| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is por [H]
Identifier: 126695999
GI number: 126695999
Start: 587323
End: 588324
Strand: Direct
Name: por [H]
Synonym: P9301_06611
Alternate gene names: 126695999
Gene position: 587323-588324 (Clockwise)
Preceding gene: 126695996
Following gene: 126696002
Centisome position: 35.77
GC content: 25.55
Gene sequence:
>1002_bases ATGATTAAAAATAAAAATATTTTAATTACTGGAGGTAATTCAGGAATAGGGCTTTTTGCCATTATTAATTTACTGAAGAC GAAAAATATTTTATATGTTGTAATAAAAAACGAATTTAGAAAGAATGAATTTCTCAAAAAAATCGAGAAATATTTTGATA AAAATTACCTTAGTAAATTTTTAAATATTATTGAAAATTGTGATCTTTCAGATCTAGATAATATTAAAAAAATTAAAGAT TACTTTATTAGTAAAAAGATTTTTATAGATATTCTTGTTTTAAATGCAGGATTGCAATATACAGGCTCTTTTTACCCTAA AGTATCAAAACAAGGCATAGAACTAACTTTTGCGGTAAATCATCTTGCACATTTTTACTTGGTAAATGTCCTAAAAGATT TTATTAGAGATATAGAAGAATCTAGAATCATTATTACATCATCAGATGTACACGACCCCAAAAGTTCAGGTGGCAATATA GGAAAGAAAGCGGGACTTAATAACCTAGTTAATTTAAGAAAAAAAGTAACTGGGCAATTTTTAAATTTTAACGCTGATGA AGCTTATAAAAATAGTAAGTTATGTAATATTTTGTTTGCTAAAGAACTCGAAAAAAAATTAAAAATTTCCTCTAGTAAAA TTTCTGTAATTACTTGGGCTCCTGGTCTAGTAATACCAAATGATGATCTCGGTTTTTTTAGATATAGTAAGCGCTTTAAT CTCTTTGGGTATTTAATTTTTTCTAAAGCTGCAAAAAATATTTTAGGAATTTCTGAAAGTATAGAAAATGCTGGTAAGAT ACTTTCTGAAATTGTTCTTGATTCAAATTTAAATAATATTGGTTACGTTCATTTAAGTAATAAACTTATATCTTTTAAGA AACATAAATTAGTTGAAAGTAAGGTTAGTGATGAGGCAAATAATTCTGAGTTAGCTTCAAAACTCTGGATTTTAAGTGAA GAGATTTGTAGATCATTTGGCTTTGTTACTTTCAATATTTAA
Upstream 100 bases:
>100_bases AGTGACTAAGTTTTCAGTGTTTTAACAATAATTTATAAGATTACAAAATAAAAAAAAACTTTATTTATTTTTTTATCATA AAAAAAATATAGGAATTTAA
Downstream 100 bases:
>100_bases GGTTTGTGTTGGGAATGCAAACTCTATATTATTAAACGCAAATTCCTCAATAATTCTTAAATTTATAGATTGTTGCGCTT CCATTGCGGCGAGATAATTA
Product: putative light-dependent protochlorophyllide oxido-reductase
Products: NA
Alternate protein names: PCR; NADPH-protochlorophyllide oxidoreductase; LPOR; POR [H]
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MIKNKNILITGGNSGIGLFAIINLLKTKNILYVVIKNEFRKNEFLKKIEKYFDKNYLSKFLNIIENCDLSDLDNIKKIKD YFISKKIFIDILVLNAGLQYTGSFYPKVSKQGIELTFAVNHLAHFYLVNVLKDFIRDIEESRIIITSSDVHDPKSSGGNI GKKAGLNNLVNLRKKVTGQFLNFNADEAYKNSKLCNILFAKELEKKLKISSSKISVITWAPGLVIPNDDLGFFRYSKRFN LFGYLIFSKAAKNILGISESIENAGKILSEIVLDSNLNNIGYVHLSNKLISFKKHKLVESKVSDEANNSELASKLWILSE EICRSFGFVTFNI
Sequences:
>Translated_333_residues MIKNKNILITGGNSGIGLFAIINLLKTKNILYVVIKNEFRKNEFLKKIEKYFDKNYLSKFLNIIENCDLSDLDNIKKIKD YFISKKIFIDILVLNAGLQYTGSFYPKVSKQGIELTFAVNHLAHFYLVNVLKDFIRDIEESRIIITSSDVHDPKSSGGNI GKKAGLNNLVNLRKKVTGQFLNFNADEAYKNSKLCNILFAKELEKKLKISSSKISVITWAPGLVIPNDDLGFFRYSKRFN LFGYLIFSKAAKNILGISESIENAGKILSEIVLDSNLNNIGYVHLSNKLISFKKHKLVESKVSDEANNSELASKLWILSE EICRSFGFVTFNI >Mature_333_residues MIKNKNILITGGNSGIGLFAIINLLKTKNILYVVIKNEFRKNEFLKKIEKYFDKNYLSKFLNIIENCDLSDLDNIKKIKD YFISKKIFIDILVLNAGLQYTGSFYPKVSKQGIELTFAVNHLAHFYLVNVLKDFIRDIEESRIIITSSDVHDPKSSGGNI GKKAGLNNLVNLRKKVTGQFLNFNADEAYKNSKLCNILFAKELEKKLKISSSKISVITWAPGLVIPNDDLGFFRYSKRFN LFGYLIFSKAAKNILGISESIENAGKILSEIVLDSNLNNIGYVHLSNKLISFKKHKLVESKVSDEANNSELASKLWILSE EICRSFGFVTFNI
Specific function: Phototransformation of protochlorophyllide (Pchlide) to chlorophyllide (Chlide) [H]
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family. POR subfamily [H]
Homologues:
