| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is pniL34
Identifier: 126696362
GI number: 126696362
Start: 882965
End: 884137
Strand: Direct
Name: pniL34
Synonym: P9301_10241
Alternate gene names: 126696362
Gene position: 882965-884137 (Clockwise)
Preceding gene: 126696361
Following gene: 126696363
Centisome position: 53.78
GC content: 32.31
Gene sequence:
>1173_bases ATGTCTCAATCAACTATTGAATCTACAAATAAAAAAGAAATAAATAAAGGAAAAGCCCCAGCAAAGGAGACAATTTTGTC CCCAAGATTCTATACAACAGACTTTGAGGCAATGGAAAATATGGATTTATCAATAAACGAGGAAGAATTGGAAGCTATAT GTGAGGAATTTAGGAAAGATTACAACAGGCATCATTTTGTAAGAAATAGTGAATTTGAAGGGGCTGCAGAAAAATTGGAT CCTGAGACAAGAGAGCTCTTTGTTGATTTTCTTGAGGGAAGTTGTACTTCAGAATTCTCAGGTTTTTTACTTTATAAGGA ACTTAGCAAGAGGATTAAAGACAAAAACCCTCTTCTTGCTGAATGTTTTGCTCATATGGCAAGAGATGAAGCTAGACATG CAGGGTTTTTGAATAAATCAATGAGTGATTTTGGACTGCAGTTAGATCTAGGTTTTTTAACAGCAAATAAGGATTATACT TATTTCCCACCACGAAGTATTTTTTACGCCACTTATTTATCCGAAAAAATAGGTTATTGGAGATACATAGCAATTTATAG GCATCTCGAAAAGAACCCAAATAGCAAAATTTTTCCACTGTTTAATTACTTTGAGAATTGGTGTCAAGATGAAAATAGGC ATGGTGATTTCTTTGACGCATTAATGAAAGCACAACCACGTACTGTTAAATCATTAAGTCAAAAAATAACCATTGGTGGC TCTACCTTTACACATCCACTATTTGACTATTTCCATAGATTTAGATACTTCTTAAACAATCTTCCATTAACATCCAAGTT ATGGTCTAGGTTTTTCTTACTTGCTGTATTTGCAACCATGTATGCTAGAGATTTGGGAATTAAAAAAGATTTCTACAGTT CATTAGGTTTAGATGCCAGAGATTACGACCAATTTGTTATTAATAAAACGAATGAAACTGCAGCTAGAGTTTTCCCTGTA GTAATGGACGTTAATAATAAATCCTTTTATGGAAGATTAGATAAAATAGTAGAAAATAATAAGATTCTTTCCGATATTGC AAGCGGTACTGGAAATAAAGTATCTAAAACTTTTAGAAAAGTACCTAAATATTTATCAAACGGTTACCAGTTATTAAGAC TATACTTATTAAAACCTCTAGATAGCAAAGATTACCAACCTTCAATTAGATAA
Upstream 100 bases:
>100_bases AAATTGATAGGAGTTAATTAAAGAAAGAATAACACCAAGTTAACTTTTCCCTCGAAAATACAAATAATGGTAAATAATAG TATTAATAAAACAGTTAAAG
Downstream 100 bases:
>100_bases TCTTTCATACAGAGAAGACATATAGACTCAAATGCTTTCGTCACAAATCAAATCAAATGAAATAGTTTTTGGTAGTTGCA ATAAAGATTTATTAGAAGAA
Product: magnesium-protoporphyrin IX monomethyl ester cyclase
Products: NA
Alternate protein names: Mg-protoporphyrin IX monomethyl ester oxidative cyclase
Number of amino acids: Translated: 390; Mature: 389
Protein sequence:
>390_residues MSQSTIESTNKKEINKGKAPAKETILSPRFYTTDFEAMENMDLSINEEELEAICEEFRKDYNRHHFVRNSEFEGAAEKLD PETRELFVDFLEGSCTSEFSGFLLYKELSKRIKDKNPLLAECFAHMARDEARHAGFLNKSMSDFGLQLDLGFLTANKDYT YFPPRSIFYATYLSEKIGYWRYIAIYRHLEKNPNSKIFPLFNYFENWCQDENRHGDFFDALMKAQPRTVKSLSQKITIGG STFTHPLFDYFHRFRYFLNNLPLTSKLWSRFFLLAVFATMYARDLGIKKDFYSSLGLDARDYDQFVINKTNETAARVFPV VMDVNNKSFYGRLDKIVENNKILSDIASGTGNKVSKTFRKVPKYLSNGYQLLRLYLLKPLDSKDYQPSIR
Sequences:
>Translated_390_residues MSQSTIESTNKKEINKGKAPAKETILSPRFYTTDFEAMENMDLSINEEELEAICEEFRKDYNRHHFVRNSEFEGAAEKLD PETRELFVDFLEGSCTSEFSGFLLYKELSKRIKDKNPLLAECFAHMARDEARHAGFLNKSMSDFGLQLDLGFLTANKDYT YFPPRSIFYATYLSEKIGYWRYIAIYRHLEKNPNSKIFPLFNYFENWCQDENRHGDFFDALMKAQPRTVKSLSQKITIGG STFTHPLFDYFHRFRYFLNNLPLTSKLWSRFFLLAVFATMYARDLGIKKDFYSSLGLDARDYDQFVINKTNETAARVFPV VMDVNNKSFYGRLDKIVENNKILSDIASGTGNKVSKTFRKVPKYLSNGYQLLRLYLLKPLDSKDYQPSIR >Mature_389_residues SQSTIESTNKKEINKGKAPAKETILSPRFYTTDFEAMENMDLSINEEELEAICEEFRKDYNRHHFVRNSEFEGAAEKLDP ETRELFVDFLEGSCTSEFSGFLLYKELSKRIKDKNPLLAECFAHMARDEARHAGFLNKSMSDFGLQLDLGFLTANKDYTY FPPRSIFYATYLSEKIGYWRYIAIYRHLEKNPNSKIFPLFNYFENWCQDENRHGDFFDALMKAQPRTVKSLSQKITIGGS TFTHPLFDYFHRFRYFLNNLPLTSKLWSRFFLLAVFATMYARDLGIKKDFYSSLGLDARDYDQFVINKTNETAARVFPVV MDVNNKSFYGRLDKIVENNKILSDIASGTGNKVSKTFRKVPKYLSNGYQLLRLYLLKPLDSKDYQPSIR
Specific function: Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomet
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AcsF family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ACSF_PROM0 (A3PD22)
Other databases:
- EMBL: CP000576 - RefSeq: YP_001091248.1 - STRING: A3PD22 - GeneID: 4912750 - GenomeReviews: CP000576_GR - KEGG: pmg:P9301_10241 - eggNOG: NOG10633 - HOGENOM: HBG284843 - OMA: HGDFFDA - ProtClustDB: PRK13654 - BioCyc: PMAR167546:P9301ORF_1044-MONOMER - GO: GO:0015979 - HAMAP: MF_01840 - InterPro: IPR008434 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR003251 - Gene3D: G3DSA:1.20.1260.10 - TIGRFAMs: TIGR02029
Pfam domain/function: PF02915 Rubrerythrin; SSF47240 Ferritin/RR_like
EC number: =1.14.13.81
Molecular weight: Translated: 45600; Mature: 45469
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSTIESTNKKEINKGKAPAKETILSPRFYTTDFEAMENMDLSINEEELEAICEEFRKD CCCCHHCCCCHHHHHCCCCCHHHHHCCCCEECCCHHHHHCCCCCCCHHHHHHHHHHHHHH YNRHHFVRNSEFEGAAEKLDPETRELFVDFLEGSCTSEFSGFLLYKELSKRIKDKNPLLA HHHHHCCCCCCCCCHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHH ECFAHMARDEARHAGFLNKSMSDFGLQLDLGFLTANKDYTYFPPRSIFYATYLSEKIGYW HHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEEEEECCCCEECCCHHHHHHHHHHHHHHHH RYIAIYRHLEKNPNSKIFPLFNYFENWCQDENRHGDFFDALMKAQPRTVKSLSQKITIGG HHHHHHHHHHCCCCCCEEHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHEEEECC STFTHPLFDYFHRFRYFLNNLPLTSKLWSRFFLLAVFATMYARDLGIKKDFYSSLGLDAR CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHH DYDQFVINKTNETAARVFPVVMDVNNKSFYGRLDKIVENNKILSDIASGTGNKVSKTFRK CCCHHHCCCCCCHHHHHEEHEEECCCCHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHH VPKYLSNGYQLLRLYLLKPLDSKDYQPSIR HHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SQSTIESTNKKEINKGKAPAKETILSPRFYTTDFEAMENMDLSINEEELEAICEEFRKD CCCHHCCCCHHHHHCCCCCHHHHHCCCCEECCCHHHHHCCCCCCCHHHHHHHHHHHHHH YNRHHFVRNSEFEGAAEKLDPETRELFVDFLEGSCTSEFSGFLLYKELSKRIKDKNPLLA HHHHHCCCCCCCCCHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHH ECFAHMARDEARHAGFLNKSMSDFGLQLDLGFLTANKDYTYFPPRSIFYATYLSEKIGYW HHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEEEEECCCCEECCCHHHHHHHHHHHHHHHH RYIAIYRHLEKNPNSKIFPLFNYFENWCQDENRHGDFFDALMKAQPRTVKSLSQKITIGG HHHHHHHHHHCCCCCCEEHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHEEEECC STFTHPLFDYFHRFRYFLNNLPLTSKLWSRFFLLAVFATMYARDLGIKKDFYSSLGLDAR CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHH DYDQFVINKTNETAARVFPVVMDVNNKSFYGRLDKIVENNKILSDIASGTGNKVSKTFRK CCCHHHCCCCCCHHHHHEEHEEECCCCHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHH VPKYLSNGYQLLRLYLLKPLDSKDYQPSIR HHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA