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The map label for this gene is degQ [C]

Identifier: 126697019

GI number: 126697019

Start: 1412773

End: 1413903

Strand: Reverse

Name: degQ [C]

Synonym: P9301_16811

Alternate gene names: 126697019

Gene position: 1413903-1412773 (Counterclockwise)

Preceding gene: 126697024

Following gene: 126697018

Centisome position: 86.11

GC content: 35.63

Gene sequence:

>1131_bases
ATGAAATTTATCAAGATTAAATTTATTAATTTAATCCAAATTTTCATTATTTTTTGTTTTTGTTTAGTCAATTTCTCTCA
AAAAGCTGAAGTTTTAGCTTTAACATCTTCAGAAAGTCATAATTTCGTATCATCCGCAGTTAAAAATATTGGCCCTGCAG
TTGTAAAAATTGACACTGAGCGCTTGGTAGAGAGGCAACAATTTGATCCTACTTTACTTGACCCATTATTAAGGGATTTA
CTTGGTGAGCAAGGCATTACTCCTGAAAGGGAGAGAGGACAAGGCTCTGGGGTTATCATTAATGAAAATGGTTTGGTTCT
TACAAACGCTCATGTCGTAGAAAGAGTCGATAATGTTTCAGTTACTTTGGCAGATGGATCTATTTGTGATGGTGAAGTTT
TGGGGACGGATACAGTAACTGATCTTGCTTTAGTAAAAATTGATGAAGATGCTTATTCTGGTTTTGCTCCACTTGGAAAT
TCTGAAGATCTTGAAGTTGGGGATTGGGCAATAGCTCTTGGTACTCCTTATGGTCTTGAAAAAACAGTTACCTTAGGGAT
TGTAAGCAGCCTGCATAGAGATATTAATAGTTTAGGATTTTCAGATAAAAGGTTGGATCTTATTCAGACTGATGCGGCAA
TAAATCCAGGAAATTCTGGGGGACCACTCATAAATTCCAATGGCGAGGTAATTGGAATCAATACATTAGTAAGAAGTGGC
CCTGGAGCAGGTCTAGGTTTTGCGATTCCCATCAATCTGGCTAAAAGTGTTTCTGATCAGCTACTCAAAAATGGGGAAGT
GATTCATCCATATTTAGGGGTACAATTAATTTCTTTAAATCCTAGAATTGCTAAAGAACATAATCGAGATCCCAATTCTT
TAGTTCAATTACCCGAAAGAAACGGAGCTCTAATTCAATCAGTAATACCTAATAGCCCCGCTGAAAAAGCTGGTTTAAGA
AGAGGAGATTTAGTAATAGCAGCCGAAAATATCTCTATAAATGAGCCTAAGACTTTATTAGATGAAGTAGAAAAAGCTCA
GATAGGAAAAGTATTTCTTTTAAATATTTTGAGAGATAATAAAGAGATACAGATAAATATCAAACCAGAACCTCTCCCAG
GTTTGACATAA

Upstream 100 bases:

>100_bases
GAATTTGAAAATTTGTATTTTATGGATGTAAACAAAAAAACAACAATAATTAGTTTCTTCAATTAGATTATTTAAAAGAA
TTCCAGAAACTATTAATTAA

Downstream 100 bases:

>100_bases
AGCTCCCATTGAAATTTAATAATCTATAACCAATTAGAGAAAAAGATTTTGGATTCACAAACTCAAATGAAACAAGTTGT
TGCTGATGCAGCAATAAGGG

Product: trypsin-like serine protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MKFIKIKFINLIQIFIIFCFCLVNFSQKAEVLALTSSESHNFVSSAVKNIGPAVVKIDTERLVERQQFDPTLLDPLLRDL
LGEQGITPERERGQGSGVIINENGLVLTNAHVVERVDNVSVTLADGSICDGEVLGTDTVTDLALVKIDEDAYSGFAPLGN
SEDLEVGDWAIALGTPYGLEKTVTLGIVSSLHRDINSLGFSDKRLDLIQTDAAINPGNSGGPLINSNGEVIGINTLVRSG
PGAGLGFAIPINLAKSVSDQLLKNGEVIHPYLGVQLISLNPRIAKEHNRDPNSLVQLPERNGALIQSVIPNSPAEKAGLR
RGDLVIAAENISINEPKTLLDEVEKAQIGKVFLLNILRDNKEIQINIKPEPLPGLT

Sequences:

>Translated_376_residues
MKFIKIKFINLIQIFIIFCFCLVNFSQKAEVLALTSSESHNFVSSAVKNIGPAVVKIDTERLVERQQFDPTLLDPLLRDL
LGEQGITPERERGQGSGVIINENGLVLTNAHVVERVDNVSVTLADGSICDGEVLGTDTVTDLALVKIDEDAYSGFAPLGN
SEDLEVGDWAIALGTPYGLEKTVTLGIVSSLHRDINSLGFSDKRLDLIQTDAAINPGNSGGPLINSNGEVIGINTLVRSG
PGAGLGFAIPINLAKSVSDQLLKNGEVIHPYLGVQLISLNPRIAKEHNRDPNSLVQLPERNGALIQSVIPNSPAEKAGLR
RGDLVIAAENISINEPKTLLDEVEKAQIGKVFLLNILRDNKEIQINIKPEPLPGLT
>Mature_376_residues
MKFIKIKFINLIQIFIIFCFCLVNFSQKAEVLALTSSESHNFVSSAVKNIGPAVVKIDTERLVERQQFDPTLLDPLLRDL
LGEQGITPERERGQGSGVIINENGLVLTNAHVVERVDNVSVTLADGSICDGEVLGTDTVTDLALVKIDEDAYSGFAPLGN
SEDLEVGDWAIALGTPYGLEKTVTLGIVSSLHRDINSLGFSDKRLDLIQTDAAINPGNSGGPLINSNGEVIGINTLVRSG
PGAGLGFAIPINLAKSVSDQLLKNGEVIHPYLGVQLISLNPRIAKEHNRDPNSLVQLPERNGALIQSVIPNSPAEKAGLR
RGDLVIAAENISINEPKTLLDEVEKAQIGKVFLLNILRDNKEIQINIKPEPLPGLT

Specific function: Protease With A Shared Specificity With Degp. [C]

COG id: COG0265

COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Homo sapiens, GI4506141, Length=341, Percent_Identity=35.4838709677419, Blast_Score=177, Evalue=2e-44,
Organism=Homo sapiens, GI7019477, Length=343, Percent_Identity=33.8192419825073, Blast_Score=158, Evalue=6e-39,
Organism=Homo sapiens, GI22129776, Length=343, Percent_Identity=32.9446064139942, Blast_Score=157, Evalue=2e-38,
Organism=Homo sapiens, GI24308541, Length=343, Percent_Identity=32.0699708454811, Blast_Score=155, Evalue=8e-38,
Organism=Escherichia coli, GI1789629, Length=320, Percent_Identity=37.5, Blast_Score=182, Evalue=3e-47,
Organism=Escherichia coli, GI1786356, Length=278, Percent_Identity=39.2086330935252, Blast_Score=181, Evalue=5e-47,
Organism=Escherichia coli, GI1789630, Length=288, Percent_Identity=35.0694444444444, Blast_Score=165, Evalue=6e-42,
Organism=Drosophila melanogaster, GI24646839, Length=342, Percent_Identity=34.5029239766082, Blast_Score=161, Evalue=6e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR009003
- InterPro:   IPR001254
- InterPro:   IPR001940 [H]

Pfam domain/function: PF00595 PDZ; PF00089 Trypsin [H]

EC number: 3.4.21.- [C]

Molecular weight: Translated: 40477; Mature: 40477

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFIKIKFINLIQIFIIFCFCLVNFSQKAEVLALTSSESHNFVSSAVKNIGPAVVKIDTE
CCEEEEHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHCCCEEEEECHH
RLVERQQFDPTLLDPLLRDLLGEQGITPERERGQGSGVIINENGLVLTNAHVVERVDNVS
HHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHCCCCCEEEECCCCEEEECHHHHHHCCCCE
VTLADGSICDGEVLGTDTVTDLALVKIDEDAYSGFAPLGNSEDLEVGDWAIALGTPYGLE
EEEECCCCCCCCEECCCCCCEEEEEEECCHHCCCCCCCCCCCCCEECCEEEEECCCCCCC
KTVTLGIVSSLHRDINSLGFSDKRLDLIQTDAAINPGNSGGPLINSNGEVIGINTLVRSG
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCEECCCCCEEEEEHHHHCC
PGAGLGFAIPINLAKSVSDQLLKNGEVIHPYLGVQLISLNPRIAKEHNRDPNSLVQLPER
CCCCCEEEEEHHHHHHHHHHHHHCCCEEEHHHCEEEEECCCHHHHHCCCCHHHHHCCCCC
NGALIQSVIPNSPAEKAGLRRGDLVIAAENISINEPKTLLDEVEKAQIGKVFLLNILRDN
CCCEEHHHCCCCCHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCHHEEEHHHCCC
KEIQINIKPEPLPGLT
CEEEEEECCCCCCCCC
>Mature Secondary Structure
MKFIKIKFINLIQIFIIFCFCLVNFSQKAEVLALTSSESHNFVSSAVKNIGPAVVKIDTE
CCEEEEHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHCCCEEEEECHH
RLVERQQFDPTLLDPLLRDLLGEQGITPERERGQGSGVIINENGLVLTNAHVVERVDNVS
HHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHCCCCCEEEECCCCEEEECHHHHHHCCCCE
VTLADGSICDGEVLGTDTVTDLALVKIDEDAYSGFAPLGNSEDLEVGDWAIALGTPYGLE
EEEECCCCCCCCEECCCCCCEEEEEEECCHHCCCCCCCCCCCCCEECCEEEEECCCCCCC
KTVTLGIVSSLHRDINSLGFSDKRLDLIQTDAAINPGNSGGPLINSNGEVIGINTLVRSG
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCEECCCCCEEEEEHHHHCC
PGAGLGFAIPINLAKSVSDQLLKNGEVIHPYLGVQLISLNPRIAKEHNRDPNSLVQLPER
CCCCCEEEEEHHHHHHHHHHHHHCCCEEEHHHCEEEEECCCHHHHHCCCCHHHHHCCCCC
NGALIQSVIPNSPAEKAGLRRGDLVIAAENISINEPKTLLDEVEKAQIGKVFLLNILRDN
CCCEEHHHCCCCCHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCHHEEEHHHCCC
KEIQINIKPEPLPGLT
CEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA