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The map label for this gene is rfbU [H]

Identifier: 126454245

GI number: 126454245

Start: 637465

End: 638709

Strand: Direct

Name: rfbU [H]

Synonym: BURPS1106A_0662

Alternate gene names: 126454245

Gene position: 637465-638709 (Clockwise)

Preceding gene: 126455396

Following gene: 126454954

Centisome position: 15.98

GC content: 68.76

Gene sequence:

>1245_bases
ATGAATCTGTCTTCCCCGTTATCCAAGCCGTCGCCTCGCGTGCGGCGAGATCGTCAGGACTTCGATGTAACTACGCCGAG
CGTGTCGCAAGCCGCGGGCGTGCTGCGCGATGCGCCGCCGCGCGCCGCGTTCGCCGGCGACCATGCGGGCGTGGCGGCAT
TGCCGAGGCCCGTCGCGATCAACGGCAAGTTCACGTCGCAACGCCTGACGGGCGTGCAGCGCGTCGCGCACGAATTCACG
TCCGCGCTCGCGCGGCTACTGCCGGGCGAGCGCAACCCGACGCTCGTCGTGCCGCGCGATCACGCGAGCGATACGTTGCC
GCCCACGGTCGCGAGGCGCGTCGTTCCGCGTCTGCGCGGCGCGCTCTGGGAGCAGCTCGCGCTGCCGTTCGCGACACGCG
GGCAGACGCTCGTGAGCCTATGCAACATCGGCCCGCTCTTCAAGCGCAATCAGGTCGTGATGATTCACGACGTCGCCGTG
CTCGATTTTCCGCAGGGCTATTCGCTCAAGTTCCGGCTCTGGTATCGCTTCGCGTTCTGGATGCTCAAGCGCCGCGCGCG
GCACATCCTGACGGTGTCGCGTTTCTCGAAGGAGCGGATCGTCGCGCGTCTGGGCGTGGCGCCCACCGACGTGTCGACGA
TCGTCTCCGGCGTCGACCACTTCGGCCGCATCGAGGGCGACCCGTCGGTGCTCGATCGGCTCGGCCTCGCCTACGACGGC
TACGTGCTGATCGTCGGCTCGCTCGCGCCCGGCAAGAATCTCGCGCGCACGCTCGAGGCGATCGCGCGGCTCGAGCGCAT
GCGCCCCGAGCTCAGATTCGTGATCGCGGGCGGCAGCAACGTGAGGATCTTCGGCGCATCGGCGCTCGGCGAGCGCGCGA
GCGCGGGCAACGTCACGTGGGCCGGCTACGTCAGCGACGGCGAGTTGAAGGCGCTCTACGAGAACGCCGGCTGCTTCGTG
TTTCCTTCGCTATACGAAGGATTCGGCCTGCCGCCGCTCGAGGCGATGTATTGCGGGTGCCCGGTGATCGTGTCGCGCGA
GGCATCGCTGCCCGAGGCGTGCGGCGACGCCGCGCTGTATTGCGACGCGCACGATGCGATCGACATCGCGGCAACGATCG
CGCAATTGATGGGCGATGCCGAGCTGCGGCGCGAGCTGCGCGAGAAAGGGCGTGCGCGCGCGTCGCGGTATCGCTGGGAC
GCCGCCGCGAAGCAACTGATCGGCGTGCTGCGCGCGCTCGATTGA

Upstream 100 bases:

>100_bases
GCAATGGCGACACTTGAACGCATAGAGCGCGCATCCGCGAACGCCGCGAACGCCGCGGATGCGCCCGTCAACCGGGTGCC
GTCACGCCGCAGCTGCCGCC

Downstream 100 bases:

>100_bases
CGCCGCGCGCCGGCTGCCCGCGCGGACCTCAGAAGCGGTAGCCGAGCCCGGCCTGAATCACGTCGGTATCGCGATCGTAG
CGCGTGACGACGCGATTCCA

Product: glycosyl transferase, group 1 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MNLSSPLSKPSPRVRRDRQDFDVTTPSVSQAAGVLRDAPPRAAFAGDHAGVAALPRPVAINGKFTSQRLTGVQRVAHEFT
SALARLLPGERNPTLVVPRDHASDTLPPTVARRVVPRLRGALWEQLALPFATRGQTLVSLCNIGPLFKRNQVVMIHDVAV
LDFPQGYSLKFRLWYRFAFWMLKRRARHILTVSRFSKERIVARLGVAPTDVSTIVSGVDHFGRIEGDPSVLDRLGLAYDG
YVLIVGSLAPGKNLARTLEAIARLERMRPELRFVIAGGSNVRIFGASALGERASAGNVTWAGYVSDGELKALYENAGCFV
FPSLYEGFGLPPLEAMYCGCPVIVSREASLPEACGDAALYCDAHDAIDIAATIAQLMGDAELRRELREKGRARASRYRWD
AAAKQLIGVLRALD

Sequences:

>Translated_414_residues
MNLSSPLSKPSPRVRRDRQDFDVTTPSVSQAAGVLRDAPPRAAFAGDHAGVAALPRPVAINGKFTSQRLTGVQRVAHEFT
SALARLLPGERNPTLVVPRDHASDTLPPTVARRVVPRLRGALWEQLALPFATRGQTLVSLCNIGPLFKRNQVVMIHDVAV
LDFPQGYSLKFRLWYRFAFWMLKRRARHILTVSRFSKERIVARLGVAPTDVSTIVSGVDHFGRIEGDPSVLDRLGLAYDG
YVLIVGSLAPGKNLARTLEAIARLERMRPELRFVIAGGSNVRIFGASALGERASAGNVTWAGYVSDGELKALYENAGCFV
FPSLYEGFGLPPLEAMYCGCPVIVSREASLPEACGDAALYCDAHDAIDIAATIAQLMGDAELRRELREKGRARASRYRWD
AAAKQLIGVLRALD
>Mature_414_residues
MNLSSPLSKPSPRVRRDRQDFDVTTPSVSQAAGVLRDAPPRAAFAGDHAGVAALPRPVAINGKFTSQRLTGVQRVAHEFT
SALARLLPGERNPTLVVPRDHASDTLPPTVARRVVPRLRGALWEQLALPFATRGQTLVSLCNIGPLFKRNQVVMIHDVAV
LDFPQGYSLKFRLWYRFAFWMLKRRARHILTVSRFSKERIVARLGVAPTDVSTIVSGVDHFGRIEGDPSVLDRLGLAYDG
YVLIVGSLAPGKNLARTLEAIARLERMRPELRFVIAGGSNVRIFGASALGERASAGNVTWAGYVSDGELKALYENAGCFV
FPSLYEGFGLPPLEAMYCGCPVIVSREASLPEACGDAALYCDAHDAIDIAATIAQLMGDAELRRELREKGRARASRYRWD
AAAKQLIGVLRALD

Specific function: Unknown

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 45223; Mature: 45223

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLSSPLSKPSPRVRRDRQDFDVTTPSVSQAAGVLRDAPPRAAFAGDHAGVAALPRPVAI
CCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCEEE
NGKFTSQRLTGVQRVAHEFTSALARLLPGERNPTLVVPRDHASDTLPPTVARRVVPRLRG
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHH
ALWEQLALPFATRGQTLVSLCNIGPLFKRNQVVMIHDVAVLDFPQGYSLKFRLWYRFAFW
HHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCEEEEEEEEEEECCCCCCEEEHHHHHHHHH
MLKRRARHILTVSRFSKERIVARLGVAPTDVSTIVSGVDHFGRIEGDPSVLDRLGLAYDG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCC
YVLIVGSLAPGKNLARTLEAIARLERMRPELRFVIAGGSNVRIFGASALGERASAGNVTW
EEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEECHHCCCCCCCCCEEE
AGYVSDGELKALYENAGCFVFPSLYEGFGLPPLEAMYCGCPVIVSREASLPEACGDAALY
EEEECCCCCHHHHHCCCCEEECHHHCCCCCCCHHHHHCCCCEEEECCCCCCHHCCCCEEE
CDAHDAIDIAATIAQLMGDAELRRELREKGRARASRYRWDAAAKQLIGVLRALD
ECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNLSSPLSKPSPRVRRDRQDFDVTTPSVSQAAGVLRDAPPRAAFAGDHAGVAALPRPVAI
CCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCEEE
NGKFTSQRLTGVQRVAHEFTSALARLLPGERNPTLVVPRDHASDTLPPTVARRVVPRLRG
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHH
ALWEQLALPFATRGQTLVSLCNIGPLFKRNQVVMIHDVAVLDFPQGYSLKFRLWYRFAFW
HHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCEEEEEEEEEEECCCCCCEEEHHHHHHHHH
MLKRRARHILTVSRFSKERIVARLGVAPTDVSTIVSGVDHFGRIEGDPSVLDRLGLAYDG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCC
YVLIVGSLAPGKNLARTLEAIARLERMRPELRFVIAGGSNVRIFGASALGERASAGNVTW
EEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEECHHCCCCCCCCCEEE
AGYVSDGELKALYENAGCFVFPSLYEGFGLPPLEAMYCGCPVIVSREASLPEACGDAALY
EEEECCCCCHHHHHCCCCEEECHHHCCCCCCCHHHHHCCCCEEEECCCCCCHHCCCCEEE
CDAHDAIDIAATIAQLMGDAELRRELREKGRARASRYRWDAAAKQLIGVLRALD
ECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1710759; 11677609 [H]