| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is 126696083
Identifier: 126696083
GI number: 126696083
Start: 660308
End: 660598
Strand: Direct
Name: 126696083
Synonym: P9301_07451
Alternate gene names: NA
Gene position: 660308-660598 (Clockwise)
Preceding gene: 126696077
Following gene: 126696093
Centisome position: 40.22
GC content: 31.62
Gene sequence:
>291_bases ATGACTTCAGGAGTCGCTAATGTTCGGACTTATTTTTATTGTGGCAGCTTTATTGACCCCCCAACTGGCTGGTTATTTAA CAAAAAAAGTGGTTTATTAATTTTTTTTGAGAGTTATAAGAAATCTGTATCTAATAACTTAAAAGTATATACTCATCTTT TCTATGCAAATGAATTAGGTGAACCAGCCCAAATTAAAAATTCAAGACTTCATTCTATTGAGTGCGCTTGTGAAACATGG AATGAATTAATTTCAGGAGGTTGGCAAATTGTTACTAATAAATTCCAGTAA
Upstream 100 bases:
>100_bases TATTTCTAGAAAGTAATTTTAGTATTTAAATGATTAGCAGAGGAATACTTGACGTCTACGAATAGTACATTTATATTATT AGTACAAACGTATTATCCTT
Downstream 100 bases:
>100_bases TAATGATCAATGTAAATCCGTCAAAATGGGAATATCTAAAAGAATCTACCCTAAAACGAAAACGAACAAAGATTTGTATT ACTTGCAATCACTTTCGCTA
Product: zinc finger, C2H2 type-like protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MTSGVANVRTYFYCGSFIDPPTGWLFNKKSGLLIFFESYKKSVSNNLKVYTHLFYANELGEPAQIKNSRLHSIECACETW NELISGGWQIVTNKFQ
Sequences:
>Translated_96_residues MTSGVANVRTYFYCGSFIDPPTGWLFNKKSGLLIFFESYKKSVSNNLKVYTHLFYANELGEPAQIKNSRLHSIECACETW NELISGGWQIVTNKFQ >Mature_95_residues TSGVANVRTYFYCGSFIDPPTGWLFNKKSGLLIFFESYKKSVSNNLKVYTHLFYANELGEPAQIKNSRLHSIECACETWN ELISGGWQIVTNKFQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10980; Mature: 10848
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSGVANVRTYFYCGSFIDPPTGWLFNKKSGLLIFFESYKKSVSNNLKVYTHLFYANELG CCCCCCHHEEEEEECCCCCCCCCCEEECCCCEEEEEHHHHHHHCCCEEEEEEEEECCCCC EPAQIKNSRLHSIECACETWNELISGGWQIVTNKFQ CCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCC >Mature Secondary Structure TSGVANVRTYFYCGSFIDPPTGWLFNKKSGLLIFFESYKKSVSNNLKVYTHLFYANELG CCCCCHHEEEEEECCCCCCCCCCEEECCCCEEEEEHHHHHHHCCCEEEEEEEEECCCCC EPAQIKNSRLHSIECACETWNELISGGWQIVTNKFQ CCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA