| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
Click here to switch to the map view.
The map label for this gene is 126696040
Identifier: 126696040
GI number: 126696040
Start: 626844
End: 627281
Strand: Direct
Name: 126696040
Synonym: P9301_07021
Alternate gene names: NA
Gene position: 626844-627281 (Clockwise)
Preceding gene: 126696034
Following gene: 126696041
Centisome position: 38.18
GC content: 31.28
Gene sequence:
>438_bases ATGGTTGTTATTTCTATCATTGGTGTTCTTGCAAGTATAGTAATTCCTAACTTTAGACCTGCAATAGAGTTCATAGAAGT TTTGATTGCAGAAAAGCATCTTTTGAAAGCAGTTAAAGAGTGTCAATTAGGATTAATTAATTATGATATCAGCCCTCAAT ATACTTTGCCTGTAAATGAAGTTAATTTAGGAATTTTTAAAAATAATAAATTTACTTTTTCACATACTGGAATCGGTGGA GATTGTTCTCCTGAATTCGGAGGTAATCAACTTAGAGTTTCAAGAATTGATATCAATTCTGAAAATATAATTTATTCTTT AATCATTAATGTCAAAACTGGCGAGAAATCATCAGAAGGTTCCTTGCCTGATTGGCTCGATTGGTGGGACGGTAAATCAT CAAATTTGATTCCTGATGACGATATGCTTTTAGATTAA
Upstream 100 bases:
>100_bases ACATTCATTTAAAAATGTGCAACTGAATAATATACAAAAAATATCTTTATTGAAAAGATTAATTATTTGTAAACAACTTG GCTACTCAATAAATGAGCTA
Downstream 100 bases:
>100_bases TCTACAAAATAAAAAGTTTGTTTTATAAAAATATATTTATCTAATTTTTATCTTATCCAGGGTGGAATAGGTCCAGAATC TACTTCATCCTCATTAAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MVVISIIGVLASIVIPNFRPAIEFIEVLIAEKHLLKAVKECQLGLINYDISPQYTLPVNEVNLGIFKNNKFTFSHTGIGG DCSPEFGGNQLRVSRIDINSENIIYSLIINVKTGEKSSEGSLPDWLDWWDGKSSNLIPDDDMLLD
Sequences:
>Translated_145_residues MVVISIIGVLASIVIPNFRPAIEFIEVLIAEKHLLKAVKECQLGLINYDISPQYTLPVNEVNLGIFKNNKFTFSHTGIGG DCSPEFGGNQLRVSRIDINSENIIYSLIINVKTGEKSSEGSLPDWLDWWDGKSSNLIPDDDMLLD >Mature_145_residues MVVISIIGVLASIVIPNFRPAIEFIEVLIAEKHLLKAVKECQLGLINYDISPQYTLPVNEVNLGIFKNNKFTFSHTGIGG DCSPEFGGNQLRVSRIDINSENIIYSLIINVKTGEKSSEGSLPDWLDWWDGKSSNLIPDDDMLLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16106; Mature: 16106
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVISIIGVLASIVIPNFRPAIEFIEVLIAEKHLLKAVKECQLGLINYDISPQYTLPVNE CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCEEECCCC VNLGIFKNNKFTFSHTGIGGDCSPEFGGNQLRVSRIDINSENIIYSLIINVKTGEKSSEG EEEEEEECCEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEEEECCCCCCCC SLPDWLDWWDGKSSNLIPDDDMLLD CCCCHHHHCCCCCCCCCCCCCEECC >Mature Secondary Structure MVVISIIGVLASIVIPNFRPAIEFIEVLIAEKHLLKAVKECQLGLINYDISPQYTLPVNE CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCEEECCCC VNLGIFKNNKFTFSHTGIGGDCSPEFGGNQLRVSRIDINSENIIYSLIINVKTGEKSSEG EEEEEEECCEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEEEECCCCCCCC SLPDWLDWWDGKSSNLIPDDDMLLD CCCCHHHHCCCCCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA