| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is 126695968
Identifier: 126695968
GI number: 126695968
Start: 558043
End: 559215
Strand: Direct
Name: 126695968
Synonym: P9301_06301
Alternate gene names: NA
Gene position: 558043-559215 (Clockwise)
Preceding gene: 126695967
Following gene: 126695971
Centisome position: 33.99
GC content: 31.29
Gene sequence:
>1173_bases ATGATAGCGGTGGAAGAAACTTTAAATAAAAAATGGAGTTGGTGGCCATTATTCCCCTTATATCCTTATGGAAAAAAGAA AACAATTTTTAGAGAATTAATCCCTGATCAAATATGGTCCTTGGAACAAATACAGGGACTTTATTATGTTGCTGTTCCAA TAAGAATGACTGTAATAAAGGTTGATAATGGATTGATGCTAATAAATCCATTGCCTCCGACAAAAGAATTAATAAATGAG TTAGAAAAATTAACTGCGATTCACGGCAAAGTAAAAACAATAATTTTACCGAGTGCCTCTGGACTAGAACATAAAATTGG ACTGCCAGCTCTTTCAAGAATTTTTAAAGATGCAGAAATTTGGCTTTGTCCTGGACAATGGAGTTTTCCCATAAATCTAC CATTAGATTTTTTAGGAATTCCATCAAAAAGATCAAGAATACTGTTTGAGGAAGGTACTCCATATACAAACTCCTTTAAA TGGTCTTCATTAGGACCATTAAATTTAGGACTTGGAAGATATCAGGAGATAAGCTGTTTCCATTACCCTACGAAAACTCT TCATGTAACAGACGCAATAGTTGGAATAGACTCCAAACCACCTGAGATATTTAATTTTGATCCAACTCCACTTCTTTTTC ATTCTAGAGAGAGAGGAGATGAACCTTTGATTGACACCATCGAACAAAGAAAAAAAGGATGGAAAAGGTTAGTCTTATTT TCATCTTTTTTGAAACCAGGAAAATTAAATATTCCACCTTTAAAAGAAATATTTAATTATTCATTCAAAAAAGATCTTAG AAATTGGAGATCTCATTTCGGTATTTATCCCTTTTTATGGGACGAAGATTGGGAATCCTCTCTTGTTGAAATAATGGGTA AAGATACTCCTAAAATTCAAATTGCACCAGTTTTACAAAAATTAATTTTTCCGCGTTCAAAAGAAGTATTACTTAAATGG CTAGAAAATATAAAGTCTTTTGAAGATATGCAATATTTAATTCCAGCTCATTTTACGGCACCAATAAAATTTACAATAGA AGATTGTCAAAAATTAATTGATGAAATTAATTCCCAAAAGTGGGATAAACTTCCTGAGGATAATAAATTTTTGATGAGTT TATATAAAAAATTGTTTGAACTAGGAATAATTCCGGAAGAAGTAAATCTTTAA
Upstream 100 bases:
>100_bases GATCAATTGTATTGGCGCAAACTTTTATTTTTTTATTTGCTTTTTTATTCGCTCCAAGATATGGAATATTTAAGTTAAAG AAACTATTTGCTGGGTATAA
Downstream 100 bases:
>100_bases AAACTATTATTCTTCAATAGACATGTTTTCATCATTTTTGAGTGTTTGTTCCAGCTCTTTTCTTTGCTCCATTTGTCTTA AGAAATATCCTGTCATCATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 390; Mature: 390
Protein sequence:
>390_residues MIAVEETLNKKWSWWPLFPLYPYGKKKTIFRELIPDQIWSLEQIQGLYYVAVPIRMTVIKVDNGLMLINPLPPTKELINE LEKLTAIHGKVKTIILPSASGLEHKIGLPALSRIFKDAEIWLCPGQWSFPINLPLDFLGIPSKRSRILFEEGTPYTNSFK WSSLGPLNLGLGRYQEISCFHYPTKTLHVTDAIVGIDSKPPEIFNFDPTPLLFHSRERGDEPLIDTIEQRKKGWKRLVLF SSFLKPGKLNIPPLKEIFNYSFKKDLRNWRSHFGIYPFLWDEDWESSLVEIMGKDTPKIQIAPVLQKLIFPRSKEVLLKW LENIKSFEDMQYLIPAHFTAPIKFTIEDCQKLIDEINSQKWDKLPEDNKFLMSLYKKLFELGIIPEEVNL
Sequences:
>Translated_390_residues MIAVEETLNKKWSWWPLFPLYPYGKKKTIFRELIPDQIWSLEQIQGLYYVAVPIRMTVIKVDNGLMLINPLPPTKELINE LEKLTAIHGKVKTIILPSASGLEHKIGLPALSRIFKDAEIWLCPGQWSFPINLPLDFLGIPSKRSRILFEEGTPYTNSFK WSSLGPLNLGLGRYQEISCFHYPTKTLHVTDAIVGIDSKPPEIFNFDPTPLLFHSRERGDEPLIDTIEQRKKGWKRLVLF SSFLKPGKLNIPPLKEIFNYSFKKDLRNWRSHFGIYPFLWDEDWESSLVEIMGKDTPKIQIAPVLQKLIFPRSKEVLLKW LENIKSFEDMQYLIPAHFTAPIKFTIEDCQKLIDEINSQKWDKLPEDNKFLMSLYKKLFELGIIPEEVNL >Mature_390_residues MIAVEETLNKKWSWWPLFPLYPYGKKKTIFRELIPDQIWSLEQIQGLYYVAVPIRMTVIKVDNGLMLINPLPPTKELINE LEKLTAIHGKVKTIILPSASGLEHKIGLPALSRIFKDAEIWLCPGQWSFPINLPLDFLGIPSKRSRILFEEGTPYTNSFK WSSLGPLNLGLGRYQEISCFHYPTKTLHVTDAIVGIDSKPPEIFNFDPTPLLFHSRERGDEPLIDTIEQRKKGWKRLVLF SSFLKPGKLNIPPLKEIFNYSFKKDLRNWRSHFGIYPFLWDEDWESSLVEIMGKDTPKIQIAPVLQKLIFPRSKEVLLKW LENIKSFEDMQYLIPAHFTAPIKFTIEDCQKLIDEINSQKWDKLPEDNKFLMSLYKKLFELGIIPEEVNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45453; Mature: 45453
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAVEETLNKKWSWWPLFPLYPYGKKKTIFRELIPDQIWSLEQIQGLYYVAVPIRMTVIK CCCCHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCHHHHCCEEEEEEEEEEEEEE VDNGLMLINPLPPTKELINELEKLTAIHGKVKTIILPSASGLEHKIGLPALSRIFKDAEI ECCCEEEEECCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCHHHHHHHCCCEE WLCPGQWSFPINLPLDFLGIPSKRSRILFEEGTPYTNSFKWSSLGPLNLGLGRYQEISCF EEECCCCCCEECCCHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEE HYPTKTLHVTDAIVGIDSKPPEIFNFDPTPLLFHSRERGDEPLIDTIEQRKKGWKRLVLF ECCCCEEEEEHEEEECCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHH SSFLKPGKLNIPPLKEIFNYSFKKDLRNWRSHFGIYPFLWDEDWESSLVEIMGKDTPKIQ HHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCCCCEE IAPVLQKLIFPRSKEVLLKWLENIKSFEDMQYLIPAHFTAPIKFTIEDCQKLIDEINSQK HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHCCHH WDKLPEDNKFLMSLYKKLFELGIIPEEVNL HCCCCCCCHHHHHHHHHHHHHCCCCHHCCC >Mature Secondary Structure MIAVEETLNKKWSWWPLFPLYPYGKKKTIFRELIPDQIWSLEQIQGLYYVAVPIRMTVIK CCCCHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCHHHHCCEEEEEEEEEEEEEE VDNGLMLINPLPPTKELINELEKLTAIHGKVKTIILPSASGLEHKIGLPALSRIFKDAEI ECCCEEEEECCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCHHHHHHHCCCEE WLCPGQWSFPINLPLDFLGIPSKRSRILFEEGTPYTNSFKWSSLGPLNLGLGRYQEISCF EEECCCCCCEECCCHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEE HYPTKTLHVTDAIVGIDSKPPEIFNFDPTPLLFHSRERGDEPLIDTIEQRKKGWKRLVLF ECCCCEEEEEHEEEECCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHH SSFLKPGKLNIPPLKEIFNYSFKKDLRNWRSHFGIYPFLWDEDWESSLVEIMGKDTPKIQ HHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCCCCEE IAPVLQKLIFPRSKEVLLKWLENIKSFEDMQYLIPAHFTAPIKFTIEDCQKLIDEINSQK HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHCCHH WDKLPEDNKFLMSLYKKLFELGIIPEEVNL HCCCCCCCHHHHHHHHHHHHHCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA