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The map label for this gene is fliY [H]

Identifier: 126455413

GI number: 126455413

Start: 1787132

End: 1787926

Strand: Reverse

Name: fliY [H]

Synonym: BURPS1106A_1824

Alternate gene names: 126455413

Gene position: 1787926-1787132 (Counterclockwise)

Preceding gene: 126453525

Following gene: 126452898

Centisome position: 44.83

GC content: 65.03

Gene sequence:

>795_bases
ATGAAAATTGCGTCGCTGAAGAAGCTTCTGGTCACCGGCCTGATCGGCGCGTCGTTCGCCGCCGCCACCGCGCACGCGGC
GGATCTGCTCGACGAAGTCAAGCAACGCGGCACGCTGCGCATCGGCCTCGAGGGCACGTTCCCGCCGTTCAACTCGAAGA
ATCCGCAAGGCGAGCTCGTCGGCTTCGACGTCGACATCGCGAAGGCGATCGCCGCGAAGCTCGGCGTGAAGCCGGAATTC
GTCACGACCGAATGGAGCGGCATCATCGCGGGCCTGCAGGCGGGCAAGTTCGACGTGATCGTCAACCAGGTCGGCATCAC
CGACCCGCGCAAGCAGACGCTCGACTTCTCGCCGGCGTACACGTTCTCGTCCGCGCAGCTGATCCAGCGCAAGGACGACG
CGCGCCAGTTCAAGTCGCTCGAGGACCTGAAGGGCAAGAAGCTCGGCGTCGCGCTCGGCACGAACTACATGGACATGGCG
AAATCGGTGCCGGGCATCGACGTGAAGACGTATCCGGGCGCGCCCGAGTATCTGCGCGACCTCGCGGCGGGCCGCCTCGA
CGCGGCGCTCAACGATCGCCTGATGCTCGCGTATCTGACGAAGAACGCGCAGCTGCCGCTGCGCCCGGGCGCGAACGTCG
GCTCGGCGAACCCGTCGGGCATTCCGTTCAAGAAGGGCAATCCGAAGTTCGCGAAGGCAATCGCCGATGCGATGACCCAG
CTCGAAGCCGACGGCACGTTCACGAAGATCTCCGACAAGTGGTTCGGCATCGACGTGACGAAGCCCGTCAAGTGA

Upstream 100 bases:

>100_bases
AACAAACGGTATTTAGACATCGATTGTTATTTCGCTATCATTGAGCGATCGATTTCAAGGCCTCGTCGAAGGCTCCCATC
CCAGGCAAGGAAACAACACG

Downstream 100 bases:

>100_bases
ACGCGAGCGGGTAACCCGCGGCCTCGCCGCGACATCCGGCGGCGCGCGAGGGCGGCATCCGCAACGGTGCCGCCCTTGGC
ATTGCGCGCCCGGTTTATGA

Product: amino acid ABC transporter, periplasmic amino acid-binding protein

Products: NA

Alternate protein names: CBP; Protein fliY; Sulfate starvation-induced protein 7; SSI7 [H]

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MKIASLKKLLVTGLIGASFAAATAHAADLLDEVKQRGTLRIGLEGTFPPFNSKNPQGELVGFDVDIAKAIAAKLGVKPEF
VTTEWSGIIAGLQAGKFDVIVNQVGITDPRKQTLDFSPAYTFSSAQLIQRKDDARQFKSLEDLKGKKLGVALGTNYMDMA
KSVPGIDVKTYPGAPEYLRDLAAGRLDAALNDRLMLAYLTKNAQLPLRPGANVGSANPSGIPFKKGNPKFAKAIADAMTQ
LEADGTFTKISDKWFGIDVTKPVK

Sequences:

>Translated_264_residues
MKIASLKKLLVTGLIGASFAAATAHAADLLDEVKQRGTLRIGLEGTFPPFNSKNPQGELVGFDVDIAKAIAAKLGVKPEF
VTTEWSGIIAGLQAGKFDVIVNQVGITDPRKQTLDFSPAYTFSSAQLIQRKDDARQFKSLEDLKGKKLGVALGTNYMDMA
KSVPGIDVKTYPGAPEYLRDLAAGRLDAALNDRLMLAYLTKNAQLPLRPGANVGSANPSGIPFKKGNPKFAKAIADAMTQ
LEADGTFTKISDKWFGIDVTKPVK
>Mature_264_residues
MKIASLKKLLVTGLIGASFAAATAHAADLLDEVKQRGTLRIGLEGTFPPFNSKNPQGELVGFDVDIAKAIAAKLGVKPEF
VTTEWSGIIAGLQAGKFDVIVNQVGITDPRKQTLDFSPAYTFSSAQLIQRKDDARQFKSLEDLKGKKLGVALGTNYMDMA
KSVPGIDVKTYPGAPEYLRDLAAGRLDAALNDRLMLAYLTKNAQLPLRPGANVGSANPSGIPFKKGNPKFAKAIADAMTQ
LEADGTFTKISDKWFGIDVTKPVK

Specific function: Part of a binding-protein-dependent transport system for cystine [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1788228, Length=266, Percent_Identity=42.1052631578947, Blast_Score=211, Evalue=4e-56,
Organism=Escherichia coli, GI1788649, Length=263, Percent_Identity=32.319391634981, Blast_Score=121, Evalue=6e-29,
Organism=Escherichia coli, GI1788648, Length=236, Percent_Identity=31.7796610169492, Blast_Score=120, Evalue=8e-29,
Organism=Escherichia coli, GI1787085, Length=259, Percent_Identity=28.5714285714286, Blast_Score=114, Evalue=8e-27,
Organism=Escherichia coli, GI1787031, Length=257, Percent_Identity=32.6848249027237, Blast_Score=114, Evalue=9e-27,
Organism=Escherichia coli, GI1787088, Length=263, Percent_Identity=26.9961977186312, Blast_Score=98, Evalue=7e-22,

Paralogues:

None

Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015683
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 28253; Mature: 28253

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: PS01039 SBP_BACTERIAL_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIASLKKLLVTGLIGASFAAATAHAADLLDEVKQRGTLRIGLEGTFPPFNSKNPQGELV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEE
GFDVDIAKAIAAKLGVKPEFVTTEWSGIIAGLQAGKFDVIVNQVGITDPRKQTLDFSPAY
EECHHHHHHHHHHHCCCCCEEECCHHHHHHHCCCCCEEEEEEECCCCCCHHHCCCCCCCC
TFSSAQLIQRKDDARQFKSLEDLKGKKLGVALGTNYMDMAKSVPGIDVKTYPGAPEYLRD
CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHCCCCCEEEECCCCHHHHHH
LAAGRLDAALNDRLMLAYLTKNAQLPLRPGANVGSANPSGIPFKKGNPKFAKAIADAMTQ
HHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
LEADGTFTKISDKWFGIDVTKPVK
HCCCCCEEEECCCEEEEECCCCCC
>Mature Secondary Structure
MKIASLKKLLVTGLIGASFAAATAHAADLLDEVKQRGTLRIGLEGTFPPFNSKNPQGELV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEE
GFDVDIAKAIAAKLGVKPEFVTTEWSGIIAGLQAGKFDVIVNQVGITDPRKQTLDFSPAY
EECHHHHHHHHHHHCCCCCEEECCHHHHHHHCCCCCEEEEEEECCCCCCHHHCCCCCCCC
TFSSAQLIQRKDDARQFKSLEDLKGKKLGVALGTNYMDMAKSVPGIDVKTYPGAPEYLRD
CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHCCCCCEEEECCCCHHHHHH
LAAGRLDAALNDRLMLAYLTKNAQLPLRPGANVGSANPSGIPFKKGNPKFAKAIADAMTQ
HHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
LEADGTFTKISDKWFGIDVTKPVK
HCCCCCEEEECCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]