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The map label for this gene is ybaB [C]

Identifier: 126697583

GI number: 126697583

Start: 22166

End: 22516

Strand: Direct

Name: ybaB [C]

Synonym: CD0017

Alternate gene names: 126697583

Gene position: 22166-22516 (Clockwise)

Preceding gene: 126697582

Following gene: 126697584

Centisome position: 0.52

GC content: 34.47

Gene sequence:

>351_bases
ATGGCTAAAAAAGGTTTTGGAGGCGGAATGATGCCTGGTGGTGGAAATATGAACAACTTGTTAAAGCAGGCTCAAAAAAT
GCAAGAAAATATGCAAAAAGCTCAACAAGAGTTAGAAAGTAAAGAAGTAGAAGCTTCAGTTGGTGGAGGAGCAGTTACTG
TAAAAGTTAATGGTAAAAAAGAAGTTATAGATATAACTATCAAGCCAGAAGTAGTTGATCCAGATGATATAGAAATGCTA
CAAGATTTAGTTTTAAGTGCAGTAAATCAAGCATTGAGAAATATTGATGATATACAAGCAAGTCAAATGAGTAAGGTAAC
TGGAGGTATGAATATACCTGGGTTATTCTAG

Upstream 100 bases:

>100_bases
TTAGAAATAAAAGATAGTATTGATGAAAATGAGAGTAAATAATAAAATACTATTATGATATAATAATAAAATGAAAATAA
GTTTAGGAGGAATAGTGTTT

Downstream 100 bases:

>100_bases
TAGGTGGTATTTATGCAAGTTTATACAGGTCCCATAACGAGACTTATAGAGGAATTTTCAAAGCTTCCTGGAGTAGGAAG
AAAAACTGCTCAAAGATTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MAKKGFGGGMMPGGGNMNNLLKQAQKMQENMQKAQQELESKEVEASVGGGAVTVKVNGKKEVIDITIKPEVVDPDDIEML
QDLVLSAVNQALRNIDDIQASQMSKVTGGMNIPGLF

Sequences:

>Translated_116_residues
MAKKGFGGGMMPGGGNMNNLLKQAQKMQENMQKAQQELESKEVEASVGGGAVTVKVNGKKEVIDITIKPEVVDPDDIEML
QDLVLSAVNQALRNIDDIQASQMSKVTGGMNIPGLF
>Mature_115_residues
AKKGFGGGMMPGGGNMNNLLKQAQKMQENMQKAQQELESKEVEASVGGGAVTVKVNGKKEVIDITIKPEVVDPDDIEMLQ
DLVLSAVNQALRNIDDIQASQMSKVTGGMNIPGLF

Specific function: Unknown

COG id: COG0718

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0133 family

Homologues:

Organism=Escherichia coli, GI1786677, Length=106, Percent_Identity=44.3396226415094, Blast_Score=87, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y017_CLOD6 (Q18CA3)

Other databases:

- EMBL:   AM180355
- RefSeq:   YP_001086480.1
- ProteinModelPortal:   Q18CA3
- SMR:   Q18CA3
- STRING:   Q18CA3
- GeneID:   4916106
- GenomeReviews:   AM180355_GR
- KEGG:   cdf:CD0017
- eggNOG:   COG0718
- HOGENOM:   HBG734215
- OMA:   MLQDLIL
- ProtClustDB:   CLSK2534337
- HAMAP:   MF_00274
- InterPro:   IPR004401
- Gene3D:   G3DSA:3.30.1310.10
- PIRSF:   PIRSF004555
- TIGRFAMs:   TIGR00103

Pfam domain/function: PF02575 DUF149; SSF82607 CHP00103

EC number: NA

Molecular weight: Translated: 12375; Mature: 12243

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.8 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.0 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKGFGGGMMPGGGNMNNLLKQAQKMQENMQKAQQELESKEVEASVGGGAVTVKVNGKK
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCE
EVIDITIKPEVVDPDDIEMLQDLVLSAVNQALRNIDDIQASQMSKVTGGMNIPGLF
EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
AKKGFGGGMMPGGGNMNNLLKQAQKMQENMQKAQQELESKEVEASVGGGAVTVKVNGKK
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCE
EVIDITIKPEVVDPDDIEMLQDLVLSAVNQALRNIDDIQASQMSKVTGGMNIPGLF
EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA