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The map label for this gene is spoIIC [H]

Identifier: 126697696

GI number: 126697696

Start: 169522

End: 170586

Strand: Direct

Name: spoIIC [H]

Synonym: CD0124

Alternate gene names: 126697696

Gene position: 169522-170586 (Clockwise)

Preceding gene: 126697695

Following gene: 126697697

Centisome position: 3.95

GC content: 29.77

Gene sequence:

>1065_bases
ATGAAGAACCCATTGGTTGTTTTGTTAGGATTTGTGACTTGCTCTGTGTTAGTTCCATCACTTATAACTTTAGTTTCTTA
TAAAAATGTAGAATTAACTGAAAAACCAGAGAGCCCAGTATCTATAAACAAAACTATTAAAAAAAGTGATATTGAAGACA
AAGGTAATAAAGAAGAAAAAAATACAGTGAACTATGAAACTGTAAATAAAAAAGCACCAATTATCAATGTATATAATCAT
ATAACAGGGAAAACCGAAAAGATGGACATGGAGAACTATTTATGTGGAGTACTAGCTGGTGAGATGTCTTCAGAGTTTGA
TATAGAAGCTTTAAAAGCTCAATCTGTAGCAGCTAGAACATATGTAGTATATAAACAAGAACATGGTAAATCTAGTAAAC
ATAAAAATGCAGTAGTATGTACTGATTATAAACATTGTCAAGAATATAAGAGTTATGATACTCTTAAAAAATTAAATGGT
GAAGAATGGATTAAGAATAAATATTCCAAAATCCAAGAAGCAGTTAGAGGAACTAAAGGTCAAATAATAACTTATAATGA
TAAGGCGATACTTCCTCTTTATTTTTCTACATCTTCAGGAAAAACAGAAAATAGTGAAGAAGTATTTTCTGCAAAATATC
CTTATTTAAAGTCTGTGGAAAGTCCTTATGATAAGTATTCCCCTAAATTTGCGTCAACACTTAAAATAAGTAACACAGAT
TTTGTTAAAAGTCTTAGAAGGGCATATAGCACTATTGTGATAGATGTGAATAATTTAAGTAAACAAGTTTCAATAACTAA
AAGAAGTGATGCCGGAACTGTAGAAAAAATAAAATTAGGAAATAAAGAATTGACTGGAAAAGACATTAGAACTGTTTTTA
AATTGAACTCTGCAAACTTTGACATAAAATTTGGAGAAGGATACATAGATTTCGTGGTAAAAGGATATGGTCATGGTGTT
GGTATGAGCCAGTGGGGAGCAGAAGGAATGGCAGAAGAGGGCTATAAATATTATGATATATTATCACATTACTACACAGA
TACAAAAATAAAAGATATATACTAA

Upstream 100 bases:

>100_bases
TAGTAGAAGATTAATAATTGGTTTATAGAAGAAAGTTATAAATTAATAGGGTTGTTCATATACTTAAATACAAGGTTTTA
AAAGCTAAGGAGGAGAGTAT

Downstream 100 bases:

>100_bases
TAATTGTATAAAATGCCAAAAACACGTCAATAATCCAAATGTAGAAATATATTTGGAGGTGCAAAATGAAGAAAAAGCTG
TTAGAAAAAGATGGTTTTTA

Product: stage II sporulation protein D

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MKNPLVVLLGFVTCSVLVPSLITLVSYKNVELTEKPESPVSINKTIKKSDIEDKGNKEEKNTVNYETVNKKAPIINVYNH
ITGKTEKMDMENYLCGVLAGEMSSEFDIEALKAQSVAARTYVVYKQEHGKSSKHKNAVVCTDYKHCQEYKSYDTLKKLNG
EEWIKNKYSKIQEAVRGTKGQIITYNDKAILPLYFSTSSGKTENSEEVFSAKYPYLKSVESPYDKYSPKFASTLKISNTD
FVKSLRRAYSTIVIDVNNLSKQVSITKRSDAGTVEKIKLGNKELTGKDIRTVFKLNSANFDIKFGEGYIDFVVKGYGHGV
GMSQWGAEGMAEEGYKYYDILSHYYTDTKIKDIY

Sequences:

>Translated_354_residues
MKNPLVVLLGFVTCSVLVPSLITLVSYKNVELTEKPESPVSINKTIKKSDIEDKGNKEEKNTVNYETVNKKAPIINVYNH
ITGKTEKMDMENYLCGVLAGEMSSEFDIEALKAQSVAARTYVVYKQEHGKSSKHKNAVVCTDYKHCQEYKSYDTLKKLNG
EEWIKNKYSKIQEAVRGTKGQIITYNDKAILPLYFSTSSGKTENSEEVFSAKYPYLKSVESPYDKYSPKFASTLKISNTD
FVKSLRRAYSTIVIDVNNLSKQVSITKRSDAGTVEKIKLGNKELTGKDIRTVFKLNSANFDIKFGEGYIDFVVKGYGHGV
GMSQWGAEGMAEEGYKYYDILSHYYTDTKIKDIY
>Mature_354_residues
MKNPLVVLLGFVTCSVLVPSLITLVSYKNVELTEKPESPVSINKTIKKSDIEDKGNKEEKNTVNYETVNKKAPIINVYNH
ITGKTEKMDMENYLCGVLAGEMSSEFDIEALKAQSVAARTYVVYKQEHGKSSKHKNAVVCTDYKHCQEYKSYDTLKKLNG
EEWIKNKYSKIQEAVRGTKGQIITYNDKAILPLYFSTSSGKTENSEEVFSAKYPYLKSVESPYDKYSPKFASTLKISNTD
FVKSLRRAYSTIVIDVNNLSKQVSITKRSDAGTVEKIKLGNKELTGKDIRTVFKLNSANFDIKFGEGYIDFVVKGYGHGV
GMSQWGAEGMAEEGYKYYDILSHYYTDTKIKDIY

Specific function: May act at the level of sigma-G activity or its stability. SpoIID is probably required for engulfment [H]

COG id: COG2385

COG function: function code D; Sporulation protein and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013486
- InterPro:   IPR013693
- InterPro:   IPR014225 [H]

Pfam domain/function: PF08486 SpoIID [H]

EC number: NA

Molecular weight: Translated: 40006; Mature: 40006

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNPLVVLLGFVTCSVLVPSLITLVSYKNVELTEKPESPVSINKTIKKSDIEDKGNKEEK
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHCCCCCCCCCCCC
NTVNYETVNKKAPIINVYNHITGKTEKMDMENYLCGVLAGEMSSEFDIEALKAQSVAART
CCCCEEEECCCCCEEEEHHHCCCCCHHHCHHHHHHHHHHHCCCCCCCHHHHHHHHHHEEE
YVVYKQEHGKSSKHKNAVVCTDYKHCQEYKSYDTLKKLNGEEWIKNKYSKIQEAVRGTKG
EEEEECCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC
QIITYNDKAILPLYFSTSSGKTENSEEVFSAKYPYLKSVESPYDKYSPKFASTLKISNTD
CEEEECCCEEEEEEEECCCCCCCCCHHHHHCCCCHHHHHCCCHHHCCCCHHHEEEECCHH
FVKSLRRAYSTIVIDVNNLSKQVSITKRSDAGTVEKIKLGNKELTGKDIRTVFKLNSANF
HHHHHHHHHHEEEEEECCCCCEEEEEECCCCCCEEEEECCCCCCCCHHHEEHEEECCCCE
DIKFGEGYIDFVVKGYGHGVGMSQWGAEGMAEEGYKYYDILSHYYTDTKIKDIY
EEEECCCEEEEEEECCCCCCCCHHHCCCCHHHCCCHHHHHHHHHHCCCEEECCC
>Mature Secondary Structure
MKNPLVVLLGFVTCSVLVPSLITLVSYKNVELTEKPESPVSINKTIKKSDIEDKGNKEEK
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHCCCCCCCCCCCC
NTVNYETVNKKAPIINVYNHITGKTEKMDMENYLCGVLAGEMSSEFDIEALKAQSVAART
CCCCEEEECCCCCEEEEHHHCCCCCHHHCHHHHHHHHHHHCCCCCCCHHHHHHHHHHEEE
YVVYKQEHGKSSKHKNAVVCTDYKHCQEYKSYDTLKKLNGEEWIKNKYSKIQEAVRGTKG
EEEEECCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC
QIITYNDKAILPLYFSTSSGKTENSEEVFSAKYPYLKSVESPYDKYSPKFASTLKISNTD
CEEEECCCEEEEEEEECCCCCCCCCHHHHHCCCCHHHHHCCCHHHCCCCHHHEEEECCHH
FVKSLRRAYSTIVIDVNNLSKQVSITKRSDAGTVEKIKLGNKELTGKDIRTVFKLNSANF
HHHHHHHHHHEEEEEECCCCCEEEEEECCCCCCEEEEECCCCCCCCHHHEEHEEECCCCE
DIKFGEGYIDFVVKGYGHGVGMSQWGAEGMAEEGYKYYDILSHYYTDTKIKDIY
EEEECCCEEEEEEECCCCCCCCHHHCCCCHHHCCCHHHHHHHHHHCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3114424 [H]