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The map label for this gene is rmuC [H]

Identifier: 126455148

GI number: 126455148

Start: 2823172

End: 2824647

Strand: Reverse

Name: rmuC [H]

Synonym: BURPS1106A_2869

Alternate gene names: 126455148

Gene position: 2824647-2823172 (Counterclockwise)

Preceding gene: 126454705

Following gene: 126452060

Centisome position: 70.82

GC content: 69.58

Gene sequence:

>1476_bases
ATGACCGAAACCTTGTTGCTGGCCGCGATCGTCGCGCTCGCGGTGGCGCTCGTCGTCGCGCTCGTCATGCTGTTGCGCGG
CGGCCCGCGCGGCGGTGGCCTCGAGCGGCTCGCCGAGCAGATCGACGACGCGAACGACGCGCACGCGCATGCGGCCGAGC
GCCTCGAGCGCGAGCTGCGCGCGGAGATCGTCGACGGCGCGCGCCATTCGCGCACCGAGCTCGCGGGCAACTTCGCGCAA
TTGCAGCAGACGCTTGCCGCACAGCTCACGAGCGTCGCGACGGTGCAGAACAATCAGATCGACGGCTTCGCGCAGCAGCT
CGCGAAGCTCGTCGCGGGCAACACGCAGCAGTTCGACGCGATGCGCGACACGCTGCAGCGGCAGGCGCAGCTCGCGCGCG
AAGAGCAGGGCACGGCGCTCCGGCATTTCGGCGATACGCTCAACCAGCAGCTCACGCAACTGACGCAGGCGAACGATCGC
CGGATCGGCGAGGTGCGCGCGACGCTCGAGACGCGCCTGAAGGAAATCGAGGCGAACAATGCGGCGAAGCTCGAAGAGAT
GCGCCGCACCGTCGACGAGAAGCTGCACGCGACGCTCGAGCAGCGCCTCGGCGAATCGTTCAAGCTCGTGTCGGACCGGC
TCGAGCAGGTGCACCGCGGGCTCGGCGAGATGCAGACGCTCGCGGCGGGCGTCGGCGACCTGAAGAAGGTGCTGACGAAC
GTGAAGACGCGCGGCACCTGGGGTGAGGTGCAGCTCGAGGCGCTGCTCGAGCAGATGCTGACGCCGGATCAATACGCGAA
GAACGTCGCGACGGTGCCGAAGAGCGGCGAGCGCGTCGAGTTCGCGATCCGGCTGCCGGGGCGGCACGACGAAGGCGCGG
CGGGCGGCGCGGAACCGGTGTGGTTGCCGATCGACGCGAAATTCCCGCGTGAAGACTACGAACGCCTGATCGACGCGCAG
GAACGCGCGGACGCGGCGGCTGTCGAGGAGGCCGCGCGCGCGCTCGAGGCGCGGATTCGCGCGGAGGCGCGCACGATCGC
CGAAAAGTACGTCGCGCCGCCGCACACGACCGATTTTGCGCTGCTGTTCTTGCCGACCGAAGGGCTCTACGCGGAGATCC
TGCGCCGCCCCGGCCTGACCGATCTGCTGCAGCGCGACTATCGCGTGACGGTGGCCGGCCCGACGACGCTGACGGCGCTG
CTGAACAGTCTGCAGATGGGGTTCCGCACGCTCGCGATCGAGAAGCGCTCGAGCGAGGTCTGGCAGGTGCTCGGCGCGGT
GAAGACCGAATTCGGCAAGTTCGGCGACGTGCTCGCGCGCACGAAATCGCAGCTCGAGACGGTCACGCGCTCGATCGAGG
CGGCCGAACAGCGCACGCGCGTGATGAACCGCAAGCTCAAGCAGGTCGAGGCGCTGCCGGGCGAGGCCGCGAACGGCCTG
CTCGGCGTGGACGGGGCCGAGGCCGACGAGAGCTGA

Upstream 100 bases:

>100_bases
ATCTCGCGGCGGACAACCTGATCGCGGCGCTCGGCGCGGGCCCGCGCGCGGGCCGCCCGCCGAATCCGATCAATCCCGGC
GTGCTGGGGAAGGCTCGCAT

Downstream 100 bases:

>100_bases
CGGCGGCGTGCGTCGCGCGTTGCGTCGGCAGGGGCTTCGCGCGCATCGTGCGTGCAAAATGAAAACGGGGCGCCGCATGC
GCCCCGTCTGCTTGGCCGCT

Product: putative DNA recombination protein RmuC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 491; Mature: 490

Protein sequence:

>491_residues
MTETLLLAAIVALAVALVVALVMLLRGGPRGGGLERLAEQIDDANDAHAHAAERLERELRAEIVDGARHSRTELAGNFAQ
LQQTLAAQLTSVATVQNNQIDGFAQQLAKLVAGNTQQFDAMRDTLQRQAQLAREEQGTALRHFGDTLNQQLTQLTQANDR
RIGEVRATLETRLKEIEANNAAKLEEMRRTVDEKLHATLEQRLGESFKLVSDRLEQVHRGLGEMQTLAAGVGDLKKVLTN
VKTRGTWGEVQLEALLEQMLTPDQYAKNVATVPKSGERVEFAIRLPGRHDEGAAGGAEPVWLPIDAKFPREDYERLIDAQ
ERADAAAVEEAARALEARIRAEARTIAEKYVAPPHTTDFALLFLPTEGLYAEILRRPGLTDLLQRDYRVTVAGPTTLTAL
LNSLQMGFRTLAIEKRSSEVWQVLGAVKTEFGKFGDVLARTKSQLETVTRSIEAAEQRTRVMNRKLKQVEALPGEAANGL
LGVDGAEADES

Sequences:

>Translated_491_residues
MTETLLLAAIVALAVALVVALVMLLRGGPRGGGLERLAEQIDDANDAHAHAAERLERELRAEIVDGARHSRTELAGNFAQ
LQQTLAAQLTSVATVQNNQIDGFAQQLAKLVAGNTQQFDAMRDTLQRQAQLAREEQGTALRHFGDTLNQQLTQLTQANDR
RIGEVRATLETRLKEIEANNAAKLEEMRRTVDEKLHATLEQRLGESFKLVSDRLEQVHRGLGEMQTLAAGVGDLKKVLTN
VKTRGTWGEVQLEALLEQMLTPDQYAKNVATVPKSGERVEFAIRLPGRHDEGAAGGAEPVWLPIDAKFPREDYERLIDAQ
ERADAAAVEEAARALEARIRAEARTIAEKYVAPPHTTDFALLFLPTEGLYAEILRRPGLTDLLQRDYRVTVAGPTTLTAL
LNSLQMGFRTLAIEKRSSEVWQVLGAVKTEFGKFGDVLARTKSQLETVTRSIEAAEQRTRVMNRKLKQVEALPGEAANGL
LGVDGAEADES
>Mature_490_residues
TETLLLAAIVALAVALVVALVMLLRGGPRGGGLERLAEQIDDANDAHAHAAERLERELRAEIVDGARHSRTELAGNFAQL
QQTLAAQLTSVATVQNNQIDGFAQQLAKLVAGNTQQFDAMRDTLQRQAQLAREEQGTALRHFGDTLNQQLTQLTQANDRR
IGEVRATLETRLKEIEANNAAKLEEMRRTVDEKLHATLEQRLGESFKLVSDRLEQVHRGLGEMQTLAAGVGDLKKVLTNV
KTRGTWGEVQLEALLEQMLTPDQYAKNVATVPKSGERVEFAIRLPGRHDEGAAGGAEPVWLPIDAKFPREDYERLIDAQE
RADAAAVEEAARALEARIRAEARTIAEKYVAPPHTTDFALLFLPTEGLYAEILRRPGLTDLLQRDYRVTVAGPTTLTALL
NSLQMGFRTLAIEKRSSEVWQVLGAVKTEFGKFGDVLARTKSQLETVTRSIEAAEQRTRVMNRKLKQVEALPGEAANGLL
GVDGAEADES

Specific function: Involved in DNA recombination [H]

COG id: COG1322

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rmuC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003798 [H]

Pfam domain/function: PF02646 RmuC [H]

EC number: NA

Molecular weight: Translated: 53947; Mature: 53816

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETLLLAAIVALAVALVVALVMLLRGGPRGGGLERLAEQIDDANDAHAHAAERLERELR
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHH
AEIVDGARHSRTELAGNFAQLQQTLAAQLTSVATVQNNQIDGFAQQLAKLVAGNTQQFDA
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHH
MRDTLQRQAQLAREEQGTALRHFGDTLNQQLTQLTQANDRRIGEVRATLETRLKEIEANN
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
AAKLEEMRRTVDEKLHATLEQRLGESFKLVSDRLEQVHRGLGEMQTLAAGVGDLKKVLTN
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKTRGTWGEVQLEALLEQMLTPDQYAKNVATVPKSGERVEFAIRLPGRHDEGAAGGAEPV
HHCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCE
WLPIDAKFPREDYERLIDAQERADAAAVEEAARALEARIRAEARTIAEKYVAPPHTTDFA
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
LLFLPTEGLYAEILRRPGLTDLLQRDYRVTVAGPTTLTALLNSLQMGFRTLAIEKRSSEV
EEEECCCHHHHHHHHCCCHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH
WQVLGAVKTEFGKFGDVLARTKSQLETVTRSIEAAEQRTRVMNRKLKQVEALPGEAANGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
LGVDGAEADES
EECCCCCCCCC
>Mature Secondary Structure 
TETLLLAAIVALAVALVVALVMLLRGGPRGGGLERLAEQIDDANDAHAHAAERLERELR
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHH
AEIVDGARHSRTELAGNFAQLQQTLAAQLTSVATVQNNQIDGFAQQLAKLVAGNTQQFDA
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHH
MRDTLQRQAQLAREEQGTALRHFGDTLNQQLTQLTQANDRRIGEVRATLETRLKEIEANN
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
AAKLEEMRRTVDEKLHATLEQRLGESFKLVSDRLEQVHRGLGEMQTLAAGVGDLKKVLTN
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKTRGTWGEVQLEALLEQMLTPDQYAKNVATVPKSGERVEFAIRLPGRHDEGAAGGAEPV
HHCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCE
WLPIDAKFPREDYERLIDAQERADAAAVEEAARALEARIRAEARTIAEKYVAPPHTTDFA
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
LLFLPTEGLYAEILRRPGLTDLLQRDYRVTVAGPTTLTALLNSLQMGFRTLAIEKRSSEV
EEEECCCHHHHHHHHCCCHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH
WQVLGAVKTEFGKFGDVLARTKSQLETVTRSIEAAEQRTRVMNRKLKQVEALPGEAANGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
LGVDGAEADES
EECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]