| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is menB [H]
Identifier: 126695972
GI number: 126695972
Start: 562037
End: 562894
Strand: Direct
Name: menB [H]
Synonym: P9301_06341
Alternate gene names: 126695972
Gene position: 562037-562894 (Clockwise)
Preceding gene: 126695971
Following gene: 126695973
Centisome position: 34.23
GC content: 36.01
Gene sequence:
>858_bases ATGAAAGTATTACCTGGTAAAACAAGCTTAAATTGGACAGAATACAAATCTTATGAGGATATATTGTTTCATAAATCAGA TGAGGGAATTGCGAGAATTGCAATTAATCGCCCTGAAAAAAGAAATGCATTTAGGCCACAAACTGTAGATGAACTCATTA ACGCATTTAATATCGTAAGAAATGATGAAAATATTGGAGTAGTTCTTTTTACAGGTGCGGGACCTGACAAGAGAGGTATT TATTCTTTTTGCTCTGGAGGCGATCAGAGTGTAAGAGGTGAAAATGGATATAAAAATGATGAAGGGAAGCAGAGGTTAAA TGTACTTGAACTTCAAAGATTAATAAGAAGTTTGCCTAAAGTAGTTATTGCCTTAGTTCCTGGTTTTGCAATTGGAGGAG GTCAGGTACTTCATTTAATTTGTGATCTTAGCATTGCCGCAGAAAATGCAATTTTTGGTCAAACAGGTCCAAGAGTTGGT AGTTTTGATGCTGGATTTGGATCTAGTTATTTGGCAAGACTCGTTGGTCAAAGAAAAGCAAAAGAAATTTGGTTTTTATG TAGAAAATATAATTCGAAAGAAGCATTAGAGATGGGCTTGATAAATGCAATTACAAAGATTGAAGAATTAGAAGCTGAGG GTGTAATCTGGGCAAGAGAGATTTTACGTAATAGTCCTACTGCTATTCGTATTCTTAAGGCTTCATTCAACGCGGAGAAT GATGGAATTGCTGGTATTCAAGAATTATCTGGATACACAACTCAATTATTTTATTCGTCTGAAGAAGCTCAAGAAGGTAG AGATGCCTTTCTCGAGAAGCGTCCACCAGACTTTTCTGAATATAAGTGGACACCCTAG
Upstream 100 bases:
>100_bases ATATTGATCCAGAAAATGAAATTTATGAAAAAAATGCCCTGCTAGAAAAAATAATTGGCAGTTAAATTCATTTCTTTCTA TCTTTAAATAATTAGTATTC
Downstream 100 bases:
>100_bases TTTATTCTTCAAAAGACCTTTTTAAATAATTATCAATGAGAATTCTTCTTGCCGCTGCTGAATGTGCTCCAATGATCAAA GTTGGAGGTATGGGAGATGT
Product: naphthoate synthase
Products: NA
Alternate protein names: DHNA-CoA synthase [H]
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MKVLPGKTSLNWTEYKSYEDILFHKSDEGIARIAINRPEKRNAFRPQTVDELINAFNIVRNDENIGVVLFTGAGPDKRGI YSFCSGGDQSVRGENGYKNDEGKQRLNVLELQRLIRSLPKVVIALVPGFAIGGGQVLHLICDLSIAAENAIFGQTGPRVG SFDAGFGSSYLARLVGQRKAKEIWFLCRKYNSKEALEMGLINAITKIEELEAEGVIWAREILRNSPTAIRILKASFNAEN DGIAGIQELSGYTTQLFYSSEEAQEGRDAFLEKRPPDFSEYKWTP
Sequences:
>Translated_285_residues MKVLPGKTSLNWTEYKSYEDILFHKSDEGIARIAINRPEKRNAFRPQTVDELINAFNIVRNDENIGVVLFTGAGPDKRGI YSFCSGGDQSVRGENGYKNDEGKQRLNVLELQRLIRSLPKVVIALVPGFAIGGGQVLHLICDLSIAAENAIFGQTGPRVG SFDAGFGSSYLARLVGQRKAKEIWFLCRKYNSKEALEMGLINAITKIEELEAEGVIWAREILRNSPTAIRILKASFNAEN DGIAGIQELSGYTTQLFYSSEEAQEGRDAFLEKRPPDFSEYKWTP >Mature_285_residues MKVLPGKTSLNWTEYKSYEDILFHKSDEGIARIAINRPEKRNAFRPQTVDELINAFNIVRNDENIGVVLFTGAGPDKRGI YSFCSGGDQSVRGENGYKNDEGKQRLNVLELQRLIRSLPKVVIALVPGFAIGGGQVLHLICDLSIAAENAIFGQTGPRVG SFDAGFGSSYLARLVGQRKAKEIWFLCRKYNSKEALEMGLINAITKIEELEAEGVIWAREILRNSPTAIRILKASFNAEN DGIAGIQELSGYTTQLFYSSEEAQEGRDAFLEKRPPDFSEYKWTP
Specific function: Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA) [H]
COG id: COG0447
COG function: function code H; Dihydroxynaphthoic acid synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=281, Percent_Identity=28.8256227758007, Blast_Score=105, Evalue=7e-23, Organism=Homo sapiens, GI31542718, Length=258, Percent_Identity=27.906976744186, Blast_Score=81, Evalue=9e-16, Organism=Homo sapiens, GI4502327, Length=276, Percent_Identity=28.9855072463768, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI45643119, Length=219, Percent_Identity=27.8538812785388, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI260275230, Length=219, Percent_Identity=27.8538812785388, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI260274832, Length=219, Percent_Identity=27.8538812785388, Blast_Score=69, Evalue=7e-12, Organism=Homo sapiens, GI70995211, Length=238, Percent_Identity=28.5714285714286, Blast_Score=68, Evalue=8e-12, Organism=Homo sapiens, GI4757966, Length=228, Percent_Identity=27.1929824561404, Blast_Score=68, Evalue=8e-12, Organism=Homo sapiens, GI51538581, Length=228, Percent_Identity=27.1929824561404, Blast_Score=68, Evalue=8e-12, Organism=Homo sapiens, GI25453481, Length=228, Percent_Identity=27.1929824561404, Blast_Score=68, Evalue=9e-12, Organism=Homo sapiens, GI51538573, Length=228, Percent_Identity=27.1929824561404, Blast_Score=68, Evalue=9e-12, Organism=Homo sapiens, GI4757968, Length=215, Percent_Identity=26.9767441860465, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI49355787, Length=215, Percent_Identity=26.9767441860465, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI157694516, Length=224, Percent_Identity=26.7857142857143, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI213417737, Length=224, Percent_Identity=26.7857142857143, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI1788597, Length=271, Percent_Identity=60.5166051660517, Blast_Score=350, Evalue=6e-98, Organism=Escherichia coli, GI87082183, Length=260, Percent_Identity=27.6923076923077, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1787659, Length=254, Percent_Identity=28.3464566929134, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1787660, Length=266, Percent_Identity=30.4511278195489, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI221142681, Length=265, Percent_Identity=29.4339622641509, Blast_Score=72, Evalue=4e-14, Organism=Caenorhabditis elegans, GI25145438, Length=266, Percent_Identity=30.4511278195489, Blast_Score=107, Evalue=7e-24, Organism=Caenorhabditis elegans, GI17554946, Length=254, Percent_Identity=27.9527559055118, Blast_Score=102, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17540714, Length=212, Percent_Identity=28.7735849056604, Blast_Score=90, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17549921, Length=209, Percent_Identity=28.7081339712919, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17560910, Length=183, Percent_Identity=29.5081967213115, Blast_Score=70, Evalue=9e-13, Organism=Caenorhabditis elegans, GI17534483, Length=284, Percent_Identity=25, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24653139, Length=290, Percent_Identity=30, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI20129971, Length=275, Percent_Identity=28, Blast_Score=92, Evalue=3e-19, Organism=Drosophila melanogaster, GI24653477, Length=275, Percent_Identity=28, Blast_Score=92, Evalue=3e-19, Organism=Drosophila melanogaster, GI24654903, Length=208, Percent_Identity=30.2884615384615, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI21357171, Length=210, Percent_Identity=30.4761904761905, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI24650670, Length=181, Percent_Identity=29.2817679558011, Blast_Score=66, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 - InterPro: IPR010198 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.1.3.36 [H]
Molecular weight: Translated: 31755; Mature: 31755
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLPGKTSLNWTEYKSYEDILFHKSDEGIARIAINRPEKRNAFRPQTVDELINAFNIVR CCCCCCCCCCCHHHHCCHHHHEEECCCCCEEEEEECCCHHCCCCCCHHHHHHHHHHHHHC NDENIGVVLFTGAGPDKRGIYSFCSGGDQSVRGENGYKNDEGKQRLNVLELQRLIRSLPK CCCCEEEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH VVIALVPGFAIGGGQVLHLICDLSIAAENAIFGQTGPRVGSFDAGFGSSYLARLVGQRKA HHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHH KEIWFLCRKYNSKEALEMGLINAITKIEELEAEGVIWAREILRNSPTAIRILKASFNAEN HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEEECCCCCC DGIAGIQELSGYTTQLFYSSEEAQEGRDAFLEKRPPDFSEYKWTP CCCCHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MKVLPGKTSLNWTEYKSYEDILFHKSDEGIARIAINRPEKRNAFRPQTVDELINAFNIVR CCCCCCCCCCCHHHHCCHHHHEEECCCCCEEEEEECCCHHCCCCCCHHHHHHHHHHHHHC NDENIGVVLFTGAGPDKRGIYSFCSGGDQSVRGENGYKNDEGKQRLNVLELQRLIRSLPK CCCCEEEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH VVIALVPGFAIGGGQVLHLICDLSIAAENAIFGQTGPRVGSFDAGFGSSYLARLVGQRKA HHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHH KEIWFLCRKYNSKEALEMGLINAITKIEELEAEGVIWAREILRNSPTAIRILKASFNAEN HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEEECCCCCC DGIAGIQELSGYTTQLFYSSEEAQEGRDAFLEKRPPDFSEYKWTP CCCCHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]