Definition Prochlorococcus marinus str. MIT 9301, complete genome.
Accession NC_009091
Length 1,641,879

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The map label for this gene is yfeJ [H]

Identifier: 126696647

GI number: 126696647

Start: 1096538

End: 1097275

Strand: Direct

Name: yfeJ [H]

Synonym: P9301_13091

Alternate gene names: 126696647

Gene position: 1096538-1097275 (Clockwise)

Preceding gene: 126696646

Following gene: 126696650

Centisome position: 66.79

GC content: 31.44

Gene sequence:

>738_bases
ATGAATGCAATAAGACGCCTATTAGTTTTGCAGCATTTAGAAATAGAGGGGCCAGGTCTTTTTGAACAATTTGCTAAAGA
GAGAGATTTAAAAATAGAAATTATTCGTTTAGATAATAAAAATGCTCTACCTCAAACAAAAAAAGGCGACTTAATTTTAA
TTATGGGCGGACCAATGGGAGTTAAAGATATTGGAAGAGAGAGATATCCATGGCTTAAGTTAGAAAGAGATTTTATAAAA
AAAGAATTAGAAAATGAAAGACCTATAATCGGTGTCTGCTTAGGTGCTCAATTGCTTGCGAATGCTGCTGGAGGAGATGT
AGAGATTCTTAAATATGGATCACCTCCAAGAGCATTACCAGAAATTGGATGGTCCCAAATTTTTATAGACAAATCGAATA
AAGACTTTAAAGCACTGTTTGAAGACCCTTTTCATGTACTACATTGGCATGGAGATAGGATTTTATTACCTAATAAAGCA
GTACTCATTGCTAGTAGTGCACGTTGTAAGGAACAATTTTTTAGGATTGGTAATTTTGCTTACGGATTACAATTCCATAT
AGAGACGACGGGGAAAATGATAAATAAATGGATTAAAGAAGATAAAGAGTTTGTCATTAAAGGATTAGGCTTAAATGGTC
AGGAAATTTTAAAGGAAGAGAATAAAAAATATATTGATAAAACTTTTTCAAAAAGAAAGCTTCTAATAAGTAAATTATTT
GAATTATTAGATAATTAA

Upstream 100 bases:

>100_bases
TAAGTATTGCAGCAGGTACATACCAAGAAGATACTTGGTCGGCAATGAAGTGGTTTAGCGTTAATGTCTGTTCTGAATCA
GCTGAAATAATGGAAAGCGA

Downstream 100 bases:

>100_bases
AAGAGAATAATAATCCAGTAAAAAAGGGCTTGATAAAGCCCTCAAAAAATTTAAAAAGGATTTTTATTAGAAAATACCTG
GAAGAATTTGACCAGTAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MNAIRRLLVLQHLEIEGPGLFEQFAKERDLKIEIIRLDNKNALPQTKKGDLILIMGGPMGVKDIGRERYPWLKLERDFIK
KELENERPIIGVCLGAQLLANAAGGDVEILKYGSPPRALPEIGWSQIFIDKSNKDFKALFEDPFHVLHWHGDRILLPNKA
VLIASSARCKEQFFRIGNFAYGLQFHIETTGKMINKWIKEDKEFVIKGLGLNGQEILKEENKKYIDKTFSKRKLLISKLF
ELLDN

Sequences:

>Translated_245_residues
MNAIRRLLVLQHLEIEGPGLFEQFAKERDLKIEIIRLDNKNALPQTKKGDLILIMGGPMGVKDIGRERYPWLKLERDFIK
KELENERPIIGVCLGAQLLANAAGGDVEILKYGSPPRALPEIGWSQIFIDKSNKDFKALFEDPFHVLHWHGDRILLPNKA
VLIASSARCKEQFFRIGNFAYGLQFHIETTGKMINKWIKEDKEFVIKGLGLNGQEILKEENKKYIDKTFSKRKLLISKLF
ELLDN
>Mature_245_residues
MNAIRRLLVLQHLEIEGPGLFEQFAKERDLKIEIIRLDNKNALPQTKKGDLILIMGGPMGVKDIGRERYPWLKLERDFIK
KELENERPIIGVCLGAQLLANAAGGDVEILKYGSPPRALPEIGWSQIFIDKSNKDFKALFEDPFHVLHWHGDRILLPNKA
VLIASSARCKEQFFRIGNFAYGLQFHIETTGKMINKWIKEDKEFVIKGLGLNGQEILKEENKKYIDKTFSKRKLLISKLF
ELLDN

Specific function: Unknown

COG id: COG0518

COG function: function code F; GMP synthase - Glutamine amidotransferase domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017926
- InterPro:   IPR000991 [H]

Pfam domain/function: PF00117 GATase [H]

EC number: NA

Molecular weight: Translated: 28180; Mature: 28180

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: PS00442 GATASE_TYPE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAIRRLLVLQHLEIEGPGLFEQFAKERDLKIEIIRLDNKNALPQTKKGDLILIMGGPMG
CHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCC
VKDIGRERYPWLKLERDFIKKELENERPIIGVCLGAQLLANAAGGDVEILKYGSPPRALP
HHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCCCCEEEEEECCCCCCHH
EIGWSQIFIDKSNKDFKALFEDPFHVLHWHGDRILLPNKAVLIASSARCKEQFFRIGNFA
HCCCEEEEEECCCCHHHHHHCCCCEEEEECCCEEECCCCEEEEECCHHHHHHHHHHCCEE
YGLQFHIETTGKMINKWIKEDKEFVIKGLGLNGQEILKEENKKYIDKTFSKRKLLISKLF
EEEEEEEEHHHHHHHHHHHCCHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELLDN
HHHCC
>Mature Secondary Structure
MNAIRRLLVLQHLEIEGPGLFEQFAKERDLKIEIIRLDNKNALPQTKKGDLILIMGGPMG
CHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCC
VKDIGRERYPWLKLERDFIKKELENERPIIGVCLGAQLLANAAGGDVEILKYGSPPRALP
HHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCCCCEEEEEECCCCCCHH
EIGWSQIFIDKSNKDFKALFEDPFHVLHWHGDRILLPNKAVLIASSARCKEQFFRIGNFA
HCCCEEEEEECCCCHHHHHHCCCCEEEEECCCEEECCCCEEEEECCHHHHHHHHHHCCEE
YGLQFHIETTGKMINKWIKEDKEFVIKGLGLNGQEILKEENKKYIDKTFSKRKLLISKLF
EEEEEEEEHHHHHHHHHHHCCHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELLDN
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7612925; 11677609 [H]