| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126455337
Identifier: 126455337
GI number: 126455337
Start: 660146
End: 660793
Strand: Direct
Name: 126455337
Synonym: BURPS1106A_0685
Alternate gene names: NA
Gene position: 660146-660793 (Clockwise)
Preceding gene: 126454670
Following gene: 126451540
Centisome position: 16.55
GC content: 69.75
Gene sequence:
>648_bases ATGACCCTTGCCGCCAAGCCCTTTGCCGCCGCCGTCAATCACCTGCTCGCCCGTGAATCCTGGGCGCGCGATCGTCTGAT TCCCTATGCCGGCAAGATCGCCCGGCTCGAAATTTCGCCCGTGACGCTCGTGCTGCTCGTGCAGCCGGACGGCTATCTCG CCGCGGTCGAAGCGCACGACGCGCGCCGGTTCGACGTGTCGATCGCGCTGTCGAGCGCCGCCGACGGCGGCGCGTTCGAT GCGGCGGCCGCGTTCCTGCAAGGCGGGCAGGCGGCCGTGATGAAGCACGTGAAGATCGACGGCGACGCGGAGTTCGCCAC GCAGATCGCGAAGCTCGCCGAGCATCTGCGCTGGGAGCCGGAGGAGGATCTCTCGAGTGTCGTCGGCGACGCGGCCGCGC ACCGGATCGCGACCGTCGTCCGCTCGGCGGGCGCGCGCGCGCGCCGCACGGGCCGCAACGTGCTCGATTCGATCGCCGAA TACTGGCTCGACGAAAACCCGCAGGTCGTGCGCAAGAGCGCGCTCGCCGATTTCGACGCCGGGCTCGCGCGCGCGCGCGA TACGCTCGCGCGCGTCGAAAAACGCATCGAACGACTGGAACAAAAAATCGACGTGCGCGCGGGCGGCAGCTCGCGACGCG CGCAGTGA
Upstream 100 bases:
>100_bases CGGGCCGCGCGTCGTGCGTCGCGAGGCCGCGCCCGAACCGACGTTACAATAGAAGCCCGCGCAGGCGCCCTGCTTGCGCG GGTTTTTCATTGCCAGCCCG
Downstream 100 bases:
>100_bases GGGCCGCGAGGCATGCGCATTTTCCGTTTCGTCAAAATCGTCTTCACCGTCATCCGCTTCGGCCTCGACGAGGTCATGCT GTCGCGCATCGAGAACCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 215; Mature: 214
Protein sequence:
>215_residues MTLAAKPFAAAVNHLLARESWARDRLIPYAGKIARLEISPVTLVLLVQPDGYLAAVEAHDARRFDVSIALSSAADGGAFD AAAAFLQGGQAAVMKHVKIDGDAEFATQIAKLAEHLRWEPEEDLSSVVGDAAAHRIATVVRSAGARARRTGRNVLDSIAE YWLDENPQVVRKSALADFDAGLARARDTLARVEKRIERLEQKIDVRAGGSSRRAQ
Sequences:
>Translated_215_residues MTLAAKPFAAAVNHLLARESWARDRLIPYAGKIARLEISPVTLVLLVQPDGYLAAVEAHDARRFDVSIALSSAADGGAFD AAAAFLQGGQAAVMKHVKIDGDAEFATQIAKLAEHLRWEPEEDLSSVVGDAAAHRIATVVRSAGARARRTGRNVLDSIAE YWLDENPQVVRKSALADFDAGLARARDTLARVEKRIERLEQKIDVRAGGSSRRAQ >Mature_214_residues TLAAKPFAAAVNHLLARESWARDRLIPYAGKIARLEISPVTLVLLVQPDGYLAAVEAHDARRFDVSIALSSAADGGAFDA AAAFLQGGQAAVMKHVKIDGDAEFATQIAKLAEHLRWEPEEDLSSVVGDAAAHRIATVVRSAGARARRTGRNVLDSIAEY WLDENPQVVRKSALADFDAGLARARDTLARVEKRIERLEQKIDVRAGGSSRRAQ
Specific function: Unknown
COG id: COG3165
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23231; Mature: 23099
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLAAKPFAAAVNHLLARESWARDRLIPYAGKIARLEISPVTLVLLVQPDGYLAAVEAHD CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCEEEEEEECCCCCEEEEECCC ARRFDVSIALSSAADGGAFDAAAAFLQGGQAAVMKHVKIDGDAEFATQIAKLAEHLRWEP CEEEEEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC EEDLSSVVGDAAAHRIATVVRSAGARARRTGRNVLDSIAEYWLDENPQVVRKSALADFDA HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH GLARARDTLARVEKRIERLEQKIDVRAGGSSRRAQ HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TLAAKPFAAAVNHLLARESWARDRLIPYAGKIARLEISPVTLVLLVQPDGYLAAVEAHD CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCEEEEEEECCCCCEEEEECCC ARRFDVSIALSSAADGGAFDAAAAFLQGGQAAVMKHVKIDGDAEFATQIAKLAEHLRWEP CEEEEEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC EEDLSSVVGDAAAHRIATVVRSAGARARRTGRNVLDSIAEYWLDENPQVVRKSALADFDA HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH GLARARDTLARVEKRIERLEQKIDVRAGGSSRRAQ HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA