| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is nrdG [C]
Identifier: 126697219
GI number: 126697219
Start: 1608738
End: 1609409
Strand: Direct
Name: nrdG [C]
Synonym: P9301_18811
Alternate gene names: 126697219
Gene position: 1608738-1609409 (Clockwise)
Preceding gene: 126697218
Following gene: 126697220
Centisome position: 97.98
GC content: 30.51
Gene sequence:
>672_bases ATGACAAATTTTTTACCATTAGTCGAACAATTTCATTCATTACAAGGTGAAGGTTATCACGCTGGAAAAAGTGCTTTTTT TGTAAGATTAGCTGGATGTAAAGTTGGATGTTCGTGGTGCGATACCAAGAATTCATGGGACGAGAAAAAATACCCTTCTA TATCAATTGAAAAAATAATAGATCGAATAAAAATTGCCAGAGAAAAAGGAGCATCTTTTTGCGTTATTACTGGTGGTGAA CCTTTACAACATAACTTAGATAATTTTTGCAAAGCTATAAAAAAAATGACTATGGGAGAAGAACTAAAGCCAATGAAGAT TCATATTGAAACAAGTGGAGTTAATTCGATATCGGGAAGCTATGACTGGATTACTTTATCTCCTAAAAGACACTCACCTC CAAAAAGTTATTTTTTAAAAAACTGCAATGAAATCAAAATAATCATAAATGAAATAGAAGATATTGAATTTGCTATACAA ATAAAAAAAGAAACTTTAAAACAATATCACCCCTCTAAAAGCGAAGATGGCTTAAAAAAAGAAGATAAAATTTTTTATTT ACAGCCAGCATGGAACAATGCGAATGGTTTTTCTCTTGCTATTGATTTCGTAAAAAATAACCCCGATTGGAAATTGAGCC TTCAAACTCACAAATACTTAAAAATTAATTGA
Upstream 100 bases:
>100_bases GACCTGGCAAACCTCATCCTTTATTTAAAGGTTTAATAAAAGCCTCTCAAGATAAGTTAACTCAATCAAATTAATATTCT TTATTTTTTTGAATGAAAAA
Downstream 100 bases:
>100_bases AATCATATGAATCTTAAAAATAAATCGATAGTAGTTTTATTATCTGGAGGTTTAGATTCTTCTACAGTTACTGGTATCGC AAAAAAATCCGAAGCTAAAA
Product: putative organic radical activating protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MTNFLPLVEQFHSLQGEGYHAGKSAFFVRLAGCKVGCSWCDTKNSWDEKKYPSISIEKIIDRIKIAREKGASFCVITGGE PLQHNLDNFCKAIKKMTMGEELKPMKIHIETSGVNSISGSYDWITLSPKRHSPPKSYFLKNCNEIKIIINEIEDIEFAIQ IKKETLKQYHPSKSEDGLKKEDKIFYLQPAWNNANGFSLAIDFVKNNPDWKLSLQTHKYLKIN
Sequences:
>Translated_223_residues MTNFLPLVEQFHSLQGEGYHAGKSAFFVRLAGCKVGCSWCDTKNSWDEKKYPSISIEKIIDRIKIAREKGASFCVITGGE PLQHNLDNFCKAIKKMTMGEELKPMKIHIETSGVNSISGSYDWITLSPKRHSPPKSYFLKNCNEIKIIINEIEDIEFAIQ IKKETLKQYHPSKSEDGLKKEDKIFYLQPAWNNANGFSLAIDFVKNNPDWKLSLQTHKYLKIN >Mature_222_residues TNFLPLVEQFHSLQGEGYHAGKSAFFVRLAGCKVGCSWCDTKNSWDEKKYPSISIEKIIDRIKIAREKGASFCVITGGEP LQHNLDNFCKAIKKMTMGEELKPMKIHIETSGVNSISGSYDWITLSPKRHSPPKSYFLKNCNEIKIIINEIEDIEFAIQI KKETLKQYHPSKSEDGLKKEDKIFYLQPAWNNANGFSLAIDFVKNNPDWKLSLQTHKYLKIN
Specific function: Unknown
COG id: COG0602
COG function: function code O; Organic radical activating enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli ygcF and H.influenzae HI_1189 [H]
Homologues:
Organism=Escherichia coli, GI1789139, Length=239, Percent_Identity=32.6359832635983, Blast_Score=111, Evalue=3e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR007197 [H]
Pfam domain/function: PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 25547; Mature: 25415
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNFLPLVEQFHSLQGEGYHAGKSAFFVRLAGCKVGCSWCDTKNSWDEKKYPSISIEKII CCCHHHHHHHHHHCCCCCEECCCCEEEEEEECCEECCEECCCCCCCCCCCCCCCCHHHHH DRIKIAREKGASFCVITGGEPLQHNLDNFCKAIKKMTMGEELKPMKIHIETSGVNSISGS HHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCC YDWITLSPKRHSPPKSYFLKNCNEIKIIINEIEDIEFAIQIKKETLKQYHPSKSEDGLKK CCEEEECCCCCCCCHHHHHCCCCEEEEEEECCCCEEEEEEEEHHHHHHHCCCCCCCCCCC EDKIFYLQPAWNNANGFSLAIDFVKNNPDWKLSLQTHKYLKIN CCCEEEEEECCCCCCCEEEEEEEEECCCCEEEEEEEEEEEEEC >Mature Secondary Structure TNFLPLVEQFHSLQGEGYHAGKSAFFVRLAGCKVGCSWCDTKNSWDEKKYPSISIEKII CCHHHHHHHHHHCCCCCEECCCCEEEEEEECCEECCEECCCCCCCCCCCCCCCCHHHHH DRIKIAREKGASFCVITGGEPLQHNLDNFCKAIKKMTMGEELKPMKIHIETSGVNSISGS HHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCC YDWITLSPKRHSPPKSYFLKNCNEIKIIINEIEDIEFAIQIKKETLKQYHPSKSEDGLKK CCEEEECCCCCCCCHHHHHCCCCEEEEEEECCCCEEEEEEEEHHHHHHHCCCCCCCCCCC EDKIFYLQPAWNNANGFSLAIDFVKNNPDWKLSLQTHKYLKIN CCCEEEEEECCCCCCCEEEEEEEEECCCCEEEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12089438 [H]