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The map label for this gene is yfjD [C]

Identifier: 126696971

GI number: 126696971

Start: 1365924

End: 1366901

Strand: Direct

Name: yfjD [C]

Synonym: P9301_16331

Alternate gene names: 126696971

Gene position: 1365924-1366901 (Clockwise)

Preceding gene: 126696967

Following gene: 126696972

Centisome position: 83.19

GC content: 33.03

Gene sequence:

>978_bases
ATGGAACCAAGTGTTTACGGTTTAGTTGTTCTTATAATAATTATCTTAATTGGATCAGCATGTTGTTCGGGAGTAGAAGC
TGCTTTTTTAGCTGTAAATTCGATTCGAATTTTAGAGATAGCCTCTAAACAAAAACCAAAGAGTTCTGCGAATCAACTCC
TTAAACTCAGAAAACATCTTGGAAGGACATTAACTGTAATTACTATTACTAATAATGGATTTAACATAATTGGAAGTCTT
ATTTTAGGTGTATATGGAGCATTGGTTATTAGTAGTAGTTATGGCCTAACCCTTTTTTCAATTTCTTTTTACATACTAGT
CGTATTAGTAGGAGAAGTACTACCTAAGGCTCTTGGTACAAGATTCTCAGTTCAAATAGCATTATTATCAGTTCCTATCT
TGAGAATATTGCATACTTTAATGAGGCCATTTTTATTATTAATAGAACAAATATTTCCAGTTATTACGGCAGAAAATGAA
ATTTCAACAGATGAAGAAGAAATTAGACAAATGGCAAAAATTGGAAGCCAAAAAGGTTTAATAGAAGCTGATGAAGCAGC
AATGATATTTAAGGTTTTTCAATTAAATGATTTAAAAGCTAAAGATTTAATGCTCCCTAGAGTATCAGCACCTTGCCTTG
ATGGGTCTTCGAATCTTGAAGAAATTTCAAAACTTATAATGGACGATAACTCTCCATGGTGGGTTATTTTGGGAGATAAA
GTTGACAAAATACAAGGGGTAGTTCCCCGTGAAAGAATGCTAGCAGAGTTAATTAATGGAGAAAATAAAAAATTATTGTC
AGAAATTTGCGAACCTGTGGACTACATTCCTGAAATGATCAAGGCAGATCAATTATTAACAAGATTTGACAAGAATCATA
AAGGAGTGAAAGTAGTAGTAGATGAATTTGGAGGATTCGTGGGCATTATTGGTGCAGAAGCTGTGTTATCTGTTTTAGCT
GGCTGGTGGAAAAAATAA

Upstream 100 bases:

>100_bases
AAAACTTTATTTTCAGGTTTAAACATAGATTGTGTATTGGCGTGTTTAAAAAAAAAATGGAAGAATGAATTAATACAGAT
TTAGTAACTAATCTATTTTA

Downstream 100 bases:

>100_bases
ATCATGAAACAATTTAAAATTAATAAAAATTATTTACTTTTAAAAAATTGGTGGGAGACTATTGATCTTACCAACTATGA
AAAAAGTTATTTTAATAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MEPSVYGLVVLIIIILIGSACCSGVEAAFLAVNSIRILEIASKQKPKSSANQLLKLRKHLGRTLTVITITNNGFNIIGSL
ILGVYGALVISSSYGLTLFSISFYILVVLVGEVLPKALGTRFSVQIALLSVPILRILHTLMRPFLLLIEQIFPVITAENE
ISTDEEEIRQMAKIGSQKGLIEADEAAMIFKVFQLNDLKAKDLMLPRVSAPCLDGSSNLEEISKLIMDDNSPWWVILGDK
VDKIQGVVPRERMLAELINGENKKLLSEICEPVDYIPEMIKADQLLTRFDKNHKGVKVVVDEFGGFVGIIGAEAVLSVLA
GWWKK

Sequences:

>Translated_325_residues
MEPSVYGLVVLIIIILIGSACCSGVEAAFLAVNSIRILEIASKQKPKSSANQLLKLRKHLGRTLTVITITNNGFNIIGSL
ILGVYGALVISSSYGLTLFSISFYILVVLVGEVLPKALGTRFSVQIALLSVPILRILHTLMRPFLLLIEQIFPVITAENE
ISTDEEEIRQMAKIGSQKGLIEADEAAMIFKVFQLNDLKAKDLMLPRVSAPCLDGSSNLEEISKLIMDDNSPWWVILGDK
VDKIQGVVPRERMLAELINGENKKLLSEICEPVDYIPEMIKADQLLTRFDKNHKGVKVVVDEFGGFVGIIGAEAVLSVLA
GWWKK
>Mature_325_residues
MEPSVYGLVVLIIIILIGSACCSGVEAAFLAVNSIRILEIASKQKPKSSANQLLKLRKHLGRTLTVITITNNGFNIIGSL
ILGVYGALVISSSYGLTLFSISFYILVVLVGEVLPKALGTRFSVQIALLSVPILRILHTLMRPFLLLIEQIFPVITAENE
ISTDEEEIRQMAKIGSQKGLIEADEAAMIFKVFQLNDLKAKDLMLPRVSAPCLDGSSNLEEISKLIMDDNSPWWVILGDK
VDKIQGVVPRERMLAELINGENKKLLSEICEPVDYIPEMIKADQLLTRFDKNHKGVKVVVDEFGGFVGIIGAEAVLSVLA
GWWKK

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=320, Percent_Identity=26.25, Blast_Score=83, Evalue=3e-16,
Organism=Escherichia coli, GI145693175, Length=313, Percent_Identity=24.6006389776358, Blast_Score=81, Evalue=8e-17,
Organism=Escherichia coli, GI1786879, Length=178, Percent_Identity=22.4719101123595, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000644
- InterPro:   IPR002550 [H]

Pfam domain/function: PF00571 CBS; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 35728; Mature: 35728

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPSVYGLVVLIIIILIGSACCSGVEAAFLAVNSIRILEIASKQKPKSSANQLLKLRKHL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCCCHHHHHHHHHHHHHC
GRTLTVITITNNGFNIIGSLILGVYGALVISSSYGLTLFSISFYILVVLVGEVLPKALGT
CCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
RFSVQIALLSVPILRILHTLMRPFLLLIEQIFPVITAENEISTDEEEIRQMAKIGSQKGL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCC
IEADEAAMIFKVFQLNDLKAKDLMLPRVSAPCLDGSSNLEEISKLIMDDNSPWWVILGDK
CCCCCHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCC
VDKIQGVVPRERMLAELINGENKKLLSEICEPVDYIPEMIKADQLLTRFDKNHKGVKVVV
HHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEH
DEFGGFVGIIGAEAVLSVLAGWWKK
HHHCCCEEHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEPSVYGLVVLIIIILIGSACCSGVEAAFLAVNSIRILEIASKQKPKSSANQLLKLRKHL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCCCHHHHHHHHHHHHHC
GRTLTVITITNNGFNIIGSLILGVYGALVISSSYGLTLFSISFYILVVLVGEVLPKALGT
CCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
RFSVQIALLSVPILRILHTLMRPFLLLIEQIFPVITAENEISTDEEEIRQMAKIGSQKGL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCC
IEADEAAMIFKVFQLNDLKAKDLMLPRVSAPCLDGSSNLEEISKLIMDDNSPWWVILGDK
CCCCCHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCC
VDKIQGVVPRERMLAELINGENKKLLSEICEPVDYIPEMIKADQLLTRFDKNHKGVKVVV
HHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEH
DEFGGFVGIIGAEAVLSVLAGWWKK
HHHCCCEEHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]