Definition Prochlorococcus marinus str. MIT 9301, complete genome.
Accession NC_009091
Length 1,641,879

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The map label for this gene is ypjH [H]

Identifier: 126695755

GI number: 126695755

Start: 362657

End: 363823

Strand: Reverse

Name: ypjH [H]

Synonym: P9301_04171

Alternate gene names: 126695755

Gene position: 363823-362657 (Counterclockwise)

Preceding gene: 126695756

Following gene: 126695744

Centisome position: 22.16

GC content: 33.08

Gene sequence:

>1167_bases
GTGGTTCATATTGCCTGGTTAGGGAAAAAATCCCCTTTTTGTGGAAATGTAACTTACGGTAATTCAACTACTAAGGAATT
AAAGGCCAGAGGGCATAAAATTAGTTTTATTCATTTCGACAATCCCTCTAGTTCAAATTCATCAAACCCATTATTTCTTG
CAAATGATCCTGATGTAAGTCTCCCGTATTTAATTAAATCTCAAGTTTATACAATACCCTCGCCAAGGGCAGAAAAAGAG
CTAAGGCTATCATTGGAAAGATTAAAACCTGACATAGTACATGCAAGCCTAACTTTATCTCCTTTAGACTTTAGACTTCC
AGAGCTTTGTAATGAAATTAATGTTCCTCTTATAGGAACATTTCATCCACCATTTGATGCAAAAAATAGAAATCTAACTG
CGAGCACTCAACAATTAACATATCAACTTTATGCTCCCTCTTTAGCAAAGTTCGATAAAATAATTATTTTTTCTGAACCT
CAAAAAAATGTTCTTGAGAAATTAGGAGTACCTAAAGAAAAACAAATAATTATTCCAAACGGCGTTGATGAAAATATTTG
GAAACCTTTTTACGAAAAAAGTAAAAAATATGCTCAAGTAAAAAACAAACTTGGAAACGAAAGAATCTTTTTATATATGG
GAAGGATTGCAAATGAGAAAAATATTGAGGCACTTTTAAGATCTTGGCGCCAAACAAAAACTCATAATTGCAAATTAGTT
ATTGTTGGTGATGGACCAATGAAGCCAACACTTCAAAATAGTTTTTCTAACCTGGGTAATGAGAAATTAATTTGGTGGGG
TGCCGAATTAGATTTAGAAACTAGGATAGCAATAATGCAAATAGCAGAGGTGTTTTTCTTACCAAGCTTAGTAGAAGGTT
TATCATTATCACTTTTAGAGGCAATGTCTGCTGGTACAGCTTGTGTAGCTACCGATGCCGGAGCTGATGGCGAAGTTTTA
GATAAAGGAGCAGGAATAGTAATTTCAACTGATAATGTGGCTGCACAATTGAAAACTATAATCCCAATTCTTGTGGAACA
TCCGTCATTTACAAAAGATCTTGGTGAAAAAGCTAGAGAACGAGTACTTGAGAGATATACAATTACTAAAAATATAAATT
CACTTGAAAAAGTTTATACAAACTTAAAAGATAATTATAAAACCTAA

Upstream 100 bases:

>100_bases
AGAAATATATAGTTAGCATTTTCATGAAGCATTAAAAATTTAAAAAATATGATCATGGCGCCTTTGCCTGTTAACTTAAT
AAATAGTTAATTCAATTAGT

Downstream 100 bases:

>100_bases
CGAAACTCTTTACTTCTATTACTAGCTGAAACTATTGATTCAATTAATGCTGACCTTACACTCTTTTTTTCTAAAACCCT
TAAAGCAGAAATAGTTGTTC

Product: putative glycosyl transferase, group 1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MVHIAWLGKKSPFCGNVTYGNSTTKELKARGHKISFIHFDNPSSSNSSNPLFLANDPDVSLPYLIKSQVYTIPSPRAEKE
LRLSLERLKPDIVHASLTLSPLDFRLPELCNEINVPLIGTFHPPFDAKNRNLTASTQQLTYQLYAPSLAKFDKIIIFSEP
QKNVLEKLGVPKEKQIIIPNGVDENIWKPFYEKSKKYAQVKNKLGNERIFLYMGRIANEKNIEALLRSWRQTKTHNCKLV
IVGDGPMKPTLQNSFSNLGNEKLIWWGAELDLETRIAIMQIAEVFFLPSLVEGLSLSLLEAMSAGTACVATDAGADGEVL
DKGAGIVISTDNVAAQLKTIIPILVEHPSFTKDLGEKARERVLERYTITKNINSLEKVYTNLKDNYKT

Sequences:

>Translated_388_residues
MVHIAWLGKKSPFCGNVTYGNSTTKELKARGHKISFIHFDNPSSSNSSNPLFLANDPDVSLPYLIKSQVYTIPSPRAEKE
LRLSLERLKPDIVHASLTLSPLDFRLPELCNEINVPLIGTFHPPFDAKNRNLTASTQQLTYQLYAPSLAKFDKIIIFSEP
QKNVLEKLGVPKEKQIIIPNGVDENIWKPFYEKSKKYAQVKNKLGNERIFLYMGRIANEKNIEALLRSWRQTKTHNCKLV
IVGDGPMKPTLQNSFSNLGNEKLIWWGAELDLETRIAIMQIAEVFFLPSLVEGLSLSLLEAMSAGTACVATDAGADGEVL
DKGAGIVISTDNVAAQLKTIIPILVEHPSFTKDLGEKARERVLERYTITKNINSLEKVYTNLKDNYKT
>Mature_388_residues
MVHIAWLGKKSPFCGNVTYGNSTTKELKARGHKISFIHFDNPSSSNSSNPLFLANDPDVSLPYLIKSQVYTIPSPRAEKE
LRLSLERLKPDIVHASLTLSPLDFRLPELCNEINVPLIGTFHPPFDAKNRNLTASTQQLTYQLYAPSLAKFDKIIIFSEP
QKNVLEKLGVPKEKQIIIPNGVDENIWKPFYEKSKKYAQVKNKLGNERIFLYMGRIANEKNIEALLRSWRQTKTHNCKLV
IVGDGPMKPTLQNSFSNLGNEKLIWWGAELDLETRIAIMQIAEVFFLPSLVEGLSLSLLEAMSAGTACVATDAGADGEVL
DKGAGIVISTDNVAAQLKTIIPILVEHPSFTKDLGEKARERVLERYTITKNINSLEKVYTNLKDNYKT

Specific function: Adds A Galactose Goup To A Glucose Group Of Lps. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 43483; Mature: 43483

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVHIAWLGKKSPFCGNVTYGNSTTKELKARGHKISFIHFDNPSSSNSSNPLFLANDPDVS
CEEEEEECCCCCCCCCEECCCCHHHHHHHCCCEEEEEEECCCCCCCCCCCEEEECCCCCC
LPYLIKSQVYTIPSPRAEKELRLSLERLKPDIVHASLTLSPLDFRLPELCNEINVPLIGT
CCCEECCCEEECCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEE
FHPPFDAKNRNLTASTQQLTYQLYAPSLAKFDKIIIFSEPQKNVLEKLGVPKEKQIIIPN
CCCCCCCCCCCCEEHHHHEEEEEECCCHHCCCEEEEEECCHHHHHHHCCCCCCCEEEECC
GVDENIWKPFYEKSKKYAQVKNKLGNERIFLYMGRIANEKNIEALLRSWRQTKTHNCKLV
CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCEEE
IVGDGPMKPTLQNSFSNLGNEKLIWWGAELDLETRIAIMQIAEVFFLPSLVEGLSLSLLE
EECCCCCCCHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMSAGTACVATDAGADGEVLDKGAGIVISTDNVAAQLKTIIPILVEHPSFTKDLGEKARE
HHCCCCEEEEECCCCCCCEEECCCCEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
RVLERYTITKNINSLEKVYTNLKDNYKT
HHHHHHHHHHCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVHIAWLGKKSPFCGNVTYGNSTTKELKARGHKISFIHFDNPSSSNSSNPLFLANDPDVS
CEEEEEECCCCCCCCCEECCCCHHHHHHHCCCEEEEEEECCCCCCCCCCCEEEECCCCCC
LPYLIKSQVYTIPSPRAEKELRLSLERLKPDIVHASLTLSPLDFRLPELCNEINVPLIGT
CCCEECCCEEECCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEE
FHPPFDAKNRNLTASTQQLTYQLYAPSLAKFDKIIIFSEPQKNVLEKLGVPKEKQIIIPN
CCCCCCCCCCCCEEHHHHEEEEEECCCHHCCCEEEEEECCHHHHHHHCCCCCCCEEEECC
GVDENIWKPFYEKSKKYAQVKNKLGNERIFLYMGRIANEKNIEALLRSWRQTKTHNCKLV
CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCEEE
IVGDGPMKPTLQNSFSNLGNEKLIWWGAELDLETRIAIMQIAEVFFLPSLVEGLSLSLLE
EECCCCCCCHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMSAGTACVATDAGADGEVLDKGAGIVISTDNVAAQLKTIIPILVEHPSFTKDLGEKARE
HHCCCCEEEEECCCCCCCEEECCCCEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
RVLERYTITKNINSLEKVYTNLKDNYKT
HHHHHHHHHHCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]