Definition Burkholderia pseudomallei 1106a chromosome I, complete genome.
Accession NC_009076
Length 3,988,455

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The map label for this gene is 126455257

Identifier: 126455257

GI number: 126455257

Start: 2154879

End: 2155442

Strand: Reverse

Name: 126455257

Synonym: BURPS1106A_2170

Alternate gene names: NA

Gene position: 2155442-2154879 (Counterclockwise)

Preceding gene: 126452610

Following gene: 126454323

Centisome position: 54.04

GC content: 67.55

Gene sequence:

>564_bases
ATGCATTCCGATCGCATTGCCCGTCTCAGCCAGCGAATGGCCGCCGCCACCCTTTGCTTCATCGTCGCGATGATGCTGCT
CAACGCCGCGTGCTGGGCCTTTCCGTCGTTGAACTCGGTGAAGTCGGGCGCGGGTCTCGGTTTCGGCCTGACCGATTCGC
TGATCGGGAGCCTGAAGGTCGATGTCGCCGCGTTCCCGTGGTGGCAGAAGGCGGGCGGCATCGTACTGTCGAGCGTGCCG
CTCGTCGCGCTCGCAAGCGGCCTGCGCCATCTGCGCGCGCTGTTTCGCACCTATGCGCGCCGCGATTACTTCTCGGCGCA
AGCGGCGCGCCATCTCGGCAAGACGGGGCGCGCGGTCGGCGCGTGGGTCGTGCTGAGCGTGCTGTGCGAGCCGCTCCTGA
GCGTGTGGGCGACGATGCGCGAGCCCGTCGGGCATCGCGTCGTCACGCTGAGCTTCGATCTGCCGTATGTCGTCGCGCTG
TTTGCCGCGGCGTGCATCACGGTCATCGCGCACATCCTGCGGCAGGCGAGCGAACTCGACGCCGAGCACCGGCAGTTCGT
CTGA

Upstream 100 bases:

>100_bases
TTCGACAAATAATCAAATTTTTACAATCAAAAATGATTGTTTTGCGATAATTTTCTGCGTACAATCCGCCCCGTGATCAT
TCCCCCGTCGAGGACCTCCC

Downstream 100 bases:

>100_bases
GGCGCGCGCCATGCCGATCATCGTCAAGCTCGACGTGATGCTCGCGATCCGCAAGGTCCGCTCGAAGGATCTCGCGGCGG
CCGTCGGCATCACCGAGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MHSDRIARLSQRMAAATLCFIVAMMLLNAACWAFPSLNSVKSGAGLGFGLTDSLIGSLKVDVAAFPWWQKAGGIVLSSVP
LVALASGLRHLRALFRTYARRDYFSAQAARHLGKTGRAVGAWVVLSVLCEPLLSVWATMREPVGHRVVTLSFDLPYVVAL
FAAACITVIAHILRQASELDAEHRQFV

Sequences:

>Translated_187_residues
MHSDRIARLSQRMAAATLCFIVAMMLLNAACWAFPSLNSVKSGAGLGFGLTDSLIGSLKVDVAAFPWWQKAGGIVLSSVP
LVALASGLRHLRALFRTYARRDYFSAQAARHLGKTGRAVGAWVVLSVLCEPLLSVWATMREPVGHRVVTLSFDLPYVVAL
FAAACITVIAHILRQASELDAEHRQFV
>Mature_187_residues
MHSDRIARLSQRMAAATLCFIVAMMLLNAACWAFPSLNSVKSGAGLGFGLTDSLIGSLKVDVAAFPWWQKAGGIVLSSVP
LVALASGLRHLRALFRTYARRDYFSAQAARHLGKTGRAVGAWVVLSVLCEPLLSVWATMREPVGHRVVTLSFDLPYVVAL
FAAACITVIAHILRQASELDAEHRQFV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20277; Mature: 20277

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSDRIARLSQRMAAATLCFIVAMMLLNAACWAFPSLNSVKSGAGLGFGLTDSLIGSLKV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHH
DVAAFPWWQKAGGIVLSSVPLVALASGLRHLRALFRTYARRDYFSAQAARHLGKTGRAVG
HHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
AWVVLSVLCEPLLSVWATMREPVGHRVVTLSFDLPYVVALFAAACITVIAHILRQASELD
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCC
AEHRQFV
HHHHCCC
>Mature Secondary Structure
MHSDRIARLSQRMAAATLCFIVAMMLLNAACWAFPSLNSVKSGAGLGFGLTDSLIGSLKV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHH
DVAAFPWWQKAGGIVLSSVPLVALASGLRHLRALFRTYARRDYFSAQAARHLGKTGRAVG
HHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
AWVVLSVLCEPLLSVWATMREPVGHRVVTLSFDLPYVVALFAAACITVIAHILRQASELD
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCC
AEHRQFV
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA