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The map label for this gene is gfcE [H]

Identifier: 126455396

GI number: 126455396

Start: 635995

End: 637284

Strand: Direct

Name: gfcE [H]

Synonym: BURPS1106A_0661

Alternate gene names: 126455396

Gene position: 635995-637284 (Clockwise)

Preceding gene: 126455454

Following gene: 126454245

Centisome position: 15.95

GC content: 68.91

Gene sequence:

>1290_bases
ATGTTCAAGCCCCTAGCATGGGCGAGCGCCGCGGCGCTCGCCTTGTCGGGCTGTGCGCTCGCCCCCGGGCCGGCGCTCGA
TTCGAGCCGCATGAACGACAATCTGAGCGCACCGACGGATTCGACGGTGTACGACGTCAAGCTGATCACGCCGCAGCTCG
TCTATACGCTCAAGCAGGCCGACGAGGCCGACACGCGCGCGAAGGAAGCAGGGCTCGCGCAGAGCCTGCCCGCGGCGAGC
GCCGACTATCGGGTCGGCCCGGACGACGTGCTCGGCATCGTCGTGTGGGATCACCCCGAACTCACGCGCGGCGGCGGCAA
CGGCACGGGCGCCGATACGTCGCCGCTCGCCGACATCGGCACGCTGCAGGCGTCGGGCGGCTTGGGCGGCGTGCTGCCGC
AGCAGGTCAGCGCATTCGGCACGAACGGGCAGGGCGAGGTCGACTCGCCGGGCCAGCGCGTCGCCGCCAACGGCACGATC
TTCTTCCCGACGCTCGGCCGCGTGCGCGTGGAGGGGATGAGCCCCGTGCAGATCGCCGCGCTGCTGGCGCGGCGCCTCGA
CAAGCAGATCAGGAATCCTCAGATCGACGTGCGCGTGATGCAGTACCGCAGCCAGCGCGTCCAGGTAACGGGCGACGTGA
AGAACCCCGGCCAGCTCTCGCTGACGGGCTCGCACCTGCGCGTGGTCGACGCGATCAACCGCGCGGGCGGCGGCAACCCG
GATGCGGATCTGCAGCGCGTGCTTCTCACGCGCGGCGATCAGGTGATGACGATCGACGTGAACCGCATCCTGAACCGCGG
CGACCTGCGCCAGAACATCGTGCTGCAGGCGAACGACATCGTGCACGTGCCCGATCGCACGCAGAACCGCGTGTTCGTGA
TGGGCGAGGTGCCGAAGCCGCAGACCGTCTACATGAACCAGGGGCAGTTGTCGCTCGCGGACGCGTTGAGCGCGGCGGGC
AGCATCGACCCGATGGGGGCGAATCCGCGCCAGGTGATCGTGATCCGCCATCCGAATCCGCCGCTCGCGCAGGCGCCGGG
CGTGCAGAGCGGCTTGCAGGAGGGCCTGAAGAAAGTCAGCTACGCGCCCGAGCGCAACAAGCCCGAAGTGTTCCGCCTCG
ACATGACGCAGGTGGACGCGCTGATGCTCGCGACCGAGTTCGACATGAAGCCGCTCGATGTCGTGTATGTCGGCACGGCG
CCCGCCGCGCGCTTTAACCGGATGCTCTCGCAGATCCTGCCGACCGCCGAGTCGTTCTATCTGATCTGGTCGGTGAGCCG
CGGCCGCTGA

Upstream 100 bases:

>100_bases
AGGGTTTCGTCGGCCGCAACGCATTCTGAGCCGGCGCGCGTTCGCCGCGAACGCGCGGCATTCCTTTTCGACGATCACGC
TACCAAGGAGAAACGACAAG

Downstream 100 bases:

>100_bases
CGCGCCGCGAGCGCGGCGCGCGGCGGCATTCGCACGCCGTGTGCCGCGTTGTGCGACGGAGCGCACAGACCGCGCGCCGC
GCAATGGCGACACTTGAACG

Product: capsular polysaccharide biosynthesis/export protein

Products: NA

Alternate protein names: Group 4 capsule protein E homolog [H]

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MFKPLAWASAAALALSGCALAPGPALDSSRMNDNLSAPTDSTVYDVKLITPQLVYTLKQADEADTRAKEAGLAQSLPAAS
ADYRVGPDDVLGIVVWDHPELTRGGGNGTGADTSPLADIGTLQASGGLGGVLPQQVSAFGTNGQGEVDSPGQRVAANGTI
FFPTLGRVRVEGMSPVQIAALLARRLDKQIRNPQIDVRVMQYRSQRVQVTGDVKNPGQLSLTGSHLRVVDAINRAGGGNP
DADLQRVLLTRGDQVMTIDVNRILNRGDLRQNIVLQANDIVHVPDRTQNRVFVMGEVPKPQTVYMNQGQLSLADALSAAG
SIDPMGANPRQVIVIRHPNPPLAQAPGVQSGLQEGLKKVSYAPERNKPEVFRLDMTQVDALMLATEFDMKPLDVVYVGTA
PAARFNRMLSQILPTAESFYLIWSVSRGR

Sequences:

>Translated_429_residues
MFKPLAWASAAALALSGCALAPGPALDSSRMNDNLSAPTDSTVYDVKLITPQLVYTLKQADEADTRAKEAGLAQSLPAAS
ADYRVGPDDVLGIVVWDHPELTRGGGNGTGADTSPLADIGTLQASGGLGGVLPQQVSAFGTNGQGEVDSPGQRVAANGTI
FFPTLGRVRVEGMSPVQIAALLARRLDKQIRNPQIDVRVMQYRSQRVQVTGDVKNPGQLSLTGSHLRVVDAINRAGGGNP
DADLQRVLLTRGDQVMTIDVNRILNRGDLRQNIVLQANDIVHVPDRTQNRVFVMGEVPKPQTVYMNQGQLSLADALSAAG
SIDPMGANPRQVIVIRHPNPPLAQAPGVQSGLQEGLKKVSYAPERNKPEVFRLDMTQVDALMLATEFDMKPLDVVYVGTA
PAARFNRMLSQILPTAESFYLIWSVSRGR
>Mature_429_residues
MFKPLAWASAAALALSGCALAPGPALDSSRMNDNLSAPTDSTVYDVKLITPQLVYTLKQADEADTRAKEAGLAQSLPAAS
ADYRVGPDDVLGIVVWDHPELTRGGGNGTGADTSPLADIGTLQASGGLGGVLPQQVSAFGTNGQGEVDSPGQRVAANGTI
FFPTLGRVRVEGMSPVQIAALLARRLDKQIRNPQIDVRVMQYRSQRVQVTGDVKNPGQLSLTGSHLRVVDAINRAGGGNP
DADLQRVLLTRGDQVMTIDVNRILNRGDLRQNIVLQANDIVHVPDRTQNRVFVMGEVPKPQTVYMNQGQLSLADALSAAG
SIDPMGANPRQVIVIRHPNPPLAQAPGVQSGLQEGLKKVSYAPERNKPEVFRLDMTQVDALMLATEFDMKPLDVVYVGTA
PAARFNRMLSQILPTAESFYLIWSVSRGR

Specific function: May be involved in polysaccharide transport [H]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BexD/CtrA/VexA family [H]

Homologues:

Organism=Escherichia coli, GI1787218, Length=423, Percent_Identity=32.8605200945626, Blast_Score=200, Evalue=2e-52,
Organism=Escherichia coli, GI1788376, Length=408, Percent_Identity=33.3333333333333, Blast_Score=194, Evalue=1e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003715
- InterPro:   IPR019554 [H]

Pfam domain/function: PF02563 Poly_export; PF10531 SLBB [H]

EC number: NA

Molecular weight: Translated: 45878; Mature: 45878

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKPLAWASAAALALSGCALAPGPALDSSRMNDNLSAPTDSTVYDVKLITPQLVYTLKQA
CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHC
DEADTRAKEAGLAQSLPAASADYRVGPDDVLGIVVWDHPELTRGGGNGTGADTSPLADIG
CCHHHHHHHCCHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHC
TLQASGGLGGVLPQQVSAFGTNGQGEVDSPGQRVAANGTIFFPTLGRVRVEGMSPVQIAA
EEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEECCEEEEECCCEEEECCCCHHHHHH
LLARRLDKQIRNPQIDVRVMQYRSQRVQVTGDVKNPGQLSLTGSHLRVVDAINRAGGGNP
HHHHHHHHHHCCCCEEEEEEEECCCEEEEEECCCCCCEEEEECCCEEEHHHHHHCCCCCC
DADLQRVLLTRGDQVMTIDVNRILNRGDLRQNIVLQANDIVHVPDRTQNRVFVMGEVPKP
CHHHHHHHHHCCCEEEEEEHHHHHCCCCCCCCEEEEECCEEECCCCCCCEEEEEECCCCC
QTVYMNQGQLSLADALSAAGSIDPMGANPRQVIVIRHPNPPLAQAPGVQSGLQEGLKKVS
CEEEEECCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHC
YAPERNKPEVFRLDMTQVDALMLATEFDMKPLDVVYVGTAPAARFNRMLSQILPTAESFY
CCCCCCCCCEEEEEHHHHHHEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEE
LIWSVSRGR
EEEEECCCC
>Mature Secondary Structure
MFKPLAWASAAALALSGCALAPGPALDSSRMNDNLSAPTDSTVYDVKLITPQLVYTLKQA
CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHC
DEADTRAKEAGLAQSLPAASADYRVGPDDVLGIVVWDHPELTRGGGNGTGADTSPLADIG
CCHHHHHHHCCHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHC
TLQASGGLGGVLPQQVSAFGTNGQGEVDSPGQRVAANGTIFFPTLGRVRVEGMSPVQIAA
EEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEECCEEEEECCCEEEECCCCHHHHHH
LLARRLDKQIRNPQIDVRVMQYRSQRVQVTGDVKNPGQLSLTGSHLRVVDAINRAGGGNP
HHHHHHHHHHCCCCEEEEEEEECCCEEEEEECCCCCCEEEEECCCEEEHHHHHHCCCCCC
DADLQRVLLTRGDQVMTIDVNRILNRGDLRQNIVLQANDIVHVPDRTQNRVFVMGEVPKP
CHHHHHHHHHCCCEEEEEEHHHHHCCCCCCCCEEEEECCEEECCCCCCCEEEEEECCCCC
QTVYMNQGQLSLADALSAAGSIDPMGANPRQVIVIRHPNPPLAQAPGVQSGLQEGLKKVS
CEEEEECCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHC
YAPERNKPEVFRLDMTQVDALMLATEFDMKPLDVVYVGTAPAARFNRMLSQILPTAESFY
CCCCCCCCCEEEEEHHHHHHEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEE
LIWSVSRGR
EEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]