| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is aqpZ [H]
Identifier: 126455312
GI number: 126455312
Start: 3851469
End: 3852173
Strand: Direct
Name: aqpZ [H]
Synonym: BURPS1106A_3945
Alternate gene names: 126455312
Gene position: 3851469-3852173 (Clockwise)
Preceding gene: 126454592
Following gene: 126453188
Centisome position: 96.57
GC content: 68.79
Gene sequence:
>705_bases ATGAAATTACCTCAGCGTCTCGCAGCGGAAGTGTTCGGCACGTTCTGGCTCGTCCTCGGCGGCTGTGGCAGCGCCGTCCT GGCGGCCGCCTTTCCGGGCCTGGGCATCGGCTTTGCCGGCGTCGCATTGGCGTTCGGCCTGACCGTTCTGACGATGGCGT TCGCCATCGGCCATGTCTCCGGATGCCACCTGAACCCGGCCGTGAGCGTCGGCCTGACGGTGGCGGGACGTTTCCCGGCC CGCGATCTCGTGCCGTACGTCATCGCGCAGGTCATCGGCGCCACGCTCGGCGCGTTCGTGCTCTATCTGATCGCGACCGG CAAGCCGGGCTTCGACGTCGCCGGCAGCGGCTTCGCGACGAACGGCTATGACGCGCGCTCGCCCGGCCATTACTCGCTCG CCGCCGCATTCATCTGCGAAGTCGTGCTGACGGGCTTCTTCCTGTTCGTGATCCTCGGCTCGACCGACAAGCGCGCGCCG GCCGGCTTCGCGCCGATCGCGATCGGCCTGTGCCTCACGCTGATCCACCTGATCTCGATCCCGGTGACGAACACGTCGGT GAACCCGGCGCGCTCGACGGGCCCGGCGCTGTTCGTCGGGAGCGAGGCGATCGGCCAGCTGTGGCTGTTCTGGGTGGCGC CCATCATCGGCGCGGCGATCGCGGGGGTCGTCTACCCGCTCGTCGCGGGACGCGACGAAAGCTGA
Upstream 100 bases:
>100_bases AACCCGTAGGATTTCCTATAATCCAGGCGGCACGCGTGGATGCGTCCCTGCTTTTTACGGCGCCATCCGTTTTCAATTTT CACGACCAGGAACTACTCCA
Downstream 100 bases:
>100_bases CGAGGATGTGGCCGGACGCGCGCCGTCCGGCCCGCCCTCGCCACACCGGGCAACACGATAGAGGAACACGAAAGACCATC CCGCGCCGGCCGACGGCAGC
Product: aquaporin Z
Products: H2O [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MKLPQRLAAEVFGTFWLVLGGCGSAVLAAAFPGLGIGFAGVALAFGLTVLTMAFAIGHVSGCHLNPAVSVGLTVAGRFPA RDLVPYVIAQVIGATLGAFVLYLIATGKPGFDVAGSGFATNGYDARSPGHYSLAAAFICEVVLTGFFLFVILGSTDKRAP AGFAPIAIGLCLTLIHLISIPVTNTSVNPARSTGPALFVGSEAIGQLWLFWVAPIIGAAIAGVVYPLVAGRDES
Sequences:
>Translated_234_residues MKLPQRLAAEVFGTFWLVLGGCGSAVLAAAFPGLGIGFAGVALAFGLTVLTMAFAIGHVSGCHLNPAVSVGLTVAGRFPA RDLVPYVIAQVIGATLGAFVLYLIATGKPGFDVAGSGFATNGYDARSPGHYSLAAAFICEVVLTGFFLFVILGSTDKRAP AGFAPIAIGLCLTLIHLISIPVTNTSVNPARSTGPALFVGSEAIGQLWLFWVAPIIGAAIAGVVYPLVAGRDES >Mature_234_residues MKLPQRLAAEVFGTFWLVLGGCGSAVLAAAFPGLGIGFAGVALAFGLTVLTMAFAIGHVSGCHLNPAVSVGLTVAGRFPA RDLVPYVIAQVIGATLGAFVLYLIATGKPGFDVAGSGFATNGYDARSPGHYSLAAAFICEVVLTGFFLFVILGSTDKRAP AGFAPIAIGLCLTLIHLISIPVTNTSVNPARSTGPALFVGSEAIGQLWLFWVAPIIGAAIAGVVYPLVAGRDES
Specific function: Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response
COG id: COG0580
COG function: function code G; Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family)
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MIP/aquaporin (TC 1.A.8) family [H]
Homologues:
Organism=Homo sapiens, GI4502183, Length=219, Percent_Identity=36.5296803652968, Blast_Score=107, Evalue=1e-23, Organism=Homo sapiens, GI37694062, Length=190, Percent_Identity=34.7368421052632, Blast_Score=107, Evalue=1e-23, Organism=Homo sapiens, GI4755125, Length=190, Percent_Identity=36.8421052631579, Blast_Score=106, Evalue=2e-23, Organism=Homo sapiens, GI4502181, Length=190, Percent_Identity=36.8421052631579, Blast_Score=105, Evalue=3e-23, Organism=Homo sapiens, GI4502179, Length=222, Percent_Identity=32.8828828828829, Blast_Score=97, Evalue=1e-20, Organism=Homo sapiens, GI6912506, Length=224, Percent_Identity=33.0357142857143, Blast_Score=96, Evalue=2e-20, Organism=Homo sapiens, GI86792455, Length=188, Percent_Identity=34.0425531914894, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI157266307, Length=246, Percent_Identity=33.739837398374, Blast_Score=86, Evalue=2e-17, Organism=Homo sapiens, GI4826645, Length=249, Percent_Identity=33.3333333333333, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI45446752, Length=211, Percent_Identity=28.436018957346, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI22538420, Length=247, Percent_Identity=29.9595141700405, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI4502187, Length=242, Percent_Identity=28.5123966942149, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI297307120, Length=91, Percent_Identity=38.4615384615385, Blast_Score=64, Evalue=1e-10, Organism=Escherichia coli, GI1787101, Length=207, Percent_Identity=71.4975845410628, Blast_Score=288, Evalue=2e-79, Organism=Escherichia coli, GI1790362, Length=260, Percent_Identity=28.0769230769231, Blast_Score=75, Evalue=4e-15, Organism=Caenorhabditis elegans, GI71993722, Length=204, Percent_Identity=31.8627450980392, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI71992966, Length=238, Percent_Identity=30.2521008403361, Blast_Score=88, Evalue=5e-18, Organism=Caenorhabditis elegans, GI17558372, Length=204, Percent_Identity=31.3725490196078, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI71992961, Length=236, Percent_Identity=29.2372881355932, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17531431, Length=235, Percent_Identity=31.063829787234, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17531429, Length=235, Percent_Identity=31.063829787234, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71994009, Length=238, Percent_Identity=28.5714285714286, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI24652747, Length=239, Percent_Identity=34.7280334728033, Blast_Score=122, Evalue=2e-28, Organism=Drosophila melanogaster, GI45551084, Length=239, Percent_Identity=34.7280334728033, Blast_Score=122, Evalue=2e-28, Organism=Drosophila melanogaster, GI19922038, Length=232, Percent_Identity=30.6034482758621, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI24652751, Length=232, Percent_Identity=30.6034482758621, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI24762344, Length=225, Percent_Identity=30.6666666666667, Blast_Score=74, Evalue=9e-14, Organism=Drosophila melanogaster, GI24762346, Length=225, Percent_Identity=30.6666666666667, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24762348, Length=225, Percent_Identity=30.6666666666667, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI20130305, Length=225, Percent_Identity=30.6666666666667, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24762342, Length=202, Percent_Identity=28.7128712871287, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI45550503, Length=227, Percent_Identity=27.3127753303965, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012269 - InterPro: IPR000425 - InterPro: IPR022357 [H]
Pfam domain/function: PF00230 MIP [H]
EC number: NA
Molecular weight: Translated: 23820; Mature: 23820
Theoretical pI: Translated: 7.97; Mature: 7.97
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00221 MIP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLPQRLAAEVFGTFWLVLGGCGSAVLAAAFPGLGIGFAGVALAFGLTVLTMAFAIGHVS CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC GCHLNPAVSVGLTVAGRFPARDLVPYVIAQVIGATLGAFVLYLIATGKPGFDVAGSGFAT CCCCCCHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC NGYDARSPGHYSLAAAFICEVVLTGFFLFVILGSTDKRAPAGFAPIAIGLCLTLIHLISI CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHC PVTNTSVNPARSTGPALFVGSEAIGQLWLFWVAPIIGAAIAGVVYPLVAGRDES CCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKLPQRLAAEVFGTFWLVLGGCGSAVLAAAFPGLGIGFAGVALAFGLTVLTMAFAIGHVS CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC GCHLNPAVSVGLTVAGRFPARDLVPYVIAQVIGATLGAFVLYLIATGKPGFDVAGSGFAT CCCCCCHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC NGYDARSPGHYSLAAAFICEVVLTGFFLFVILGSTDKRAPAGFAPIAIGLCLTLIHLISI CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHC PVTNTSVNPARSTGPALFVGSEAIGQLWLFWVAPIIGAAIAGVVYPLVAGRDES CCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: H2O [Periplasm] [C]
Specific reaction: H2O [Periplasm] = H2O [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 14500782 [H]