| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is 126696650
Identifier: 126696650
GI number: 126696650
Start: 1099073
End: 1099555
Strand: Direct
Name: 126696650
Synonym: P9301_13121
Alternate gene names: NA
Gene position: 1099073-1099555 (Clockwise)
Preceding gene: 126696647
Following gene: 126696651
Centisome position: 66.94
GC content: 39.54
Gene sequence:
>483_bases ATGCCATCCGTAACTCGTCCCGCAAATCAGCCTGGAGAATTCTTAGTTGATTATGAAGAAAAAGTATTCCCAGATGTTAA AGCCGAACCAGGAGAGAAAGCCTTACTAACTTTTCATACTGTCGCTTTTGAGGGATCTATTGGTCTTGTTAATCTTTTGC AAGCTAGTCGTCTTATAAACAAGGGTTTTGAAACTTCAATATTGCTATATGGTCCTGGAGTGACATTAGGACTACAAAGA GGCTTTCCAAAGCTTGGGGATGCAGCATTTGATGGTCATTTAAATTTTAATGCTCGCTTAGAAAAATTTATGGGTCAAGG CGGAAAAGTTTATGCCTGCCGATTTGCACTACAAGCTTTGTACGGACATGGAGAAGGAGCTCTTACTCCAGGGATAAAAC CAATAAGTCCTTTAGATGTTCTAGATATCGTTTTAATGCATCGCAAAGAGGGGGCATTTATTTTAGATACTTGGACTCTG TAA
Upstream 100 bases:
>100_bases AATTTTTTGATCTGAAATCTTAAGTTAACTAATTTGGTGATATCGGTTACATTCTTTTAGAGAATCAAGTCAGAGAATGT TCTAAGTTTTTTTAATTTTC
Downstream 100 bases:
>100_bases GACATAAGATCCAAGAAAATGACTAAAACATTTAAAGTAGCTGCTGCTCAAGTTAGACCTGTACTTTTTGACTTAAATGG TTCATTGAATAAAGTTATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MPSVTRPANQPGEFLVDYEEKVFPDVKAEPGEKALLTFHTVAFEGSIGLVNLLQASRLINKGFETSILLYGPGVTLGLQR GFPKLGDAAFDGHLNFNARLEKFMGQGGKVYACRFALQALYGHGEGALTPGIKPISPLDVLDIVLMHRKEGAFILDTWTL
Sequences:
>Translated_160_residues MPSVTRPANQPGEFLVDYEEKVFPDVKAEPGEKALLTFHTVAFEGSIGLVNLLQASRLINKGFETSILLYGPGVTLGLQR GFPKLGDAAFDGHLNFNARLEKFMGQGGKVYACRFALQALYGHGEGALTPGIKPISPLDVLDIVLMHRKEGAFILDTWTL >Mature_159_residues PSVTRPANQPGEFLVDYEEKVFPDVKAEPGEKALLTFHTVAFEGSIGLVNLLQASRLINKGFETSILLYGPGVTLGLQRG FPKLGDAAFDGHLNFNARLEKFMGQGGKVYACRFALQALYGHGEGALTPGIKPISPLDVLDIVLMHRKEGAFILDTWTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17416; Mature: 17285
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSVTRPANQPGEFLVDYEEKVFPDVKAEPGEKALLTFHTVAFEGSIGLVNLLQASRLIN CCCCCCCCCCCCCEEEECHHHHCCCCCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHH KGFETSILLYGPGVTLGLQRGFPKLGDAAFDGHLNFNARLEKFMGQGGKVYACRFALQAL CCCCCEEEEECCCEEEECCCCCCCCCCCEECCCCCCHHHHHHHHCCCCCEEHHHHHHHHH YGHGEGALTPGIKPISPLDVLDIVLMHRKEGAFILDTWTL HCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECC >Mature Secondary Structure PSVTRPANQPGEFLVDYEEKVFPDVKAEPGEKALLTFHTVAFEGSIGLVNLLQASRLIN CCCCCCCCCCCCEEEECHHHHCCCCCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHH KGFETSILLYGPGVTLGLQRGFPKLGDAAFDGHLNFNARLEKFMGQGGKVYACRFALQAL CCCCCEEEEECCCEEEECCCCCCCCCCCEECCCCCCHHHHHHHHCCCCCEEHHHHHHHHH YGHGEGALTPGIKPISPLDVLDIVLMHRKEGAFILDTWTL HCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA