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The map label for this gene is dedA [H]

Identifier: 126697154

GI number: 126697154

Start: 1537164

End: 1537823

Strand: Reverse

Name: dedA [H]

Synonym: P9301_18161

Alternate gene names: 126697154

Gene position: 1537823-1537164 (Counterclockwise)

Preceding gene: 126697155

Following gene: 126697152

Centisome position: 93.66

GC content: 29.85

Gene sequence:

>660_bases
TTGAACTTAATTTTTGTAAATTTTCTTACCTCGATTCCCGATTATATAAGTTTGGCGGTTGAGAAGAATTCTGCTGTTGC
ATACCTTACTATATGTTTGGCTATGTTTTTAGAAAATATAATTCCCCCAATCCCATCAGAAATAATAATGCCCTTGGGAG
GCTTTTTTGTTTATCAAGAAAAATTAAACTTTTATATTTTAATTTTCTGGGGTTTATTGGGAACAATACTAGGTTCATTG
CCTTGGTATTACTTAGGCAGATTAGTAAATGAAAAAAGACTTGCAAATTTTCTTGATAATAAAGGGAAATACTTGGGAAT
TTCTTCTAAAGATTTAATGAAAAGTAAGATGTGGTTTGAGAAATATGGGGTTTCACTGGTGTTTTGGGGACGATTAGTAC
CAGGTATAAGAACGTTAATTTCAGTTCCTGCTGGCATAGAACTTATGCCAGTAAGAAAATTTTTGATTTGGACTACATTT
GGTAGTTTTATATGGGTAGCGCTTCTCACTTATGCAGGTTTTTTATTCGGTGAAAATTACCCAATTATCAAAACTTACAT
TGATCAAATCAAGATTTTTGTAAAACCAATTTTAATTTTACTTTTTTTATATTTTTTTATCAAAATAATTAGTAGATTTA
TAAAGAAAAATAGGGCTTAG

Upstream 100 bases:

>100_bases
AAATAGGGGCAAAATTAACAAAATTAACTAAAGAACAGGCTGATTATATTAGTGTTTCGGTTGAGGGACCATATAAATCA
GAATTTTATAGATACTAAGT

Downstream 100 bases:

>100_bases
AAGGGGATTTCACTTGAACTATTACTATTGTTAGAATATCCATTATTATCAGATTCTTTTCGGGAGCCAAGTAAGTTTAA
TCTATCTACTCTCACAACTG

Product: DedA family alkaline phosphatase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MNLIFVNFLTSIPDYISLAVEKNSAVAYLTICLAMFLENIIPPIPSEIIMPLGGFFVYQEKLNFYILIFWGLLGTILGSL
PWYYLGRLVNEKRLANFLDNKGKYLGISSKDLMKSKMWFEKYGVSLVFWGRLVPGIRTLISVPAGIELMPVRKFLIWTTF
GSFIWVALLTYAGFLFGENYPIIKTYIDQIKIFVKPILILLFLYFFIKIISRFIKKNRA

Sequences:

>Translated_219_residues
MNLIFVNFLTSIPDYISLAVEKNSAVAYLTICLAMFLENIIPPIPSEIIMPLGGFFVYQEKLNFYILIFWGLLGTILGSL
PWYYLGRLVNEKRLANFLDNKGKYLGISSKDLMKSKMWFEKYGVSLVFWGRLVPGIRTLISVPAGIELMPVRKFLIWTTF
GSFIWVALLTYAGFLFGENYPIIKTYIDQIKIFVKPILILLFLYFFIKIISRFIKKNRA
>Mature_219_residues
MNLIFVNFLTSIPDYISLAVEKNSAVAYLTICLAMFLENIIPPIPSEIIMPLGGFFVYQEKLNFYILIFWGLLGTILGSL
PWYYLGRLVNEKRLANFLDNKGKYLGISSKDLMKSKMWFEKYGVSLVFWGRLVPGIRTLISVPAGIELMPVRKFLIWTTF
GSFIWVALLTYAGFLFGENYPIIKTYIDQIKIFVKPILILLFLYFFIKIISRFIKKNRA

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=219, Percent_Identity=27.8538812785388, Blast_Score=77, Evalue=9e-16,
Organism=Escherichia coli, GI1789384, Length=185, Percent_Identity=26.4864864864865, Blast_Score=61, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 25359; Mature: 25359

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLIFVNFLTSIPDYISLAVEKNSAVAYLTICLAMFLENIIPPIPSEIIMPLGGFFVYQE
CCEEEEHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHEEHH
KLNFYILIFWGLLGTILGSLPWYYLGRLVNEKRLANFLDNKGKYLGISSKDLMKSKMWFE
CCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHH
KYGVSLVFWGRLVPGIRTLISVPAGIELMPVRKFLIWTTFGSFIWVALLTYAGFLFGENY
HHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PIIKTYIDQIKIFVKPILILLFLYFFIKIISRFIKKNRA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNLIFVNFLTSIPDYISLAVEKNSAVAYLTICLAMFLENIIPPIPSEIIMPLGGFFVYQE
CCEEEEHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHEEHH
KLNFYILIFWGLLGTILGSLPWYYLGRLVNEKRLANFLDNKGKYLGISSKDLMKSKMWFE
CCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHH
KYGVSLVFWGRLVPGIRTLISVPAGIELMPVRKFLIWTTFGSFIWVALLTYAGFLFGENY
HHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PIIKTYIDQIKIFVKPILILLFLYFFIKIISRFIKKNRA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]