| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is menE [H]
Identifier: 126695532
GI number: 126695532
Start: 178439
End: 179641
Strand: Reverse
Name: menE [H]
Synonym: P9301_01941
Alternate gene names: 126695532
Gene position: 179641-178439 (Counterclockwise)
Preceding gene: 126695533
Following gene: 126695529
Centisome position: 10.94
GC content: 26.6
Gene sequence:
>1203_bases ATGAAAAATAAAATTCATACTATTGAAGTTGAAAATAACGAAACTCAATCTGTAGAAAAAATTATTGAAAAAATTAGAGA TAATAAAATTATTTATGTAAAAAACAAATTTTATGAAGACAAAGATGTATTAGATTCAATTACTGAAAATGGGCCAGCAA TTATCTTAAACAGTAGTGGGAGTTCTGGAAAACCGAGACAATGTTTTCACCATTTAAATAATCTTAAATTATCTGCAACT ACATCAGGTCAATGGCTAATAGAGCAAGGATTTGAATTACAAAACTGCTTAATTTTAAATACTTTACCCCTGAACCATAT AAGTGGATTAATGCCAATTTTTAGAAGTCAAATTTGGGGATGTGATTGTATTAATATTTCTCCGAATTTGATAAAAAAAA CTCGAGAACTTTTACTTTTCACAATTAAATTTAAAAAAAACAAAAAACACTTGATTACATCATTAGTACCTACCCAATTA CAAAGACTTTTAGCTCAAAAAGATGGAATTAGTTGGCTAAAAATTTTTGATCTAATTTGGGTAGGTGGAGCTTCAATTTC AGACGAAACGGCAGAACAATGTATAAAAGAAAAAATAAAATTAGCACCTTGTTACGGCGCAACTGAAACAGCAGCAATGG TTACGAGTTTAAAACCAAAAGAATTCTTAATGGGTTTTAAAAATGTTGGAGAAATACTACCTGATACAAAAATAAGAATT AACGCACAAGGATTAATCGAAATAAAATCAGCCAGAATTGGAATCGAAATAATAGATTCTTTAAAAACTGAAAATTTCAA AAATAAAAATGGGTGGTGGCAAACAAGTGATTTAGGTGAAATTAAGCAAATCAATAATTCTTACTATTTAAAATTTGTTG GAAGAAGTGATAATGCCTTTAATTCAGGAGGAGAAGTTGTTTTCCCTGAAGTAATTGAATCTAGATTAAATGATTTCATT ATGAAAGAAAATATCCCAATTAATAAATTCAATATTGCGAAAGTATCTAACAAATTATGGGGAAATAAAATTAAAGTAAT AGTTGAATTTAGAGAACTTACAAATGATAAAAATATTGAAATTTCTTTAAATTTATTAAAAAATTTTTCTCAAAGTTGGC CTAAACATGAAAAGCCTGAAAAGTGGATTGTTAAAAACAAAAATAGCATTACAGAAAAAATAAACTATAAATTTAAAAAA TAA
Upstream 100 bases:
>100_bases AATTACAAGGACCAACACCAAAAGTTCCTGGTTTAGCAATGAATAAATTCCCTAATTCGTTTCTATTTTTAAATGAAGCA AAAACGATATGGGATCAACT
Downstream 100 bases:
>100_bases TATTCAGCATTCTTTTAAATTTGTACTCACATTAGAAGCCTCTATCCATCTTTCTAACTGATCGGGAATTTCTATTTTAT TTCTTGAATCAACATCTAAA
Product: putative O-succinylbenzoic acid--CoA ligase (OSB-CoA synthetase)
Products: NA
Alternate protein names: OSB-CoA synthetase; o-succinylbenzoyl-CoA synthetase [H]
Number of amino acids: Translated: 400; Mature: 400
Protein sequence:
>400_residues MKNKIHTIEVENNETQSVEKIIEKIRDNKIIYVKNKFYEDKDVLDSITENGPAIILNSSGSSGKPRQCFHHLNNLKLSAT TSGQWLIEQGFELQNCLILNTLPLNHISGLMPIFRSQIWGCDCINISPNLIKKTRELLLFTIKFKKNKKHLITSLVPTQL QRLLAQKDGISWLKIFDLIWVGGASISDETAEQCIKEKIKLAPCYGATETAAMVTSLKPKEFLMGFKNVGEILPDTKIRI NAQGLIEIKSARIGIEIIDSLKTENFKNKNGWWQTSDLGEIKQINNSYYLKFVGRSDNAFNSGGEVVFPEVIESRLNDFI MKENIPINKFNIAKVSNKLWGNKIKVIVEFRELTNDKNIEISLNLLKNFSQSWPKHEKPEKWIVKNKNSITEKINYKFKK
Sequences:
>Translated_400_residues MKNKIHTIEVENNETQSVEKIIEKIRDNKIIYVKNKFYEDKDVLDSITENGPAIILNSSGSSGKPRQCFHHLNNLKLSAT TSGQWLIEQGFELQNCLILNTLPLNHISGLMPIFRSQIWGCDCINISPNLIKKTRELLLFTIKFKKNKKHLITSLVPTQL QRLLAQKDGISWLKIFDLIWVGGASISDETAEQCIKEKIKLAPCYGATETAAMVTSLKPKEFLMGFKNVGEILPDTKIRI NAQGLIEIKSARIGIEIIDSLKTENFKNKNGWWQTSDLGEIKQINNSYYLKFVGRSDNAFNSGGEVVFPEVIESRLNDFI MKENIPINKFNIAKVSNKLWGNKIKVIVEFRELTNDKNIEISLNLLKNFSQSWPKHEKPEKWIVKNKNSITEKINYKFKK >Mature_400_residues MKNKIHTIEVENNETQSVEKIIEKIRDNKIIYVKNKFYEDKDVLDSITENGPAIILNSSGSSGKPRQCFHHLNNLKLSAT TSGQWLIEQGFELQNCLILNTLPLNHISGLMPIFRSQIWGCDCINISPNLIKKTRELLLFTIKFKKNKKHLITSLVPTQL QRLLAQKDGISWLKIFDLIWVGGASISDETAEQCIKEKIKLAPCYGATETAAMVTSLKPKEFLMGFKNVGEILPDTKIRI NAQGLIEIKSARIGIEIIDSLKTENFKNKNGWWQTSDLGEIKQINNSYYLKFVGRSDNAFNSGGEVVFPEVIESRLNDFI MKENIPINKFNIAKVSNKLWGNKIKVIVEFRELTNDKNIEISLNLLKNFSQSWPKHEKPEKWIVKNKNSITEKINYKFKK
Specific function: Converts 2-succinylbenzoate (OSB) to 2-succinylbenzoyl- CoA (OSB-CoA) [H]
COG id: COG0318
COG function: function code IQ; Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788595, Length=313, Percent_Identity=26.8370607028754, Blast_Score=83, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17558820, Length=361, Percent_Identity=24.6537396121884, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020845 - InterPro: IPR000873 - InterPro: IPR010192 - InterPro: IPR023015 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.26 [H]
Molecular weight: Translated: 45825; Mature: 45825
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKIHTIEVENNETQSVEKIIEKIRDNKIIYVKNKFYEDKDVLDSITENGPAIILNSSG CCCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCCEEEEECCC SSGKPRQCFHHLNNLKLSATTSGQWLIEQGFELQNCLILNTLPLNHISGLMPIFRSQIWG CCCCHHHHHHHHCCEEEEEECCCCCHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCC CDCINISPNLIKKTRELLLFTIKFKKNKKHLITSLVPTQLQRLLAQKDGISWLKIFDLIW CEEECCCHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH VGGASISDETAEQCIKEKIKLAPCYGATETAAMVTSLKPKEFLMGFKNVGEILPDTKIRI CCCCCCCHHHHHHHHHHHHEECCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEE NAQGLIEIKSARIGIEIIDSLKTENFKNKNGWWQTSDLGEIKQINNSYYLKFVGRSDNAF ECCCEEEEECCCCCHHHHHHHHCCCCCCCCCCEECCCCHHHHHCCCCEEEEEEECCCCCC NSGGEVVFPEVIESRLNDFIMKENIPINKFNIAKVSNKLWGNKIKVIVEFRELTNDKNIE CCCCCEEEHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHCCCEEEEEEEEHHHCCCCCEE ISLNLLKNFSQSWPKHEKPEKWIVKNKNSITEKINYKFKK EEHHHHHHHHHHCCCCCCCCHHEEECCCHHHHHCCCEECC >Mature Secondary Structure MKNKIHTIEVENNETQSVEKIIEKIRDNKIIYVKNKFYEDKDVLDSITENGPAIILNSSG CCCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCCEEEEECCC SSGKPRQCFHHLNNLKLSATTSGQWLIEQGFELQNCLILNTLPLNHISGLMPIFRSQIWG CCCCHHHHHHHHCCEEEEEECCCCCHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCC CDCINISPNLIKKTRELLLFTIKFKKNKKHLITSLVPTQLQRLLAQKDGISWLKIFDLIW CEEECCCHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH VGGASISDETAEQCIKEKIKLAPCYGATETAAMVTSLKPKEFLMGFKNVGEILPDTKIRI CCCCCCCHHHHHHHHHHHHEECCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEE NAQGLIEIKSARIGIEIIDSLKTENFKNKNGWWQTSDLGEIKQINNSYYLKFVGRSDNAF ECCCEEEEECCCCCHHHHHHHHCCCCCCCCCCEECCCCHHHHHCCCCEEEEEEECCCCCC NSGGEVVFPEVIESRLNDFIMKENIPINKFNIAKVSNKLWGNKIKVIVEFRELTNDKNIE CCCCCEEEHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHCCCEEEEEEEEHHHCCCCCEE ISLNLLKNFSQSWPKHEKPEKWIVKNKNSITEKINYKFKK EEHHHHHHHHHHCCCCCCCCHHEEECCCHHHHHCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA