Click here to switch to the map view.

The map label for this gene is 126696474

Identifier: 126696474

GI number: 126696474

Start: 955525

End: 956598

Strand: Direct

Name: 126696474

Synonym: P9301_11361

Alternate gene names: NA

Gene position: 955525-956598 (Clockwise)

Preceding gene: 126696473

Following gene: 126696477

Centisome position: 58.2

GC content: 40.41

Gene sequence:

>1074_bases
ATGCCTGATATAGAACCATTTAGCCCAAGAGGCATGTTCCATGAAGGATGGACTGCTGAAGTTAGCGATTATGCCATAGC
ATGTGGTTGGGCTCTTAAAGGGAAACAATTTATTGTTGGCGACGTGGCAGGTGGTATTTTTGCATTCGAAGGAGATACTG
GAAAAATTATTTGGAAAAAAGAAAATACACACTCCGGTGGTCTATTAGCAATGTCCATTCATCCAGAGGGCGAGATTTTT
GCAACATCAGGTCAGGATGGAAATGTTCAAATTTGTAATTGCCACGAGGGTAAAGTAATTAAAACACTTAATCTTGGTAA
GGGTTGGGTAGAACACCTCAAGTGGTCTAATGACGGTTTGTTTCTAGCGATAGCTTCCTCAAAAAAAGTATATGTTTTTA
ATGAAATTGGAGAAGAGAAATGGATCTCAGAAGACCATCCAAGCACAGTAAGTGCAATAACATGGTCAAATAAAAATGAG
CTTGCAACTGCATGCTACGGAAGAGTGACATTCTTTGACATTGTTAAAAATAAAACGAATCAAAAACTGGAGTGGCAAGG
ATCATTGGTCTCTATGGAATTAAGCCCTGATGGAGATATAGTCGCCTGTGGTAGTCAAGACAATTCAGTTCATTTTTGGA
GAAGATCAACAGGAATGGATGCTGAAATGACTGGATACCCTGGAAAACCAAGTCACCTTTCTTTTGATGACAGCGGAAAA
TTATTAGCGACTAGCGGCAGTGAAAGAATTACAGTATGGAGCTTTATAGGCAATGGTCCAGAAGGGACTATGCCAGGAGA
GCTATGTCACCATACAGAACCTATTTCGAGCTTAGCCTTTTCAAATAAAGGTATGCTTGTAGCCTCAGGATCTAGGGATG
GTTCTGTTGTCGCAAGTTTCCTAAAAAATGACGGCAATGGAGACCCAGTTGGGGCTGCATTCGCCGGAGATTTGGTAGGG
GCAATATCATGGAGACCTGATGATTGTGCACTTGCAGCAGTTAATGCAAAAGGTGTTGTAAATGTATGGAAATTTAAAGT
TCGTACTAACTTTTTTTCAAAGGGATTTAAGTAA

Upstream 100 bases:

>100_bases
CACAACCTGATAAAGAATGGGGTAACGAACCTCGTAGAAATCAACTTGTTTTTATCGGTAGAAATTTAAATGAGAAAGAG
ATGCAAGAAGGCTTTGATAA

Downstream 100 bases:

>100_bases
AAAGTAGAAATTTATTAATTACCAATAGTTAGCTTTTAAATGTCTTTCCATACATATGACCTCACAGTCATTATCTATCC
CTTTTGGGTGAATATCGCAA

Product: WD-40 repeat-containing G-protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 356

Protein sequence:

>357_residues
MPDIEPFSPRGMFHEGWTAEVSDYAIACGWALKGKQFIVGDVAGGIFAFEGDTGKIIWKKENTHSGGLLAMSIHPEGEIF
ATSGQDGNVQICNCHEGKVIKTLNLGKGWVEHLKWSNDGLFLAIASSKKVYVFNEIGEEKWISEDHPSTVSAITWSNKNE
LATACYGRVTFFDIVKNKTNQKLEWQGSLVSMELSPDGDIVACGSQDNSVHFWRRSTGMDAEMTGYPGKPSHLSFDDSGK
LLATSGSERITVWSFIGNGPEGTMPGELCHHTEPISSLAFSNKGMLVASGSRDGSVVASFLKNDGNGDPVGAAFAGDLVG
AISWRPDDCALAAVNAKGVVNVWKFKVRTNFFSKGFK

Sequences:

>Translated_357_residues
MPDIEPFSPRGMFHEGWTAEVSDYAIACGWALKGKQFIVGDVAGGIFAFEGDTGKIIWKKENTHSGGLLAMSIHPEGEIF
ATSGQDGNVQICNCHEGKVIKTLNLGKGWVEHLKWSNDGLFLAIASSKKVYVFNEIGEEKWISEDHPSTVSAITWSNKNE
LATACYGRVTFFDIVKNKTNQKLEWQGSLVSMELSPDGDIVACGSQDNSVHFWRRSTGMDAEMTGYPGKPSHLSFDDSGK
LLATSGSERITVWSFIGNGPEGTMPGELCHHTEPISSLAFSNKGMLVASGSRDGSVVASFLKNDGNGDPVGAAFAGDLVG
AISWRPDDCALAAVNAKGVVNVWKFKVRTNFFSKGFK
>Mature_356_residues
PDIEPFSPRGMFHEGWTAEVSDYAIACGWALKGKQFIVGDVAGGIFAFEGDTGKIIWKKENTHSGGLLAMSIHPEGEIFA
TSGQDGNVQICNCHEGKVIKTLNLGKGWVEHLKWSNDGLFLAIASSKKVYVFNEIGEEKWISEDHPSTVSAITWSNKNEL
ATACYGRVTFFDIVKNKTNQKLEWQGSLVSMELSPDGDIVACGSQDNSVHFWRRSTGMDAEMTGYPGKPSHLSFDDSGKL
LATSGSERITVWSFIGNGPEGTMPGELCHHTEPISSLAFSNKGMLVASGSRDGSVVASFLKNDGNGDPVGAAFAGDLVGA
ISWRPDDCALAAVNAKGVVNVWKFKVRTNFFSKGFK

Specific function: Unknown

COG id: COG2319

COG function: function code R; FOG: WD40 repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 13 WD repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020472
- InterPro:   IPR011600
- InterPro:   IPR015943
- InterPro:   IPR001680
- InterPro:   IPR011046
- InterPro:   IPR019782
- InterPro:   IPR019775
- InterPro:   IPR017986
- InterPro:   IPR019781 [H]

Pfam domain/function: PF00656 Peptidase_C14; PF00400 WD40 [H]

EC number: NA

Molecular weight: Translated: 38570; Mature: 38438

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: PS50082 WD_REPEATS_2 ; PS50294 WD_REPEATS_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDIEPFSPRGMFHEGWTAEVSDYAIACGWALKGKQFIVGDVAGGIFAFEGDTGKIIWKK
CCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCEEEEEECCCCEEEEECCCCEEEEEE
ENTHSGGLLAMSIHPEGEIFATSGQDGNVQICNCHEGKVIKTLNLGKGWVEHLKWSNDGL
CCCCCCCEEEEEECCCCCEEEECCCCCCEEEEECCCCCEEEEEECCCHHHHHEEECCCCE
FLAIASSKKVYVFNEIGEEKWISEDHPSTVSAITWSNKNELATACYGRVTFFDIVKNKTN
EEEEECCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEEHHHCCEEEEEEHHCCCC
QKLEWQGSLVSMELSPDGDIVACGSQDNSVHFWRRSTGMDAEMTGYPGKPSHLSFDDSGK
CEEEECCCEEEEEECCCCCEEEECCCCCCEEEEEECCCCCCEECCCCCCCCEECCCCCCC
LLATSGSERITVWSFIGNGPEGTMPGELCHHTEPISSLAFSNKGMLVASGSRDGSVVASF
EEEECCCCEEEEEEEECCCCCCCCCHHHHHCCCCHHHHHCCCCCEEEECCCCCHHHHHHH
LKNDGNGDPVGAAFAGDLVGAISWRPDDCALAAVNAKGVVNVWKFKVRTNFFSKGFK
HHCCCCCCCCCHHHHCCCEEEEECCCCCEEEEEECCCCEEEEEEEEEEECHHHCCCC
>Mature Secondary Structure 
PDIEPFSPRGMFHEGWTAEVSDYAIACGWALKGKQFIVGDVAGGIFAFEGDTGKIIWKK
CCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCEEEEEECCCCEEEEECCCCEEEEEE
ENTHSGGLLAMSIHPEGEIFATSGQDGNVQICNCHEGKVIKTLNLGKGWVEHLKWSNDGL
CCCCCCCEEEEEECCCCCEEEECCCCCCEEEEECCCCCEEEEEECCCHHHHHEEECCCCE
FLAIASSKKVYVFNEIGEEKWISEDHPSTVSAITWSNKNELATACYGRVTFFDIVKNKTN
EEEEECCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEEHHHCCEEEEEEHHCCCC
QKLEWQGSLVSMELSPDGDIVACGSQDNSVHFWRRSTGMDAEMTGYPGKPSHLSFDDSGK
CEEEECCCEEEEEECCCCCEEEECCCCCCEEEEEECCCCCCEECCCCCCCCEECCCCCCC
LLATSGSERITVWSFIGNGPEGTMPGELCHHTEPISSLAFSNKGMLVASGSRDGSVVASF
EEEECCCCEEEEEEEECCCCCCCCCHHHHHCCCCHHHHHCCCCCEEEECCCCCHHHHHHH
LKNDGNGDPVGAAFAGDLVGAISWRPDDCALAAVNAKGVVNVWKFKVRTNFFSKGFK
HHCCCCCCCCCHHHHCCCEEEEECCCCCEEEEEECCCCEEEEEEEEEEECHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]