BacMap

Definition	Prochlorococcus marinus str. MIT 9301, complete genome.
Accession	NC_009091
Length	1,641,879

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The map label for this gene is ucpA [C]

Identifier: 126695899

GI number: 126695899

Start: 490966

End: 491700

Strand: Direct

Name: ucpA [C]

Synonym: P9301_05611

Alternate gene names: 126695899

Gene position: 490966-491700 (Clockwise)

Preceding gene: 126695898

Following gene: 126695900

Centisome position: 29.9

GC content: 35.24

Gene sequence:

>735_bases
GTGAAATCCCCCAAAAAACTGAATAAATTGAAACTAGCTTTTATAACGGGTGCTACGAAAGGTATTGGTAAATCTACCGC
AATTACTTTTGCTAATGCTGGCTGGGATTTAATTTTACTTTCCAGGAATATGGATTTAATGGAGAAACTAAAGAGCGAAC
TATTGAATACTAAATCAAAAATTAACCTAATTAAATGTGATTTATCTAATTCTCTAGAAATAGAGCATTGTGTTAAAGAA
GCAATTGAGAAATATGGGTGCCCTTCAGTTTTGATAAATAATGCCGGTTGCGCATTTAATAGCCCTTTAGTTGAAATGGA
TTTAGGTCAATGGGAAAAAACTATTCAAATAAACCTCACAAGTGTTTTTCAAATTTGCAGCGCAATAATCCCTCAAATGA
GAAAGAATGGTGGTTTAGTGATTAATGTTAGTAGTCATGCCTCATATAATGCATTCCCCCAATGGGGAGCTTATTGTATT
TCAAAATCTGCATTAGCGATGTTTACTAAATGCCTGAGGGAAGAGGAGAGATCTAATTCAATAAGAGCTTGCACAATAAC
TTTAGGTTCAGTAAATACTCCTCTTTGGGACTCGGAATCTATCAATGCTGATTTTGATAGAACTTCTATGCTCTCCTCAA
GCGAAGTATCAGATACTATTCTCTATATGGCTCAACAACCTGAGTCACAACTGATTGAAGACTTAACTTTAATGCCCTCT
GGTGGAGCCTTTTAA

Upstream 100 bases:

>100_bases
TTACTGAAAATGCCTGAAGACGAATTAATTGAGGAAAGATACAAAAAGTTTAGGGTTTTAGGTAAATTTATCGAAGCAAA
TAATATTGAAGAGATTTATA

Downstream 100 bases:

>100_bases
ACATTCTGTTTATTTGCTTAATCTTAAAATAGTGATTTTTTTTAGTGCTATTTCAACCCGATTGAACAAGAGAATGTGAT
ATAGTATATGAGCAATTAAG

Product: short chain dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MKSPKKLNKLKLAFITGATKGIGKSTAITFANAGWDLILLSRNMDLMEKLKSELLNTKSKINLIKCDLSNSLEIEHCVKE
AIEKYGCPSVLINNAGCAFNSPLVEMDLGQWEKTIQINLTSVFQICSAIIPQMRKNGGLVINVSSHASYNAFPQWGAYCI
SKSALAMFTKCLREEERSNSIRACTITLGSVNTPLWDSESINADFDRTSMLSSSEVSDTILYMAQQPESQLIEDLTLMPS
GGAF

Sequences:

>Translated_244_residues
MKSPKKLNKLKLAFITGATKGIGKSTAITFANAGWDLILLSRNMDLMEKLKSELLNTKSKINLIKCDLSNSLEIEHCVKE
AIEKYGCPSVLINNAGCAFNSPLVEMDLGQWEKTIQINLTSVFQICSAIIPQMRKNGGLVINVSSHASYNAFPQWGAYCI
SKSALAMFTKCLREEERSNSIRACTITLGSVNTPLWDSESINADFDRTSMLSSSEVSDTILYMAQQPESQLIEDLTLMPS
GGAF
>Mature_244_residues
MKSPKKLNKLKLAFITGATKGIGKSTAITFANAGWDLILLSRNMDLMEKLKSELLNTKSKINLIKCDLSNSLEIEHCVKE
AIEKYGCPSVLINNAGCAFNSPLVEMDLGQWEKTIQINLTSVFQICSAIIPQMRKNGGLVINVSSHASYNAFPQWGAYCI
SKSALAMFTKCLREEERSNSIRACTITLGSVNTPLWDSESINADFDRTSMLSSSEVSDTILYMAQQPESQLIEDLTLMPS
GGAF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI20149619, Length=207, Percent_Identity=28.9855072463768, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI142976729, Length=175, Percent_Identity=33.1428571428571, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI5031737, Length=187, Percent_Identity=30.4812834224599, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI33667109, Length=187, Percent_Identity=30.4812834224599, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI109715829, Length=246, Percent_Identity=26.4227642276423, Blast_Score=81, Evalue=7e-16,
Organism=Homo sapiens, GI31542939, Length=196, Percent_Identity=29.5918367346939, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI32483357, Length=185, Percent_Identity=27.5675675675676, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI7705855, Length=175, Percent_Identity=29.7142857142857, Blast_Score=78, Evalue=7e-15,
Organism=Homo sapiens, GI226371731, Length=176, Percent_Identity=28.4090909090909, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI4557649, Length=193, Percent_Identity=27.4611398963731, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI19923817, Length=250, Percent_Identity=24, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI224922801, Length=166, Percent_Identity=30.1204819277108, Blast_Score=75, Evalue=4e-14,
Organism=Homo sapiens, GI4503817, Length=227, Percent_Identity=26.8722466960352, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI7706318, Length=169, Percent_Identity=28.4023668639053, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI210032110, Length=166, Percent_Identity=28.3132530120482, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI7705925, Length=217, Percent_Identity=25.8064516129032, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI126723191, Length=174, Percent_Identity=27.0114942528736, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI157739938, Length=184, Percent_Identity=29.3478260869565, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI32455239, Length=190, Percent_Identity=27.8947368421053, Blast_Score=68, Evalue=6e-12,
Organism=Homo sapiens, GI5031765, Length=190, Percent_Identity=27.8947368421053, Blast_Score=68, Evalue=6e-12,
Organism=Homo sapiens, GI59889578, Length=169, Percent_Identity=26.6272189349112, Blast_Score=68, Evalue=6e-12,
Organism=Homo sapiens, GI40254992, Length=236, Percent_Identity=22.0338983050847, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI40254986, Length=177, Percent_Identity=25.9887005649718, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI87082100, Length=190, Percent_Identity=34.2105263157895, Blast_Score=101, Evalue=5e-23,
Organism=Escherichia coli, GI1788459, Length=189, Percent_Identity=28.5714285714286, Blast_Score=88, Evalue=6e-19,
Organism=Escherichia coli, GI1787905, Length=141, Percent_Identity=34.0425531914894, Blast_Score=84, Evalue=9e-18,
Organism=Escherichia coli, GI1787335, Length=244, Percent_Identity=25.4098360655738, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1787820, Length=237, Percent_Identity=24.0506329113924, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI2367175, Length=206, Percent_Identity=26.6990291262136, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI87082160, Length=195, Percent_Identity=29.7435897435897, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1789208, Length=214, Percent_Identity=24.7663551401869, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1786701, Length=190, Percent_Identity=26.8421052631579, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1787526, Length=192, Percent_Identity=25, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1789378, Length=221, Percent_Identity=25.3393665158371, Blast_Score=65, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17562908, Length=196, Percent_Identity=31.1224489795918, Blast_Score=102, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17562906, Length=203, Percent_Identity=30.0492610837438, Blast_Score=101, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI71994600, Length=236, Percent_Identity=29.2372881355932, Blast_Score=98, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI71994604, Length=235, Percent_Identity=26.8085106382979, Blast_Score=98, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI193204405, Length=256, Percent_Identity=26.5625, Blast_Score=94, Evalue=9e-20,
Organism=Caenorhabditis elegans, GI17538480, Length=256, Percent_Identity=25.78125, Blast_Score=91, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI17559104, Length=256, Percent_Identity=24.609375, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17551412, Length=198, Percent_Identity=28.2828282828283, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17531453, Length=203, Percent_Identity=29.064039408867, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17562904, Length=196, Percent_Identity=26.530612244898, Blast_Score=88, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17560150, Length=189, Percent_Identity=27.5132275132275, Blast_Score=85, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17560176, Length=235, Percent_Identity=29.3617021276596, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17561402, Length=250, Percent_Identity=26.8, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI25147288, Length=242, Percent_Identity=26.8595041322314, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17562910, Length=205, Percent_Identity=28.2926829268293, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17560332, Length=194, Percent_Identity=28.3505154639175, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI25152911, Length=241, Percent_Identity=27.8008298755187, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17559552, Length=246, Percent_Identity=28.0487804878049, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17544670, Length=264, Percent_Identity=25.7575757575758, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17563726, Length=192, Percent_Identity=28.6458333333333, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI72000259, Length=256, Percent_Identity=25.390625, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17562990, Length=186, Percent_Identity=26.3440860215054, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17560220, Length=256, Percent_Identity=23.828125, Blast_Score=78, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17538486, Length=193, Percent_Identity=27.4611398963731, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17565030, Length=262, Percent_Identity=25.1908396946565, Blast_Score=77, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI115534694, Length=217, Percent_Identity=27.6497695852535, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17564282, Length=162, Percent_Identity=29.6296296296296, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17557668, Length=244, Percent_Identity=26.2295081967213, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI212646214, Length=242, Percent_Identity=26.4462809917355, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17555706, Length=242, Percent_Identity=26.4462809917355, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17570069, Length=204, Percent_Identity=27.9411764705882, Blast_Score=70, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17508895, Length=199, Percent_Identity=25.6281407035176, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17560676, Length=198, Percent_Identity=24.7474747474747, Blast_Score=68, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6323882, Length=255, Percent_Identity=28.6274509803922, Blast_Score=108, Evalue=7e-25,
Organism=Saccharomyces cerevisiae, GI6322226, Length=190, Percent_Identity=28.9473684210526, Blast_Score=81, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6322227, Length=194, Percent_Identity=27.8350515463918, Blast_Score=73, Evalue=5e-14,
Organism=Drosophila melanogaster, GI23397609, Length=232, Percent_Identity=28.448275862069, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI116007236, Length=243, Percent_Identity=25.9259259259259, Blast_Score=99, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24644339, Length=195, Percent_Identity=30.2564102564103, Blast_Score=98, Evalue=4e-21,
Organism=Drosophila melanogaster, GI21357041, Length=189, Percent_Identity=28.042328042328, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI28571526, Length=189, Percent_Identity=28.5714285714286, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24663911, Length=246, Percent_Identity=26.8292682926829, Blast_Score=90, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24641232, Length=243, Percent_Identity=26.7489711934156, Blast_Score=85, Evalue=5e-17,
Organism=Drosophila melanogaster, GI21355319, Length=245, Percent_Identity=28.1632653061224, Blast_Score=84, Evalue=8e-17,
Organism=Drosophila melanogaster, GI281364494, Length=247, Percent_Identity=27.1255060728745, Blast_Score=82, Evalue=2e-16,
Organism=Drosophila melanogaster, GI28571387, Length=245, Percent_Identity=27.7551020408163, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI21358495, Length=202, Percent_Identity=30.1980198019802, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24643142, Length=176, Percent_Identity=30.1136363636364, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24641388, Length=251, Percent_Identity=27.4900398406374, Blast_Score=78, Evalue=5e-15,
Organism=Drosophila melanogaster, GI24639444, Length=244, Percent_Identity=25.8196721311475, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI116007234, Length=247, Percent_Identity=26.3157894736842, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI116007238, Length=176, Percent_Identity=26.7045454545455, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI28574402, Length=203, Percent_Identity=29.064039408867, Blast_Score=71, Evalue=8e-13,
Organism=Drosophila melanogaster, GI24584744, Length=202, Percent_Identity=28.2178217821782, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI17737361, Length=202, Percent_Identity=25.2475247524752, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI281364892, Length=186, Percent_Identity=27.4193548387097, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24648944, Length=235, Percent_Identity=25.9574468085106, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24640492, Length=190, Percent_Identity=26.8421052631579, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24649181, Length=189, Percent_Identity=24.3386243386243, Blast_Score=65, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24648693, Length=251, Percent_Identity=24.7011952191235, Blast_Score=65, Evalue=6e-11,
Organism=Drosophila melanogaster, GI21355889, Length=251, Percent_Identity=24.7011952191235, Blast_Score=65, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24665243, Length=228, Percent_Identity=24.5614035087719, Blast_Score=64, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 26817; Mature: 26817

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSPKKLNKLKLAFITGATKGIGKSTAITFANAGWDLILLSRNMDLMEKLKSELLNTKSK
CCCCHHHHHEEEEEEECCCCCCCCCEEEEEECCCCEEEEEECCHHHHHHHHHHHHCCHHH
INLIKCDLSNSLEIEHCVKEAIEKYGCPSVLINNAGCAFNSPLVEMDLGQWEKTIQINLT
EEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEECCCCCCEEEEEEHH
SVFQICSAIIPQMRKNGGLVINVSSHASYNAFPQWGAYCISKSALAMFTKCLREEERSNS
HHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
IRACTITLGSVNTPLWDSESINADFDRTSMLSSSEVSDTILYMAQQPESQLIEDLTLMPS
EEEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHEEEEECCCHHHHHHHHEECCC
GGAF
CCCC
>Mature Secondary Structure
MKSPKKLNKLKLAFITGATKGIGKSTAITFANAGWDLILLSRNMDLMEKLKSELLNTKSK
CCCCHHHHHEEEEEEECCCCCCCCCEEEEEECCCCEEEEEECCHHHHHHHHHHHHCCHHH
INLIKCDLSNSLEIEHCVKEAIEKYGCPSVLINNAGCAFNSPLVEMDLGQWEKTIQINLT
EEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEECCCCCCEEEEEEHH
SVFQICSAIIPQMRKNGGLVINVSSHASYNAFPQWGAYCISKSALAMFTKCLREEERSNS
HHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
IRACTITLGSVNTPLWDSESINADFDRTSMLSSSEVSDTILYMAQQPESQLIEDLTLMPS
EEEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHEEEEECCCHHHHHHHHEECCC
GGAF
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA