Definition Burkholderia pseudomallei 1106a chromosome I, complete genome.
Accession NC_009076
Length 3,988,455

Click here to switch to the map view.

The map label for this gene is 126455330

Identifier: 126455330

GI number: 126455330

Start: 754643

End: 755320

Strand: Direct

Name: 126455330

Synonym: BURPS1106A_0774

Alternate gene names: NA

Gene position: 754643-755320 (Clockwise)

Preceding gene: 126455230

Following gene: 126451694

Centisome position: 18.92

GC content: 72.71

Gene sequence:

>678_bases
ATGCAGATTCATGAAGTACGCATACCCATCGGAAAAGTCGAACTGAACGGCCTGCTCGCGGCGCCCGAGCAGGCATCGGG
CATCGTCGTGTTCGCGCACGGCAGCGGCAGCAGCCGGCTCAGCCCGCGCAACCAGGAAGTCGCGGCGGTATTGCAGCGCG
CGGGGCTCGCGACGCTCCTGTTCGATCTGCTGACGCTCGAGGAGCAGCGGCGCGACGCGGTCACGGCCGAGTACCGGTTC
GCGATCGCGTTTCTCGCGCGCCGGCTCGTGAGCGCGCTCGACTGGCTGCGCGAGCGGCCGGACGTCGGCGCGTTGCCCGT
CGGGCTGTTCGGCGCGAGCACGGGCGCGGCGGCCGCGCTGATCGCGGCGAACGCGCGCGGGCGCGTCGTGCGCGCGGTCG
TCTCGCGCGGCGGGCGTCCCGATCTCGCCGGCGATGCGTTGCCGCGCGTGCGCGTGCCGACGCTGCTCGTCGTCGGCGAG
CGCGACGACGAAGTGCTCCGGCTGAACCGCGTCGCGGCCGGCTGGCTGATCGGCGAATCGAAGCTCGTCGTCGTGCCGGG
CGCGACGCATCTGTTCGAGGAGCCGGGCACGCTCGACGAAGTCGCGCGCGTCGCGGCCGACTGGTTCGTCGCGCATCTCG
GCGAGGGCCGGCCATCGCCCGAAGGGGCGCGAAGATGA

Upstream 100 bases:

>100_bases
GAAACGAACCCGCTCGAACCGCTCGCGCCGCCCGGCGCGCGGCAGCCGCGCGAGACGCCGGTGTCCGCGCCGTGACGGCG
AGGCGGACGTGGAGAACGCA

Downstream 100 bases:

>100_bases
GGGCGAAGCCTGCCTGCACGCGGGCGCTGCTCGCCGACCTGTACGAATTCACGATGCTGCAGTCGTACTTCGACTGCGGG
ATGAACGATACGGCGACGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MQIHEVRIPIGKVELNGLLAAPEQASGIVVFAHGSGSSRLSPRNQEVAAVLQRAGLATLLFDLLTLEEQRRDAVTAEYRF
AIAFLARRLVSALDWLRERPDVGALPVGLFGASTGAAAALIAANARGRVVRAVVSRGGRPDLAGDALPRVRVPTLLVVGE
RDDEVLRLNRVAAGWLIGESKLVVVPGATHLFEEPGTLDEVARVAADWFVAHLGEGRPSPEGARR

Sequences:

>Translated_225_residues
MQIHEVRIPIGKVELNGLLAAPEQASGIVVFAHGSGSSRLSPRNQEVAAVLQRAGLATLLFDLLTLEEQRRDAVTAEYRF
AIAFLARRLVSALDWLRERPDVGALPVGLFGASTGAAAALIAANARGRVVRAVVSRGGRPDLAGDALPRVRVPTLLVVGE
RDDEVLRLNRVAAGWLIGESKLVVVPGATHLFEEPGTLDEVARVAADWFVAHLGEGRPSPEGARR
>Mature_225_residues
MQIHEVRIPIGKVELNGLLAAPEQASGIVVFAHGSGSSRLSPRNQEVAAVLQRAGLATLLFDLLTLEEQRRDAVTAEYRF
AIAFLARRLVSALDWLRERPDVGALPVGLFGASTGAAAALIAANARGRVVRAVVSRGGRPDLAGDALPRVRVPTLLVVGE
RDDEVLRLNRVAAGWLIGESKLVVVPGATHLFEEPGTLDEVARVAADWFVAHLGEGRPSPEGARR

Specific function: Unknown

COG id: COG1926

COG function: function code R; Predicted phosphoribosyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the dienelactone hydrolase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002925
- InterPro:   IPR000836 [H]

Pfam domain/function: PF01738 DLH; PF00156 Pribosyltran [H]

EC number: NA

Molecular weight: Translated: 23992; Mature: 23992

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIHEVRIPIGKVELNGLLAAPEQASGIVVFAHGSGSSRLSPRNQEVAAVLQRAGLATLL
CCCEEEECCCCEEEECCEEECCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCHHHHH
FDLLTLEEQRRDAVTAEYRFAIAFLARRLVSALDWLRERPDVGALPVGLFGASTGAAAAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHEE
IAANARGRVVRAVVSRGGRPDLAGDALPRVRVPTLLVVGERDDEVLRLNRVAAGWLIGES
EECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHEEEECCC
KLVVVPGATHLFEEPGTLDEVARVAADWFVAHLGEGRPSPEGARR
CEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MQIHEVRIPIGKVELNGLLAAPEQASGIVVFAHGSGSSRLSPRNQEVAAVLQRAGLATLL
CCCEEEECCCCEEEECCEEECCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCHHHHH
FDLLTLEEQRRDAVTAEYRFAIAFLARRLVSALDWLRERPDVGALPVGLFGASTGAAAAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHEE
IAANARGRVVRAVVSRGGRPDLAGDALPRVRVPTLLVVGERDDEVLRLNRVAAGWLIGES
EECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHEEEECCC
KLVVVPGATHLFEEPGTLDEVARVAADWFVAHLGEGRPSPEGARR
CEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]