Organism=Homo sapiens, GI7706523, Length=319, Percent_Identity=25.705329153605, Blast_Score=95, Evalue=8e-20, Organism=Homo sapiens, GI166795268, Length=323, Percent_Identity=25.3869969040248, Blast_Score=76, Evalue=6e-14, Organism=Homo sapiens, GI10190746, Length=235, Percent_Identity=26.3829787234043, Blast_Score=73, Evalue=4e-13, Organism=Homo sapiens, GI225579078, Length=323, Percent_Identity=26.9349845201238, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI146231950, Length=234, Percent_Identity=23.9316239316239, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI186928839, Length=326, Percent_Identity=27.9141104294479, Blast_Score=69, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17532791, Length=211, Percent_Identity=33.175355450237, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17532805, Length=240, Percent_Identity=31.25, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17558006, Length=218, Percent_Identity=27.5229357798165, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI193207620, Length=211, Percent_Identity=30.8056872037915, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71992402, Length=206, Percent_Identity=28.6407766990291, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI161076371, Length=226, Percent_Identity=26.5486725663717, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI22024069, Length=222, Percent_Identity=31.5315315315315, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI45553409, Length=233, Percent_Identity=27.8969957081545, Blast_Score=78, Evalue=8e-15, Organism=Drosophila melanogaster, GI24647948, Length=233, Percent_Identity=27.8969957081545, Blast_Score=78, Evalue=8e-15, Organism=Drosophila melanogaster, GI24647946, Length=233, Percent_Identity=27.8969957081545, Blast_Score=78, Evalue=9e-15, Organism=Drosophila melanogaster, GI24586328, Length=321, Percent_Identity=26.4797507788162, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI19921754, Length=219, Percent_Identity=29.2237442922374, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI24647931, Length=237, Percent_Identity=27.8481012658228, Blast_Score=71, Evalue=8e-13, Organism=Drosophila melanogaster, GI45554248, Length=224, Percent_Identity=29.0178571428571, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24640117, Length=224, Percent_Identity=29.0178571428571, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI28573296, Length=318, Percent_Identity=26.7295597484277, Blast_Score=66, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR005979 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.3.1.33 [H]
Molecular weight: Translated: 37759; Mature: 37759
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKNKNILITGGNSGIGLFAIINLLKTKNILYVVIKNEFRKNEFLKKIEKYFDKNYLSKF CCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH LNIIENCDLSDLDNIKKIKDYFISKKIFIDILVLNAGLQYTGSFYPKVSKQGIELTFAVN HHHHHCCCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCEEEEEHHH HLAHFYLVNVLKDFIRDIEESRIIITSSDVHDPKSSGGNIGKKAGLNNLVNLRKKVTGQF HHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCHHHCHHHHHHHHHHHHHHH LNFNADEAYKNSKLCNILFAKELEKKLKISSSKISVITWAPGLVIPNDDLGFFRYSKRFN HCCCCHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEECCCCCCHHHHHCHHH LFGYLIFSKAAKNILGISESIENAGKILSEIVLDSNLNNIGYVHLSNKLISFKKHKLVES HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHH KVSDEANNSELASKLWILSEEICRSFGFVTFNI HHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEC >Mature Secondary Structure MIKNKNILITGGNSGIGLFAIINLLKTKNILYVVIKNEFRKNEFLKKIEKYFDKNYLSKF CCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH LNIIENCDLSDLDNIKKIKDYFISKKIFIDILVLNAGLQYTGSFYPKVSKQGIELTFAVN HHHHHCCCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCEEEEEHHH HLAHFYLVNVLKDFIRDIEESRIIITSSDVHDPKSSGGNIGKKAGLNNLVNLRKKVTGQF HHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCHHHCHHHHHHHHHHHHHHH LNFNADEAYKNSKLCNILFAKELEKKLKISSSKISVITWAPGLVIPNDDLGFFRYSKRFN HCCCCHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEECCCCCCHHHHHCHHH LFGYLIFSKAAKNILGISESIENAGKILSEIVLDSNLNNIGYVHLSNKLISFKKHKLVES HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHH KVSDEANNSELASKLWILSEEICRSFGFVTFNI HHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9559561 [H]