| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is pebB
Identifier: 126697122
GI number: 126697122
Start: 1505763
End: 1506524
Strand: Reverse
Name: pebB
Synonym: P9301_17841
Alternate gene names: 126697122
Gene position: 1506524-1505763 (Counterclockwise)
Preceding gene: 126697123
Following gene: 126697121
Centisome position: 91.76
GC content: 26.77
Gene sequence:
>762_bases ATGTTAATACAAGATACTATTTTTTACAGGCCAGATTGGAGATGGCATAATTTTTTAAAATATTTAACAAATAATTTAAG TAAATATAACTGTTTAGAAAAAAAAATACCCTCGGAATATTCTTATAAAGATTCAACTTATGGTTCAAAAAAATTAAAAA AAAATGTGAATCTATCTACTTGGGGTGTAACGCATAAAAAAAGAATTCAATTCGCAAGGGCAGTTTGTATAAATAGTCCT AATTACTCTGTTCTAAATTTTTTAATTATTCCTAATACTATTTATAACGTCCCTTTTTTTGGAGTAGATTTTGTTTCTCT TCCTAATAGTCATTTATTAGTGTTAGATTTTCAGCCTTCATTAAAAATACAAAAACAATACAATAATGAGTTACTAGAAA AACTCATAAAACTTAAAAATCATTGTCATTCATCACTGCCACTAGCTGAAAAAATGTCTGCGGATGTAGCTAGATTTTTT TCTCCAGGCGTAATATGGTCAAAATTACCAAAAGAAGAAAGAAGTGATTTTTTAATTACTAATCAACTTTATACCTCATT TAAGGAATATCTTGATTTGTATTTGGAAATTCTTTTCGAAAGCAAAGAAGTAAATCTTGAACTGCAAAAAGAATTAATAA ACGGTCAAAATGAATATTTGAATTATAGAAGAGATAACGATCCAGCAAGGCCAATGTTGTCGAGTTTGTTTGGTAAAGAA TTTACTGAATCTTTAATTGAAGAAGTTTTATTTACTACTTAA
Upstream 100 bases:
>100_bases CCCTGCAGATAAATTGTTTAAATCTTTTTTTGGAGAAAAATGGACAAAAAAATTTATCAATAAATTTCTTTTTACATTAA ATAATGAGATTATTCATTGA
Downstream 100 bases:
>100_bases AAGTCTTATAATTTACTGGAATTTGAAATCATATGAATAAAATTTCCGTTCTTTTTGTATGTTTGGGAAATATTTGTAGG TCTCCAGCAGCAGAAGCTAT
Product: phycoerythrobilin:ferredoxin oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MLIQDTIFYRPDWRWHNFLKYLTNNLSKYNCLEKKIPSEYSYKDSTYGSKKLKKNVNLSTWGVTHKKRIQFARAVCINSP NYSVLNFLIIPNTIYNVPFFGVDFVSLPNSHLLVLDFQPSLKIQKQYNNELLEKLIKLKNHCHSSLPLAEKMSADVARFF SPGVIWSKLPKEERSDFLITNQLYTSFKEYLDLYLEILFESKEVNLELQKELINGQNEYLNYRRDNDPARPMLSSLFGKE FTESLIEEVLFTT
Sequences:
>Translated_253_residues MLIQDTIFYRPDWRWHNFLKYLTNNLSKYNCLEKKIPSEYSYKDSTYGSKKLKKNVNLSTWGVTHKKRIQFARAVCINSP NYSVLNFLIIPNTIYNVPFFGVDFVSLPNSHLLVLDFQPSLKIQKQYNNELLEKLIKLKNHCHSSLPLAEKMSADVARFF SPGVIWSKLPKEERSDFLITNQLYTSFKEYLDLYLEILFESKEVNLELQKELINGQNEYLNYRRDNDPARPMLSSLFGKE FTESLIEEVLFTT >Mature_253_residues MLIQDTIFYRPDWRWHNFLKYLTNNLSKYNCLEKKIPSEYSYKDSTYGSKKLKKNVNLSTWGVTHKKRIQFARAVCINSP NYSVLNFLIIPNTIYNVPFFGVDFVSLPNSHLLVLDFQPSLKIQKQYNNELLEKLIKLKNHCHSSLPLAEKMSADVARFF SPGVIWSKLPKEERSDFLITNQLYTSFKEYLDLYLEILFESKEVNLELQKELINGQNEYLNYRRDNDPARPMLSSLFGKE FTESLIEEVLFTT
Specific function: Catalyzes the two-electron reduction of the C2 and C3(1) diene system of 15,16-dihydrobiliverdin
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HY2 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PEBB_PROM0 (A3PF82)
Other databases:
- EMBL: CP000576 - RefSeq: YP_001092008.1 - STRING: A3PF82 - GeneID: 4911850 - GenomeReviews: CP000576_GR - KEGG: pmg:P9301_17841 - eggNOG: NOG40636 - HOGENOM: HBG635096 - OMA: DLPFFGA - ProtClustDB: PRK13248 - BioCyc: PMAR167546:P9301ORF_1820-MONOMER - HAMAP: MF_00793 - InterPro: IPR009249 - InterPro: IPR022827
Pfam domain/function: PF05996 Fe_bilin_red
EC number: =1.3.7.3
Molecular weight: Translated: 29851; Mature: 29851
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIQDTIFYRPDWRWHNFLKYLTNNLSKYNCLEKKIPSEYSYKDSTYGSKKLKKNVNLST CCCCCCEEECCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCEE WGVTHKKRIQFARAVCINSPNYSVLNFLIIPNTIYNVPFFGVDFVSLPNSHLLVLDFQPS CCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHCCCCCCEEHEECCCCCEEEEECCCC LKIQKQYNNELLEKLIKLKNHCHSSLPLAEKMSADVARFFSPGVIWSKLPKEERSDFLIT CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHCCHHHCCCEEEH NQLYTSFKEYLDLYLEILFESKEVNLELQKELINGQNEYLNYRRDNDPARPMLSSLFGKE HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHH FTESLIEEVLFTT HHHHHHHHHHCCC >Mature Secondary Structure MLIQDTIFYRPDWRWHNFLKYLTNNLSKYNCLEKKIPSEYSYKDSTYGSKKLKKNVNLST CCCCCCEEECCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCEE WGVTHKKRIQFARAVCINSPNYSVLNFLIIPNTIYNVPFFGVDFVSLPNSHLLVLDFQPS CCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHCCCCCCEEHEECCCCCEEEEECCCC LKIQKQYNNELLEKLIKLKNHCHSSLPLAEKMSADVARFFSPGVIWSKLPKEERSDFLIT CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHCCHHHCCCEEEH NQLYTSFKEYLDLYLEILFESKEVNLELQKELINGQNEYLNYRRDNDPARPMLSSLFGKE HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHH FTESLIEEVLFTT HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA