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The map label for this gene is rpsT

Identifier: 126697016

GI number: 126697016

Start: 1410313

End: 1410606

Strand: Reverse

Name: rpsT

Synonym: P9301_16781

Alternate gene names: 126697016

Gene position: 1410606-1410313 (Counterclockwise)

Preceding gene: 126697018

Following gene: 126697015

Centisome position: 85.91

GC content: 25.85

Gene sequence:

>294_bases
GTGGCCAATAACAAATCAGCAAAAAAGAGAATACAAATTGCAGAAAGAAATCGTTTAATCAATAAGTCATATAAATCTAC
AGTTAGAACTTTGACTAAGAAAACTTTAGAAAATTGCGAAAAATATAAAAAAGAACCAAATGATGAAAATAAGAACTTAG
TTACTACAAGCCTTAATAAAGCCTTTAGTTTAATTGATAAAGCAGTTAAAAAAAATGTTCTTCACAAGAATAATGGAGCT
AATAGAAAATCAAAAATTAACAATTTTGTAAAAACTACGCTAACCACAAAGTAA

Upstream 100 bases:

>100_bases
AAAGGCTCAAAACCCAATTTAATAATTTTCTAAATTATATATGATTGATTAGTTGTCGATTTATTTGTTATGATATAAAT
CTTCTATTTATGTACCCTCT

Downstream 100 bases:

>100_bases
AAAGGCATATCAGAATTATGAGCAACATAGAACTCATAGATTCTCACTGTCACTTAATATTTGAAAATTTTGAAAGAGAT
CTTGAAGATGTTGTTTCAAG

Product: 30S ribosomal protein S20

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 97; Mature: 96

Protein sequence:

>97_residues
MANNKSAKKRIQIAERNRLINKSYKSTVRTLTKKTLENCEKYKKEPNDENKNLVTTSLNKAFSLIDKAVKKNVLHKNNGA
NRKSKINNFVKTTLTTK

Sequences:

>Translated_97_residues
MANNKSAKKRIQIAERNRLINKSYKSTVRTLTKKTLENCEKYKKEPNDENKNLVTTSLNKAFSLIDKAVKKNVLHKNNGA
NRKSKINNFVKTTLTTK
>Mature_96_residues
ANNKSAKKRIQIAERNRLINKSYKSTVRTLTKKTLENCEKYKKEPNDENKNLVTTSLNKAFSLIDKAVKKNVLHKNNGAN
RKSKINNFVKTTLTTK

Specific function: Binds directly to 16S ribosomal RNA

COG id: COG0268

COG function: function code J; Ribosomal protein S20

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S20P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS20_PROM0 (A3PEX6)

Other databases:

- EMBL:   CP000576
- RefSeq:   YP_001091902.1
- ProteinModelPortal:   A3PEX6
- SMR:   A3PEX6
- STRING:   A3PEX6
- GeneID:   4912696
- GenomeReviews:   CP000576_GR
- KEGG:   pmg:P9301_16781
- eggNOG:   COG0268
- HOGENOM:   HBG734145
- OMA:   LHKNNGA
- ProtClustDB:   PRK00239
- BioCyc:   PMAR167546:P9301ORF_1710-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00500
- InterPro:   IPR002583
- Gene3D:   G3DSA:1.20.58.110
- ProDom:   PD004231
- TIGRFAMs:   TIGR00029

Pfam domain/function: PF01649 Ribosomal_S20p; SSF46992 Ribosomal_S20p

EC number: NA

Molecular weight: Translated: 11151; Mature: 11020

Theoretical pI: Translated: 11.16; Mature: 11.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANNKSAKKRIQIAERNRLINKSYKSTVRTLTKKTLENCEKYKKEPNDENKNLVTTSLNK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
AFSLIDKAVKKNVLHKNNGANRKSKINNFVKTTLTTK
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ANNKSAKKRIQIAERNRLINKSYKSTVRTLTKKTLENCEKYKKEPNDENKNLVTTSLNK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
AFSLIDKAVKKNVLHKNNGANRKSKINNFVKTTLTTK
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA