| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is 126695996
Identifier: 126695996
GI number: 126695996
Start: 584562
End: 585104
Strand: Direct
Name: 126695996
Synonym: P9301_06581
Alternate gene names: NA
Gene position: 584562-585104 (Clockwise)
Preceding gene: 126695994
Following gene: 126695999
Centisome position: 35.6
GC content: 28.36
Gene sequence:
>543_bases ATGTCGGGATATGTTTACCTTATTAGAGTAGGAGATCTTTATAGGATTGGGAAAACGGATAATCTTGAAAAGAAAATTAA AAAATTAAAGCCAGATGAATTATTAACATCAATTATGACTAAGGAGCCAGAAACTCTTGAGGCAAGATTACTAAGAAAAT ATAAGTCGCAAAGAATCCCTGAAACTGGTTATTTAAAGCTTTCGAAAAGACAAATTAGAGAATGTAAAAAGCAATTTGAA TTAAAGGGTAGCTTGCCTCACACTTTAGATGCTGAAGTTTCCATAACTCTTTTTGCATCTTTTTTATTGTTTTCATTAGG TTTTTTTATTTTTAATTATTTAAATTTTGGATTTGTAAGATCTATATCTTATTCTTTCGGAATGGCATCTCTACCAATGG TTATATTATTTGTTACAGGTAGTTTTGGGGGATACTTTTCTGAAGATTTATCTCTTTTTTCATTATTAACTAATCGAATA AAAGGTTTATTTATTGCAATTGCAATGCTTTCAATGGCTTACTTAATTTTTAATTTAGGTTAA
Upstream 100 bases:
>100_bases AATGAATATAAAATATCGTTTTTCATATTGTAAAAACTTTTAATTTCCCTAATTCTTTTAGTATTATCTAAGTAGGAACA GTTTTAATTTTACAACGCAA
Downstream 100 bases:
>100_bases ATTTCATAGTTACAATTTAAGGCGATTTCAAATGGAACTGATTGGGTAGGTAACTTAAGAATAGTTGAGCATATTTCAGC AATATCCTCAGGTTGTGTCA
Product: NADH-ubiquinone/plastoquinone complex I protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MSGYVYLIRVGDLYRIGKTDNLEKKIKKLKPDELLTSIMTKEPETLEARLLRKYKSQRIPETGYLKLSKRQIRECKKQFE LKGSLPHTLDAEVSITLFASFLLFSLGFFIFNYLNFGFVRSISYSFGMASLPMVILFVTGSFGGYFSEDLSLFSLLTNRI KGLFIAIAMLSMAYLIFNLG
Sequences:
>Translated_180_residues MSGYVYLIRVGDLYRIGKTDNLEKKIKKLKPDELLTSIMTKEPETLEARLLRKYKSQRIPETGYLKLSKRQIRECKKQFE LKGSLPHTLDAEVSITLFASFLLFSLGFFIFNYLNFGFVRSISYSFGMASLPMVILFVTGSFGGYFSEDLSLFSLLTNRI KGLFIAIAMLSMAYLIFNLG >Mature_179_residues SGYVYLIRVGDLYRIGKTDNLEKKIKKLKPDELLTSIMTKEPETLEARLLRKYKSQRIPETGYLKLSKRQIRECKKQFEL KGSLPHTLDAEVSITLFASFLLFSLGFFIFNYLNFGFVRSISYSFGMASLPMVILFVTGSFGGYFSEDLSLFSLLTNRIK GLFIAIAMLSMAYLIFNLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20595; Mature: 20464
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: PS00211 ABC_TRANSPORTER_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGYVYLIRVGDLYRIGKTDNLEKKIKKLKPDELLTSIMTKEPETLEARLLRKYKSQRIP CCCEEEEEEECCEEECCCCCCHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC ETGYLKLSKRQIRECKKQFELKGSLPHTLDAEVSITLFASFLLFSLGFFIFNYLNFGFVR CCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SISYSFGMASLPMVILFVTGSFGGYFSEDLSLFSLLTNRIKGLFIAIAMLSMAYLIFNLG HHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SGYVYLIRVGDLYRIGKTDNLEKKIKKLKPDELLTSIMTKEPETLEARLLRKYKSQRIP CCEEEEEEECCEEECCCCCCHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC ETGYLKLSKRQIRECKKQFELKGSLPHTLDAEVSITLFASFLLFSLGFFIFNYLNFGFVR CCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SISYSFGMASLPMVILFVTGSFGGYFSEDLSLFSLLTNRIKGLFIAIAMLSMAYLIFNLG HHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA