Click here to switch to the map view.

The map label for this gene is 126455448

Identifier: 126455448

GI number: 126455448

Start: 2087287

End: 2087754

Strand: Reverse

Name: 126455448

Synonym: BURPS1106A_2092

Alternate gene names: NA

Gene position: 2087754-2087287 (Counterclockwise)

Preceding gene: 126453185

Following gene: 126453583

Centisome position: 52.34

GC content: 64.32

Gene sequence:

>468_bases
ATGTCGCTGAGCACAGATGTCGCCTTCTTTCGCCTTCTCGCCGACAGCTACCACCGGCTTGTCGGGAAATCGCTCGTTCC
GGAAGGCATGAGCGCAGCCGAAGGCGCTGCGTGGCTATACGAGGCCGCGCCGTTCGGCATGCTCGCGCACGATGCGTCGG
CGGACCCGGTGTTCGTCTACGGCAACCGGCGCGCGCAGGCGATTTTCGAATACGACTGGGACGAACTGACGACATTGCCT
TCGCGCCTGTCCGCGGAGCCGGTCGAGCGCCGAGAACGTCGTTCGTTCCTCGACCGGGTGGCGCGCGATGGCTTCGTATC
GGATTATCGTGGCGTGCGTGTGACCAAGTCGGGCAAGCGTTTCTGGATCGAGCATGCGACCGTTTGGCAGCTCACGGATT
CGGCCGGCCATTATCGCGGCCAGGCGGCGATGATTCCGGAAGTGCGGCCCATCGGCGAATCCGCCTGA

Upstream 100 bases:

>100_bases
GAGCTTCGTCGGGCGAGCCACGTTTTGCCCGGCTTTCATATAATGTCGCGGTCGTTCGTCGTCCATTCATGTACGCAATC
GCCCACAGGAGCCCACGCCG

Downstream 100 bases:

>100_bases
GCGTTGCCGCCTTGGGGGAGAGGAAGCCGCGGCGTGCCCCCCGGCATCGAAAAAACGCGGGCGAGCGCGGCTCGGCATCG
CTTTGCAGCGGCGCGCGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: MEKHLA Domain-Containing Protein; MEKHLA Domain Superfamily Protein; Mekhla Domain Protein; PAS Sensor Protein; Mekhla Domain; MEKHLA Domain Superfamily; Mekhla Domain Superfamily

Number of amino acids: Translated: 155; Mature: 154

Protein sequence:

>155_residues
MSLSTDVAFFRLLADSYHRLVGKSLVPEGMSAAEGAAWLYEAAPFGMLAHDASADPVFVYGNRRAQAIFEYDWDELTTLP
SRLSAEPVERRERRSFLDRVARDGFVSDYRGVRVTKSGKRFWIEHATVWQLTDSAGHYRGQAAMIPEVRPIGESA

Sequences:

>Translated_155_residues
MSLSTDVAFFRLLADSYHRLVGKSLVPEGMSAAEGAAWLYEAAPFGMLAHDASADPVFVYGNRRAQAIFEYDWDELTTLP
SRLSAEPVERRERRSFLDRVARDGFVSDYRGVRVTKSGKRFWIEHATVWQLTDSAGHYRGQAAMIPEVRPIGESA
>Mature_154_residues
SLSTDVAFFRLLADSYHRLVGKSLVPEGMSAAEGAAWLYEAAPFGMLAHDASADPVFVYGNRRAQAIFEYDWDELTTLPS
RLSAEPVERRERRSFLDRVARDGFVSDYRGVRVTKSGKRFWIEHATVWQLTDSAGHYRGQAAMIPEVRPIGESA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17414; Mature: 17283

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSTDVAFFRLLADSYHRLVGKSLVPEGMSAAEGAAWLYEAAPFGMLAHDASADPVFVY
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCEEECCCCCCEEEEE
GNRRAQAIFEYDWDELTTLPSRLSAEPVERRERRSFLDRVARDGFVSDYRGVRVTKSGKR
CCCCEEEEEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCE
FWIEHATVWQLTDSAGHYRGQAAMIPEVRPIGESA
EEEECCEEEEEECCCCCCCCCEEECCCCCCCCCCC
>Mature Secondary Structure 
SLSTDVAFFRLLADSYHRLVGKSLVPEGMSAAEGAAWLYEAAPFGMLAHDASADPVFVY
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCEEECCCCCCEEEEE
GNRRAQAIFEYDWDELTTLPSRLSAEPVERRERRSFLDRVARDGFVSDYRGVRVTKSGKR
CCCCEEEEEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCE
FWIEHATVWQLTDSAGHYRGQAAMIPEVRPIGESA
EEEECCEEEEEECCCCCCCCCEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA