| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126455401
Identifier: 126455401
GI number: 126455401
Start: 1001206
End: 1001784
Strand: Direct
Name: 126455401
Synonym: BURPS1106A_1024
Alternate gene names: NA
Gene position: 1001206-1001784 (Clockwise)
Preceding gene: 126454054
Following gene: 126453441
Centisome position: 25.1
GC content: 76.17
Gene sequence:
>579_bases ATGACGCCGATCGGCGCGATGAAGCAACGGCAACCGAGCCGGCCGCCGCGGTTGCCGCGGCCGCTGCGGCCGCTGCGGCG GCGCCCGCGGCGCGCGACGCGGCGCTGGCGCCCGCCGACGAGATGCGCGCGCCGGCGCCCGCGGAAGCCGTCGTTCGCGT TGCCCGCGCCCGATCCGCTCGCGGTCGAACTGCCGACAGCCTACCCGGCGGACGCGACGTATGCGGACGAACTGCCCGCC GCGCATCCGGCGCCGGATCTCACGCCGCCCGCGGCGCTGCCGTCGTCGGTGCCCGAGCTCGCGCAGGCCGCGCCGTCGTT CGCCGCGGACCTCGAAGCGCGGCAGATCGCCGAGCGGCTGAAGAGCCGCATGACCCGCTACCTGACGGGGGAAGGGCGCG GCCTCATCGAGGCGCGCTGCCGCGATGCGCTGCACGATCATGCGGGCTGGCTCGTCGGCCAGATTGCGCGCGAAGTCGCG CTCGCGCTCGAGACCGAGGTCGCCGGCTGGGTGACGGAGGAAGTCGGCGCGGCGCTCGCGCGCCGCAACGCGCCCGCGCG AAGCGATACCACTCAATAG
Upstream 100 bases:
>100_bases GTGCTCGTGCCCGGCAATCCGGCGCTCGCGCGGCCGCCCGCCGCCGGGCCCGCGCAAGCGGGCGAGCCGGCCGCCGCCGC GATTCGGGCGGGCGAGGGCC
Downstream 100 bases:
>100_bases CGCCCCCGCCGTCGTTCGTTGTCTTCGTCCTCGTCGGTTGCGTCGTTCCTCACCGGCCGGACGGGGAGGCGGCGCGCGCC GGCATCGCGTTGCGCGCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MTPIGAMKQRQPSRPPRLPRPLRPLRRRPRRATRRWRPPTRCARRRPRKPSFALPAPDPLAVELPTAYPADATYADELPA AHPAPDLTPPAALPSSVPELAQAAPSFAADLEARQIAERLKSRMTRYLTGEGRGLIEARCRDALHDHAGWLVGQIAREVA LALETEVAGWVTEEVGAALARRNAPARSDTTQ
Sequences:
>Translated_192_residues MTPIGAMKQRQPSRPPRLPRPLRPLRRRPRRATRRWRPPTRCARRRPRKPSFALPAPDPLAVELPTAYPADATYADELPA AHPAPDLTPPAALPSSVPELAQAAPSFAADLEARQIAERLKSRMTRYLTGEGRGLIEARCRDALHDHAGWLVGQIAREVA LALETEVAGWVTEEVGAALARRNAPARSDTTQ >Mature_191_residues TPIGAMKQRQPSRPPRLPRPLRPLRRRPRRATRRWRPPTRCARRRPRKPSFALPAPDPLAVELPTAYPADATYADELPAA HPAPDLTPPAALPSSVPELAQAAPSFAADLEARQIAERLKSRMTRYLTGEGRGLIEARCRDALHDHAGWLVGQIAREVAL ALETEVAGWVTEEVGAALARRNAPARSDTTQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21156; Mature: 21025
Theoretical pI: Translated: 11.63; Mature: 11.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPIGAMKQRQPSRPPRLPRPLRPLRRRPRRATRRWRPPTRCARRRPRKPSFALPAPDPL CCCCCCHHHCCCCCCCCCCCCHHHHHHCHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCC AVELPTAYPADATYADELPAAHPAPDLTPPAALPSSVPELAQAAPSFAADLEARQIAERL EEECCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KSRMTRYLTGEGRGLIEARCRDALHDHAGWLVGQIAREVALALETEVAGWVTEEVGAALA HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRNAPARSDTTQ HCCCCCCCCCCC >Mature Secondary Structure TPIGAMKQRQPSRPPRLPRPLRPLRRRPRRATRRWRPPTRCARRRPRKPSFALPAPDPL CCCCCHHHCCCCCCCCCCCCHHHHHHCHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCC AVELPTAYPADATYADELPAAHPAPDLTPPAALPSSVPELAQAAPSFAADLEARQIAERL EEECCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KSRMTRYLTGEGRGLIEARCRDALHDHAGWLVGQIAREVALALETEVAGWVTEEVGAALA HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRNAPARSDTTQ HCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA