTTT ATTGAAATGTTGTGATAATCTTGATGTTACATTTCATAGAGCCATAGATGAATCAAATACAATAGATAGTGTTAAAATTT TGAAGGATTATGATAAAATTACGAATATATTAACATCAGGTGGGAAAGGAAGTATAGTTCATAACATACAAATGATAAAA AATATGATGCTTAGTTCTAATCACATAAAAATTCTTTTAGGTGGAGGTCTTAATTTTAATAATATAGAAAAGATAAAGGA ATTAACTAAGGCAAGTAATTTTCATTTTGGTACAGCGATTAGAATAAATAACAGTCCTTTTGAAGATATAGATAGACAAA AGCTTAAACAACTCGTAAATATAATTTCAAGATAG
Upstream 100 bases:
>100_bases GAATAGCTCATAATCCTGATGAATACATGGATATAGAAGATATAATATTAAATGCAAAGATATTTGCAAATGCAATATAT GAATTAGCAAAGGAGTAGTT
Downstream 100 bases:
>100_bases TATATGAATATAAAATACTTAGTTTAAATAAAGAGAGTAAGTTAATTATAATTTGGGTATATGAATGTTAATAGGTATTA AATATGAAATTATTGTTGAG
Product: copper homeostasis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MLEIIGMSVEDAKIIEDCGADRIELVSALTEGGLTPSFGLIESVVNSVKIPVNVMIRHHAKSFVYSKEDISIMQKDISVV KEIGANGVVFGVLDKNNNIDEKNLNVLLKCCDNLDVTFHRAIDESNTIDSVKILKDYDKITNILTSGGKGSIVHNIQMIK NMMLSSNHIKILLGGGLNFNNIEKIKELTKASNFHFGTAIRINNSPFEDIDRQKLKQLVNIISR
Sequences:
>Translated_224_residues MLEIIGMSVEDAKIIEDCGADRIELVSALTEGGLTPSFGLIESVVNSVKIPVNVMIRHHAKSFVYSKEDISIMQKDISVV KEIGANGVVFGVLDKNNNIDEKNLNVLLKCCDNLDVTFHRAIDESNTIDSVKILKDYDKITNILTSGGKGSIVHNIQMIK NMMLSSNHIKILLGGGLNFNNIEKIKELTKASNFHFGTAIRINNSPFEDIDRQKLKQLVNIISR >Mature_224_residues MLEIIGMSVEDAKIIEDCGADRIELVSALTEGGLTPSFGLIESVVNSVKIPVNVMIRHHAKSFVYSKEDISIMQKDISVV KEIGANGVVFGVLDKNNNIDEKNLNVLLKCCDNLDVTFHRAIDESNTIDSVKILKDYDKITNILTSGGKGSIVHNIQMIK NMMLSSNHIKILLGGGLNFNNIEKIKELTKASNFHFGTAIRINNSPFEDIDRQKLKQLVNIISR
Specific function: Involved in copper homeostasis [H]
COG id: COG3142
COG function: function code P; Uncharacterized protein involved in copper resistance
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CutC family [H]
Homologues:
Organism=Homo sapiens, GI148596990, Length=198, Percent_Identity=39.3939393939394, Blast_Score=137, Evalue=7e-33, Organism=Escherichia coli, GI87081995, Length=183, Percent_Identity=35.5191256830601, Blast_Score=115, Evalue=2e-27, Organism=Caenorhabditis elegans, GI17556905, Length=217, Percent_Identity=32.7188940092166, Blast_Score=113, Evalue=6e-26, Organism=Drosophila melanogaster, GI21355415, Length=201, Percent_Identity=30.8457711442786, Blast_Score=107, Evalue=8e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005627 [H]
Pfam domain/function: PF03932 CutC [H]
EC number: NA
Molecular weight: Translated: 24808; Mature: 24808
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEIIGMSVEDAKIIEDCGADRIELVSALTEGGLTPSFGLIESVVNSVKIPVNVMIRHHA CEEEECCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHH KSFVYSKEDISIMQKDISVVKEIGANGVVFGVLDKNNNIDEKNLNVLLKCCDNLDVTFHR HHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEHH AIDESNTIDSVKILKDYDKITNILTSGGKGSIVHNIQMIKNMMLSSNHIKILLGGGLNFN HCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCC NIEKIKELTKASNFHFGTAIRINNSPFEDIDRQKLKQLVNIISR HHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLEIIGMSVEDAKIIEDCGADRIELVSALTEGGLTPSFGLIESVVNSVKIPVNVMIRHHA CEEEECCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHH KSFVYSKEDISIMQKDISVVKEIGANGVVFGVLDKNNNIDEKNLNVLLKCCDNLDVTFHR HHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEHH AIDESNTIDSVKILKDYDKITNILTSGGKGSIVHNIQMIKNMMLSSNHIKILLGGGLNFN HCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCC NIEKIKELTKASNFHFGTAIRINNSPFEDIDRQKLKQLVNIISR HHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA