| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is 126695880
Identifier: 126695880
GI number: 126695880
Start: 471480
End: 472841
Strand: Direct
Name: 126695880
Synonym: P9301_05421
Alternate gene names: NA
Gene position: 471480-472841 (Clockwise)
Preceding gene: 126695878
Following gene: 126695881
Centisome position: 28.72
GC content: 27.9
Gene sequence:
>1362_bases ATGATCTTTAAAAATATTTCTAAGTCAAAACTCACTTTAGCTTTTATTTCTATAGTCATAACTTTTTTTGTATGGCAACA AGGCTTAAGAGATAGTTTAAATAGACCATCTGTCACATTTGATATTAGTCAAAAAGAGCAAGAAATTGCTGAATTATCTC TCCAATCAATACCTGTAAATCTAAAAAAAATTTTTATCATTAATGATCCTGTTGATCAAATAAATAAATCACTCTCTGAT GTCTCATTTGAAGAGCTAACAGAAAGGAATAAATTAATTCGAATAATTACTTCAGAATTAAATGATCCTAAAATCTATAA AAATATATCCAAAGATTTTGAAAATAAAAACTTTAAATTTCTTATTGATGAGATAGAAAAAAAATCTAATAATAATTCAT ATAAACCGAGTCCTGATACATTTGATTTATTTAAAGGTGATAGATTTTTATATCACCTTTTAAGCCGGAAATTTGATTTT GACGATAGTGCATTAATAACAAAATCATTTTCAAGCAAAATGTTTTTAAAGATATTAGCCATAAGACTGATACCACTTTT TACAATACTTATTGGCTCTATTCTGGCTTTAAAAATATTATGGACAACCATAGCTTTGAAAAAGTTTGGTTGGAAAGAAA TTAAATACTTAGATTTAGAATTAATAGATATGGTTTTACTAATTGCAGGTGGATTTGTTGTTTTAGGAGAAGTGGTATCA CCTTTGTTTTCGATCAGTTTGGTTGAACTTTTCTCTAGAAATATCTCTAATGAATTGTCTCAATCCTTAAAAATTTTCTT TGGATATCTTTTCATGGCTATTCCTCCATTAGGGATAGTTTATTATCAAATAAAATCTTTGAATGGTGAATTTAATTTTA AAAAGGATTATTTACAGTTCAATTTCTTGCCCATAAAATATGCAATTATTCAGGGTATTAAAGGTTGGTTAACAATTGTT CCTTTTGTTTTATTGATCTCTCTAATTATGAATAGTCTGATCGATAATCAAAATGGTAGTAACCCTTTGCTGGAAATTGT TCTTAATAATAATAATTACTTATCATTTTTTCTATTATTTTTAACAACAACTCTTCTAGCTCCTCTATTTGAGGAGATTA TATTTCGCGGTATTTTACTACCAACTCTCTCAAGAAATTTTGGAGTAATTTCGGGCATCATAATTTCAGCCTTTATCTTT GCATTAGCCCATTTAAGTTTGGGAGAAATGCCGCCACTATTTGTTCTAGGAATTGGATTAGGAATCACAAGAATTGCTTC AGGGAGTTTGTTCTCTTCAGTGATTATGCATTCTTTATGGAATGGATTGACCTTCTTAAATTTGTTCTTATTGAGGACAT AA
Upstream 100 bases:
>100_bases ATTAAGATAATTTAATCATCTCATGGCGTGATTAAAATAGATACAAAATATAAGGAACTTCAATGATAACTAAGTATAGT TTCAATAATATAATTTATTT
Downstream 100 bases:
>100_bases AGAATTTAATTTTTTACTTGCGAATCACACAAAAAGATGTTTATTTAATTAGTAATACTCTTTTCATTTAAAAAATAAAT CATTGATGAAACCTTATGGG
Product: membrane-associated protease
Products: NA
Alternate protein names: Membrane-Associated Protease; Metal-Dependent Membrane Protease; Membrane Associated Protease; CAAX Amino Terminal Protease Family; Caax Amino Terminal Protease Family Protein; Membrane Associated Protease-Like; CAAX Amino Protease; CAAX Amino Terminal Protease Family Protein
Number of amino acids: Translated: 453; Mature: 453
Protein sequence:
>453_residues MIFKNISKSKLTLAFISIVITFFVWQQGLRDSLNRPSVTFDISQKEQEIAELSLQSIPVNLKKIFIINDPVDQINKSLSD VSFEELTERNKLIRIITSELNDPKIYKNISKDFENKNFKFLIDEIEKKSNNNSYKPSPDTFDLFKGDRFLYHLLSRKFDF DDSALITKSFSSKMFLKILAIRLIPLFTILIGSILALKILWTTIALKKFGWKEIKYLDLELIDMVLLIAGGFVVLGEVVS PLFSISLVELFSRNISNELSQSLKIFFGYLFMAIPPLGIVYYQIKSLNGEFNFKKDYLQFNFLPIKYAIIQGIKGWLTIV PFVLLISLIMNSLIDNQNGSNPLLEIVLNNNNYLSFFLLFLTTTLLAPLFEEIIFRGILLPTLSRNFGVISGIIISAFIF ALAHLSLGEMPPLFVLGIGLGITRIASGSLFSSVIMHSLWNGLTFLNLFLLRT
Sequences:
>Translated_453_residues MIFKNISKSKLTLAFISIVITFFVWQQGLRDSLNRPSVTFDISQKEQEIAELSLQSIPVNLKKIFIINDPVDQINKSLSD VSFEELTERNKLIRIITSELNDPKIYKNISKDFENKNFKFLIDEIEKKSNNNSYKPSPDTFDLFKGDRFLYHLLSRKFDF DDSALITKSFSSKMFLKILAIRLIPLFTILIGSILALKILWTTIALKKFGWKEIKYLDLELIDMVLLIAGGFVVLGEVVS PLFSISLVELFSRNISNELSQSLKIFFGYLFMAIPPLGIVYYQIKSLNGEFNFKKDYLQFNFLPIKYAIIQGIKGWLTIV PFVLLISLIMNSLIDNQNGSNPLLEIVLNNNNYLSFFLLFLTTTLLAPLFEEIIFRGILLPTLSRNFGVISGIIISAFIF ALAHLSLGEMPPLFVLGIGLGITRIASGSLFSSVIMHSLWNGLTFLNLFLLRT >Mature_453_residues MIFKNISKSKLTLAFISIVITFFVWQQGLRDSLNRPSVTFDISQKEQEIAELSLQSIPVNLKKIFIINDPVDQINKSLSD VSFEELTERNKLIRIITSELNDPKIYKNISKDFENKNFKFLIDEIEKKSNNNSYKPSPDTFDLFKGDRFLYHLLSRKFDF DDSALITKSFSSKMFLKILAIRLIPLFTILIGSILALKILWTTIALKKFGWKEIKYLDLELIDMVLLIAGGFVVLGEVVS PLFSISLVELFSRNISNELSQSLKIFFGYLFMAIPPLGIVYYQIKSLNGEFNFKKDYLQFNFLPIKYAIIQGIKGWLTIV PFVLLISLIMNSLIDNQNGSNPLLEIVLNNNNYLSFFLLFLTTTLLAPLFEEIIFRGILLPTLSRNFGVISGIIISAFIF ALAHLSLGEMPPLFVLGIGLGITRIASGSLFSSVIMHSLWNGLTFLNLFLLRT
Specific function: Unknown
COG id: COG1266
COG function: function code R; Predicted metal-dependent membrane protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51614; Mature: 51614
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFKNISKSKLTLAFISIVITFFVWQQGLRDSLNRPSVTFDISQKEQEIAELSLQSIPVN CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHCCCC LKKIFIINDPVDQINKSLSDVSFEELTERNKLIRIITSELNDPKIYKNISKDFENKNFKF EEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHH LIDEIEKKSNNNSYKPSPDTFDLFKGDRFLYHLLSRKFDFDDSALITKSFSSKMFLKILA HHHHHHHCCCCCCCCCCCCCHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH IRLIPLFTILIGSILALKILWTTIALKKFGWKEIKYLDLELIDMVLLIAGGFVVLGEVVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHH PLFSISLVELFSRNISNELSQSLKIFFGYLFMAIPPLGIVYYQIKSLNGEFNFKKDYLQF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHEE NFLPIKYAIIQGIKGWLTIVPFVLLISLIMNSLIDNQNGSNPLLEIVLNNNNYLSFFLLF ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHH LTTTLLAPLFEEIIFRGILLPTLSRNFGVISGIIISAFIFALAHLSLGEMPPLFVLGIGL HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH GITRIASGSLFSSVIMHSLWNGLTFLNLFLLRT HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIFKNISKSKLTLAFISIVITFFVWQQGLRDSLNRPSVTFDISQKEQEIAELSLQSIPVN CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHCCCC LKKIFIINDPVDQINKSLSDVSFEELTERNKLIRIITSELNDPKIYKNISKDFENKNFKF EEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHH LIDEIEKKSNNNSYKPSPDTFDLFKGDRFLYHLLSRKFDFDDSALITKSFSSKMFLKILA HHHHHHHCCCCCCCCCCCCCHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH IRLIPLFTILIGSILALKILWTTIALKKFGWKEIKYLDLELIDMVLLIAGGFVVLGEVVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHH PLFSISLVELFSRNISNELSQSLKIFFGYLFMAIPPLGIVYYQIKSLNGEFNFKKDYLQF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHEE NFLPIKYAIIQGIKGWLTIVPFVLLISLIMNSLIDNQNGSNPLLEIVLNNNNYLSFFLLF ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHH LTTTLLAPLFEEIIFRGILLPTLSRNFGVISGIIISAFIFALAHLSLGEMPPLFVLGIGL HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH GITRIASGSLFSSVIMHSLWNGLTFLNLFLLRT HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA