Click here to switch to the map view.

The map label for this gene is rpmG

Identifier: 126697625

GI number: 126697625

Start: 85167

End: 85316

Strand: Direct

Name: rpmG

Synonym: CD0058A

Alternate gene names: 126697625

Gene position: 85167-85316 (Clockwise)

Preceding gene: 126697624

Following gene: 126697626

Centisome position: 1.99

GC content: 28.0

Gene sequence:

>150_bases
ATGAGAGTTAAAGTAACTTTAGCATGTACAGAGTGTAAGCAAAGAAACTACAACACTACTAAGAATAAGAAAAACAATCC
AGACAGAATAGAATTACAAAAATATTGTAGATTCTGTAAAAAGCATACAACTCATAAAGAAACAAAATAG

Upstream 100 bases:

>100_bases
TGAATACTGTAGATTTTTAATAAATACATATTTTAAAGATATTATATTCACATATATTAACAATATATATTATTGTATTA
CAAAGTTGGAGGTGTATCAG

Downstream 100 bases:

>100_bases
TTTTTTATAAGGATGTGAGTATGGAATGGCTGCCCAAAAAAATGACGGTGCAAAAACTAAAAAAAGGTTTAGTTTGTTTG
GATACTTAAAAGAAACTAAA

Product: 50S ribosomal protein L33

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 49; Mature: 49

Protein sequence:

>49_residues
MRVKVTLACTECKQRNYNTTKNKKNNPDRIELQKYCRFCKKHTTHKETK

Sequences:

>Translated_49_residues
MRVKVTLACTECKQRNYNTTKNKKNNPDRIELQKYCRFCKKHTTHKETK
>Mature_49_residues
MRVKVTLACTECKQRNYNTTKNKKNNPDRIELQKYCRFCKKHTTHKETK

Specific function: Unknown

COG id: COG0267

COG function: function code J; Ribosomal protein L33

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L33P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL33_CLOD6 (Q18CE3)

Other databases:

- EMBL:   AM180355
- RefSeq:   YP_001086522.1
- ProteinModelPortal:   Q18CE3
- SMR:   Q18CE3
- STRING:   Q18CE3
- GeneID:   4916671
- GenomeReviews:   AM180355_GR
- KEGG:   cdf:CD0058A
- NMPDR:   fig|1496.1.peg.3135
- eggNOG:   COG0267
- HOGENOM:   HBG751058
- ProtClustDB:   PRK00504
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00294
- InterPro:   IPR001705
- InterPro:   IPR018264
- InterPro:   IPR011332
- TIGRFAMs:   TIGR01023

Pfam domain/function: PF00471 Ribosomal_L33; SSF57829 Ribosomal_zn-bd

EC number: NA

Molecular weight: Translated: 5959; Mature: 5959

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: PS00582 RIBOSOMAL_L33

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

8.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
10.2 %Cys+Met (Translated Protein)
8.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
10.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVKVTLACTECKQRNYNTTKNKKNNPDRIELQKYCRFCKKHTTHKETK
CCEEEEEECCCHHCCCCCCCCCCCCCCCEECHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRVKVTLACTECKQRNYNTTKNKKNNPDRIELQKYCRFCKKHTTHKETK
CCEEEEEECCCHHCCCCCCCCCCCCCCCEECHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA