| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is folD
Identifier: 126696513
GI number: 126696513
Start: 988125
End: 989021
Strand: Direct
Name: folD
Synonym: P9301_11751
Alternate gene names: 126696513
Gene position: 988125-989021 (Clockwise)
Preceding gene: 126696511
Following gene: 126696514
Centisome position: 60.18
GC content: 32.33
Gene sequence:
>897_bases ATGTCATTAAAATTAGACGGTAAAAAATTATCCCTTGAAATTGAGGAGAGATTAAATGAATATATTTCTAGTAATAAAGA AATTGCAAAAAGAGCTCCTGGTTTAGCTGTGATAAGAATAGGTGAAGACCCAGCAAGTGGTGTTTACGTTAATAATAAGG AAAAAGCATGTTCAAGGGTAGGAATAAAAAGCTTCATATTTCATCTAAAAGATAATATAGAGCAAAAAGAAGTTGAACAA TTAATAAACAAACTAAACTTAGACAAGAATATAGATGGAATGTTGCTACAACTTCCCATCCCAAAGAAGTTTGATGAGCA AAAACTAATCAGCCATATTAATCCAAGCAAAGATGTAGATGGATTAAATGAGATAAACATCGGGAAATTAGTGAAAAATG AGCCTGCGATGAGATCATGTACACCAGCAGGAATTATTAATTTATTAAGATCCCAAAATATTAAAATTGAAGGCAAGAAA ATTGTTGTTGTAGGAAGAAGTTTGCTTGTTGGGAAACCCCTATCGCTTATGTTGTTGAATCTAAATGGCACGGTAACAAT GACTCATTCAAAAACATTAAATTTGAATAAAGTCTGTAGAGAAGCCGACATACTAATTGCGGCTGCAGGAAAACCCAATC TCATAGATTCTAGTTTTGTGAAAGAAGGAGCAATAATAATTGATGTTGGAATACATAGATTAAAAAGTTCCAATAAAAAT CAAACCAGATTATGTGGCGATGTATTATTAGAAGATGTCATTTCTAAAGTATTTGCATACACACCTGTACCAGGAGGCGT TGGACCAATGACCGTAACAATGTTACTTGTGAATACTATTTTTAGCTGGCAAAAACAATTTGGTTTATCATCAAATCTTA ATGATCTTTTGCCATAA
Upstream 100 bases:
>100_bases TTTAAAGTAGATGTGATGTTTTGCACAGAATATGATTAAATCTATTTGAATAATTTAAAATTATAGGCATCCTAGATGTA AAAAGGAGATCTTTTCATAA
Downstream 100 bases:
>100_bases ACTCCAAGATGAAAAATTTTTTACTAAAAGGATAAAATGACTAAAGTAATAAATAGCTATGATTTTGAAAAATATCTTAA ACAAACAAAAAAGGTTATAG
Product: bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase
Products: NA
Alternate protein names: Methylenetetrahydrofolate dehydrogenase; Methenyltetrahydrofolate cyclohydrolase
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MSLKLDGKKLSLEIEERLNEYISSNKEIAKRAPGLAVIRIGEDPASGVYVNNKEKACSRVGIKSFIFHLKDNIEQKEVEQ LINKLNLDKNIDGMLLQLPIPKKFDEQKLISHINPSKDVDGLNEINIGKLVKNEPAMRSCTPAGIINLLRSQNIKIEGKK IVVVGRSLLVGKPLSLMLLNLNGTVTMTHSKTLNLNKVCREADILIAAAGKPNLIDSSFVKEGAIIIDVGIHRLKSSNKN QTRLCGDVLLEDVISKVFAYTPVPGGVGPMTVTMLLVNTIFSWQKQFGLSSNLNDLLP
Sequences:
>Translated_298_residues MSLKLDGKKLSLEIEERLNEYISSNKEIAKRAPGLAVIRIGEDPASGVYVNNKEKACSRVGIKSFIFHLKDNIEQKEVEQ LINKLNLDKNIDGMLLQLPIPKKFDEQKLISHINPSKDVDGLNEINIGKLVKNEPAMRSCTPAGIINLLRSQNIKIEGKK IVVVGRSLLVGKPLSLMLLNLNGTVTMTHSKTLNLNKVCREADILIAAAGKPNLIDSSFVKEGAIIIDVGIHRLKSSNKN QTRLCGDVLLEDVISKVFAYTPVPGGVGPMTVTMLLVNTIFSWQKQFGLSSNLNDLLP >Mature_297_residues SLKLDGKKLSLEIEERLNEYISSNKEIAKRAPGLAVIRIGEDPASGVYVNNKEKACSRVGIKSFIFHLKDNIEQKEVEQL INKLNLDKNIDGMLLQLPIPKKFDEQKLISHINPSKDVDGLNEINIGKLVKNEPAMRSCTPAGIINLLRSQNIKIEGKKI VVVGRSLLVGKPLSLMLLNLNGTVTMTHSKTLNLNKVCREADILIAAAGKPNLIDSSFVKEGAIIIDVGIHRLKSSNKNQ TRLCGDVLLEDVISKVFAYTPVPGGVGPMTVTMLLVNTIFSWQKQFGLSSNLNDLLP
Specific function: Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
COG id: COG0190
COG function: function code H; 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family
Homologues:
Organism=Homo sapiens, GI94721354, Length=296, Percent_Identity=41.554054054054, Blast_Score=206, Evalue=3e-53, Organism=Homo sapiens, GI222418558, Length=292, Percent_Identity=39.3835616438356, Blast_Score=199, Evalue=3e-51, Organism=Homo sapiens, GI222136639, Length=287, Percent_Identity=38.3275261324042, Blast_Score=197, Evalue=1e-50, Organism=Homo sapiens, GI36796743, Length=199, Percent_Identity=28.643216080402, Blast_Score=74, Evalue=1e-13, Organism=Escherichia coli, GI1786741, Length=276, Percent_Identity=43.4782608695652, Blast_Score=239, Evalue=2e-64, Organism=Caenorhabditis elegans, GI17568735, Length=268, Percent_Identity=39.5522388059701, Blast_Score=177, Evalue=5e-45, Organism=Saccharomyces cerevisiae, GI6319558, Length=298, Percent_Identity=40.2684563758389, Blast_Score=213, Evalue=3e-56, Organism=Saccharomyces cerevisiae, GI6321643, Length=299, Percent_Identity=38.7959866220736, Blast_Score=209, Evalue=4e-55, Organism=Saccharomyces cerevisiae, GI6322933, Length=320, Percent_Identity=25.3125, Blast_Score=81, Evalue=2e-16, Organism=Drosophila melanogaster, GI17136818, Length=297, Percent_Identity=40.7407407407407, Blast_Score=215, Evalue=3e-56, Organism=Drosophila melanogaster, GI17136816, Length=297, Percent_Identity=40.7407407407407, Blast_Score=214, Evalue=4e-56, Organism=Drosophila melanogaster, GI62472483, Length=283, Percent_Identity=37.1024734982332, Blast_Score=191, Evalue=6e-49, Organism=Drosophila melanogaster, GI45551871, Length=283, Percent_Identity=37.1024734982332, Blast_Score=191, Evalue=6e-49, Organism=Drosophila melanogaster, GI24645718, Length=283, Percent_Identity=37.1024734982332, Blast_Score=190, Evalue=8e-49, Organism=Drosophila melanogaster, GI17137370, Length=283, Percent_Identity=37.1024734982332, Blast_Score=190, Evalue=8e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FOLD_PROM0 (A3PDH3)
Other databases:
- EMBL: CP000576 - RefSeq: YP_001091399.1 - ProteinModelPortal: A3PDH3 - SMR: A3PDH3 - STRING: A3PDH3 - GeneID: 4911923 - GenomeReviews: CP000576_GR - KEGG: pmg:P9301_11751 - eggNOG: COG0190 - HOGENOM: HBG328751 - OMA: DVVYETA - ProtClustDB: PRK14186 - BioCyc: PMAR167546:P9301ORF_1196-MONOMER - GO: GO:0005488 - HAMAP: MF_01576 - InterPro: IPR016040 - InterPro: IPR000672 - InterPro: IPR020630 - InterPro: IPR020867 - InterPro: IPR020631 - Gene3D: G3DSA:3.40.50.720 - PRINTS: PR00085
Pfam domain/function: PF00763 THF_DHG_CYH; PF02882 THF_DHG_CYH_C
EC number: =1.5.1.5; =3.5.4.9
Molecular weight: Translated: 32768; Mature: 32637
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: PS00766 THF_DHG_CYH_1; PS00767 THF_DHG_CYH_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLKLDGKKLSLEIEERLNEYISSNKEIAKRAPGLAVIRIGEDPASGVYVNNKEKACSRV CCEECCCCEEEEEHHHHHHHHHHCCHHHHHHCCCEEEEEECCCCCCCEEECCHHHHHHHH GIKSFIFHLKDNIEQKEVEQLINKLNLDKNIDGMLLQLPIPKKFDEQKLISHINPSKDVD HHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHCCCCCCCC GLNEINIGKLVKNEPAMRSCTPAGIINLLRSQNIKIEGKKIVVVGRSLLVGKPLSLMLLN CCCCCCHHHHHCCCCCHHCCCHHHHHHHHHCCCEEECCCEEEEEECHHHHCCCCEEEEEE LNGTVTMTHSKTLNLNKVCREADILIAAAGKPNLIDSSFVKEGAIIIDVGIHRLKSSNKN CCCEEEEEECCCCCHHHHHHHCCEEEEECCCCCCCCHHHHHCCCEEEEECHHHHHCCCCC QTRLCGDVLLEDVISKVFAYTPVPGGVGPMTVTMLLVNTIFSWQKQFGLSSNLNDLLP HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCC >Mature Secondary Structure SLKLDGKKLSLEIEERLNEYISSNKEIAKRAPGLAVIRIGEDPASGVYVNNKEKACSRV CEECCCCEEEEEHHHHHHHHHHCCHHHHHHCCCEEEEEECCCCCCCEEECCHHHHHHHH GIKSFIFHLKDNIEQKEVEQLINKLNLDKNIDGMLLQLPIPKKFDEQKLISHINPSKDVD HHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHCCCCCCCC GLNEINIGKLVKNEPAMRSCTPAGIINLLRSQNIKIEGKKIVVVGRSLLVGKPLSLMLLN CCCCCCHHHHHCCCCCHHCCCHHHHHHHHHCCCEEECCCEEEEEECHHHHCCCCEEEEEE LNGTVTMTHSKTLNLNKVCREADILIAAAGKPNLIDSSFVKEGAIIIDVGIHRLKSSNKN CCCEEEEEECCCCCHHHHHHHCCEEEEECCCCCCCCHHHHHCCCEEEEECHHHHHCCCCC QTRLCGDVLLEDVISKVFAYTPVPGGVGPMTVTMLLVNTIFSWQKQFGLSSNLNDLLP HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA