| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is 126696972
Identifier: 126696972
GI number: 126696972
Start: 1366905
End: 1368146
Strand: Direct
Name: 126696972
Synonym: P9301_16341
Alternate gene names: NA
Gene position: 1366905-1368146 (Clockwise)
Preceding gene: 126696971
Following gene: 126696973
Centisome position: 83.25
GC content: 25.93
Gene sequence:
>1242_bases ATGAAACAATTTAAAATTAATAAAAATTATTTACTTTTAAAAAATTGGTGGGAGACTATTGATCTTACCAACTATGAAAA AAGTTATTTTAATAGAGAAATAATATCTTTTAATCAAAAACTTTTTAGGCTCAAAGAAAAAAAAATAAGAATTGGCGCAT ATGGTAAATCAGGCGTAGGGAAATCTTCTGTTTTAAATTCTTTATTAGAAAAAGATATATTTAAAACAGATATTATCAAT GGGACCACAAGAGAAATTAAGGCTGAAGAATGGAAATTAAAAGATCAATCACTCAACAGTATAGAGTTACTAGATTCTCC AGGATTTGATTTCTGCGATATTAAATTCCCAGATAAAGTTTACTCCTCTATAAATCACTCGGATCTTATTTTATTTATAA TTTCGGGAGATTTAAATAGAAATGAGTTACACGAAATCAGCTCTTTTATAAAAGACGGAAAAAAAATTATTTTAATTCTT AACAAAATCGATCTATTCAATAAAAATGAATTAAAAGAAATAATTGAAAATATAAAGTTTAAGCTTCCAAAAGATTTAAA TATTCCAATAATCATTAATAATAAAAACAATCTTAAAAATTACATAGCAAAATTAATCAATCAATATGGTGAGATACTAT TAACACTAAATTCTATTCAATTAGCTGACAAATTGTTTCTGAAAATAAAAGAGCAAAGATTGAAAAGAAGGCAGAAATTA GCTCAATCAACTATTGGTAAATTTTCGACTATGAAGGCATCCGCGGTAGCTCTTAATCCTTTTATTTTATTTGATGTTGC TGGTAGTTTTGCACTAGATACTGCATTAATTAAAGAATTAAGTAAGATATATGGCTTAAAGTTGCAAGGTGAATCTACAA GAAAAATATTTAAAAATATATCAATTAATAATGTATGTTTGGGAATCACTCAAGTCGGCCTTAATACCTCTTTCAACCTT ATTAAGAAACTAATTCTTTTAACAGCACCTTTTACTAACGGGATTTCATTATTACCCTATGGATCAATAGCAATAATTCA AGCTGCAATCGCAATATACTCTACAAAAATTCTAGGGAAATTAGCAGCAAAAGAGATATTTGTAAGAAGCAAAGCTTCTT TTATAGAACCTTCTATTTTGATCCAAAATATGAATTTTAATGACCCAGAGATTTTTAATTACATAAATATTTATTTTTCA AGTAGAAATTTAAATAATAATATTGTTAGTTTTCTTCCCTAA
Upstream 100 bases:
>100_bases AGGAGTGAAAGTAGTAGTAGATGAATTTGGAGGATTCGTGGGCATTATTGGTGCAGAAGCTGTGTTATCTGTTTTAGCTG GCTGGTGGAAAAAATAAATC
Downstream 100 bases:
>100_bases AATTTAAAATGGAAAAAAGCATTGCTTTATTTGGTACGAGTGCTGATCCACCCACGATTGGACACAAAAAAATTCTTGAA GAATTATCCAAAATTTATGC
Product: GTPase SAR1 and related small G protein
Products: NA
Alternate protein names: GTPase SAR1 And Related Small G Proteins; GTPase SAR1 And Related Small G Protein; Membrane Associated GTPase
Number of amino acids: Translated: 413; Mature: 413
Protein sequence:
>413_residues MKQFKINKNYLLLKNWWETIDLTNYEKSYFNREIISFNQKLFRLKEKKIRIGAYGKSGVGKSSVLNSLLEKDIFKTDIIN GTTREIKAEEWKLKDQSLNSIELLDSPGFDFCDIKFPDKVYSSINHSDLILFIISGDLNRNELHEISSFIKDGKKIILIL NKIDLFNKNELKEIIENIKFKLPKDLNIPIIINNKNNLKNYIAKLINQYGEILLTLNSIQLADKLFLKIKEQRLKRRQKL AQSTIGKFSTMKASAVALNPFILFDVAGSFALDTALIKELSKIYGLKLQGESTRKIFKNISINNVCLGITQVGLNTSFNL IKKLILLTAPFTNGISLLPYGSIAIIQAAIAIYSTKILGKLAAKEIFVRSKASFIEPSILIQNMNFNDPEIFNYINIYFS SRNLNNNIVSFLP
Sequences:
>Translated_413_residues MKQFKINKNYLLLKNWWETIDLTNYEKSYFNREIISFNQKLFRLKEKKIRIGAYGKSGVGKSSVLNSLLEKDIFKTDIIN GTTREIKAEEWKLKDQSLNSIELLDSPGFDFCDIKFPDKVYSSINHSDLILFIISGDLNRNELHEISSFIKDGKKIILIL NKIDLFNKNELKEIIENIKFKLPKDLNIPIIINNKNNLKNYIAKLINQYGEILLTLNSIQLADKLFLKIKEQRLKRRQKL AQSTIGKFSTMKASAVALNPFILFDVAGSFALDTALIKELSKIYGLKLQGESTRKIFKNISINNVCLGITQVGLNTSFNL IKKLILLTAPFTNGISLLPYGSIAIIQAAIAIYSTKILGKLAAKEIFVRSKASFIEPSILIQNMNFNDPEIFNYINIYFS SRNLNNNIVSFLP >Mature_413_residues MKQFKINKNYLLLKNWWETIDLTNYEKSYFNREIISFNQKLFRLKEKKIRIGAYGKSGVGKSSVLNSLLEKDIFKTDIIN GTTREIKAEEWKLKDQSLNSIELLDSPGFDFCDIKFPDKVYSSINHSDLILFIISGDLNRNELHEISSFIKDGKKIILIL NKIDLFNKNELKEIIENIKFKLPKDLNIPIIINNKNNLKNYIAKLINQYGEILLTLNSIQLADKLFLKIKEQRLKRRQKL AQSTIGKFSTMKASAVALNPFILFDVAGSFALDTALIKELSKIYGLKLQGESTRKIFKNISINNVCLGITQVGLNTSFNL IKKLILLTAPFTNGISLLPYGSIAIIQAAIAIYSTKILGKLAAKEIFVRSKASFIEPSILIQNMNFNDPEIFNYINIYFS SRNLNNNIVSFLP
Specific function: Unknown
COG id: COG1100
COG function: function code R; GTPase SAR1 and related small G proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47181; Mature: 47181
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQFKINKNYLLLKNWWETIDLTNYEKSYFNREIISFNQKLFRLKEKKIRIGAYGKSGVG CCCEEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCC KSSVLNSLLEKDIFKTDIINGTTREIKAEEWKLKDQSLNSIELLDSPGFDFCDIKFPDKV HHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHCCCCCCCCCEEEECCCCCCEEECCCCHHH YSSINHSDLILFIISGDLNRNELHEISSFIKDGKKIILILNKIDLFNKNELKEIIENIKF HHCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHC KLPKDLNIPIIINNKNNLKNYIAKLINQYGEILLTLNSIQLADKLFLKIKEQRLKRRQKL CCCCCCCCEEEECCCCCHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHHHHHHHHHHH AQSTIGKFSTMKASAVALNPFILFDVAGSFALDTALIKELSKIYGLKLQGESTRKIFKNI HHHHHHHHHHCCHHHEEECCEEEEECCCCHHHHHHHHHHHHHHHCEEECCCHHHHHHHCC SINNVCLGITQVGLNTSFNLIKKLILLTAPFTNGISLLPYGSIAIIQAAIAIYSTKILGK CCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHH LAAKEIFVRSKASFIEPSILIQNMNFNDPEIFNYINIYFSSRNLNNNIVSFLP HHHHHHHHHCCCCCCCCEEEEECCCCCCCHHEEEEEEEEECCCCCCCCEECCC >Mature Secondary Structure MKQFKINKNYLLLKNWWETIDLTNYEKSYFNREIISFNQKLFRLKEKKIRIGAYGKSGVG CCCEEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCC KSSVLNSLLEKDIFKTDIINGTTREIKAEEWKLKDQSLNSIELLDSPGFDFCDIKFPDKV HHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHCCCCCCCCCEEEECCCCCCEEECCCCHHH YSSINHSDLILFIISGDLNRNELHEISSFIKDGKKIILILNKIDLFNKNELKEIIENIKF HHCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHC KLPKDLNIPIIINNKNNLKNYIAKLINQYGEILLTLNSIQLADKLFLKIKEQRLKRRQKL CCCCCCCCEEEECCCCCHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHHHHHHHHHHH AQSTIGKFSTMKASAVALNPFILFDVAGSFALDTALIKELSKIYGLKLQGESTRKIFKNI HHHHHHHHHHCCHHHEEECCEEEEECCCCHHHHHHHHHHHHHHHCEEECCCHHHHHHHCC SINNVCLGITQVGLNTSFNLIKKLILLTAPFTNGISLLPYGSIAIIQAAIAIYSTKILGK CCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHH LAAKEIFVRSKASFIEPSILIQNMNFNDPEIFNYINIYFSSRNLNNNIVSFLP HHHHHHHHHCCCCCCCCEEEEECCCCCCCHHEEEEEEEEECCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA