Click here to switch to the map view.

The map label for this gene is yitW [H]

Identifier: 126451979

GI number: 126451979

Start: 2705824

End: 2706168

Strand: Direct

Name: yitW [H]

Synonym: BURPS1106A_2739

Alternate gene names: 126451979

Gene position: 2705824-2706168 (Clockwise)

Preceding gene: 126452795

Following gene: 126455320

Centisome position: 67.84

GC content: 65.22

Gene sequence:

>345_bases
ATGTCGAATTCCTCAGCCATCCGAAGCGAAAGCGAAACGCCCGACGAACGCGCGTTGCGCGAAGCACTCAAGGAAGTCAT
CGATCCGGAGATCGGCGTCAACATCGTCGACCTCGGTCTCGTCTACCGCATCGAGCGCACCGAAGCGCGCATCGTCGTGA
CGATGACGATGACGTCGCCCGCCTGTCCGATGGCGGGCGTCGTGATCGACGACGTGCAGGCGACGCTCGGCGAGCTCACC
TCCGACGCGCTGCCCGTCGACGTCGATCTCGTCTGGGAACCCCCGTGGGCGCCGAAGATGATGAGCGAGGCCGCGCGCGA
GCAGATGGGCTGGCCGATCGCTTGA

Upstream 100 bases:

>100_bases
CAGGCCGCGCAACGCACGTAAGCGTCGCGGCGCATCGCCGGCGGGCCGTGCACGTCGCACGGCCCGCCGGCCTCCTCCCC
CCGTTTCGTTCGGAGCCATC

Downstream 100 bases:

>100_bases
CACATCGTTCACGCATCGTTCCCCCCCTCTGTCGCGCATCGCGCGCTCGACGCCATGCCCGCCGCCAAGCAACCGGCCGC
TTCGCTCGCCCGCCCGCTCG

Product: phenylacetic acid degradation protein paaD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MSNSSAIRSESETPDERALREALKEVIDPEIGVNIVDLGLVYRIERTEARIVVTMTMTSPACPMAGVVIDDVQATLGELT
SDALPVDVDLVWEPPWAPKMMSEAAREQMGWPIA

Sequences:

>Translated_114_residues
MSNSSAIRSESETPDERALREALKEVIDPEIGVNIVDLGLVYRIERTEARIVVTMTMTSPACPMAGVVIDDVQATLGELT
SDALPVDVDLVWEPPWAPKMMSEAAREQMGWPIA
>Mature_113_residues
SNSSAIRSESETPDERALREALKEVIDPEIGVNIVDLGLVYRIERTEARIVVTMTMTSPACPMAGVVIDDVQATLGELTS
DALPVDVDLVWEPPWAPKMMSEAAREQMGWPIA

Specific function: Unknown

COG id: COG2151

COG function: function code R; Predicted metal-sulfur cluster biosynthetic enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MIP18 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002744 [H]

Pfam domain/function: PF01883 DUF59 [H]

EC number: NA

Molecular weight: Translated: 12482; Mature: 12351

Theoretical pI: Translated: 3.96; Mature: 3.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNSSAIRSESETPDERALREALKEVIDPEIGVNIVDLGLVYRIERTEARIVVTMTMTSP
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCEEEEEEEECCCC
ACPMAGVVIDDVQATLGELTSDALPVDVDLVWEPPWAPKMMSEAAREQMGWPIA
CCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SNSSAIRSESETPDERALREALKEVIDPEIGVNIVDLGLVYRIERTEARIVVTMTMTSP
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCEEEEEEEECCCC
ACPMAGVVIDDVQATLGELTSDALPVDVDLVWEPPWAPKMMSEAAREQMGWPIA
CCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353931; 9025291; 9384377 [H]