| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
Click here to switch to the map view.
The map label for this gene is 126455087
Identifier: 126455087
GI number: 126455087
Start: 663861
End: 664508
Strand: Direct
Name: 126455087
Synonym: BURPS1106A_0690
Alternate gene names: NA
Gene position: 663861-664508 (Clockwise)
Preceding gene: 126454052
Following gene: 126452649
Centisome position: 16.64
GC content: 65.43
Gene sequence:
>648_bases ATGAAAAAGACGACCCTCAAATCGGTGTTTCTGACCGGACTCCTGGTTCTCGTTCCGCTCGCGATCACGCTGTGGGTGCT CGGGCTCATCATCGGCACGATGGATCAGACGCTGCTCCTGCTGCCCGCGTCGTGGCAGCCGGAGCGGCTGTTCGGCTTTC GGCTGCCGGGGATCGGCGCGGTGCTCACGCTCGCGTTCATCTTCGTCGTCGGGCTCGCGACGCAGAATTTCATCGGCCAG AAGCTCGTCACCTGGTGGAACGCGGTCGTGCGGCATATTCCCGTCGTGGGGCCGATCTACACGAGCGTGAAGCAGGTGTC GGACACGCTGCTGTCGAGCAGCGGCAACGCATTCCGCAAGGCGCTCCTGATCGAGTATCCGCGCCGCGGCTCCTATACGA TCGCGTTCCTGACCGGCACGCCCGGCGGCGACGTGGTCAATCACCTGAAGGAAGAGCACGTGAGCGTCTACGTGCCGACG ACGCCGAATCCGACGTCCGGCTTCTTCCTGATGGTGCCGAAAAGCGAGGTCGTCGAGCTCGACATGTCGGTCGACGCCGC GCTCAAGTACATCGTCTCGATGGGCGTCGTCGCGCCCCCGGCGCCCGTTGCCGCGCCGGCGCGCCGCCCCGTCGAGCCGC CGATGTAA
Upstream 100 bases:
>100_bases CCCGCCGCCGCGCCCGCGAGCAGCACTTGATCGCCGCGCCGCCCGTGTCGGCGGCGCGCCCCGCGCTTGACGCACCGGCG CGATTTTTCGACGGCAGATG
Downstream 100 bases:
>100_bases TGCCCGGGAGAGAGTGCGGCTCTTCCCGTTGACCACTACGAAAGAAAGCAAACATCATGTCGATGCGAACTGAATACTGC GGTCTCGTGACCGAACACCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MKKTTLKSVFLTGLLVLVPLAITLWVLGLIIGTMDQTLLLLPASWQPERLFGFRLPGIGAVLTLAFIFVVGLATQNFIGQ KLVTWWNAVVRHIPVVGPIYTSVKQVSDTLLSSSGNAFRKALLIEYPRRGSYTIAFLTGTPGGDVVNHLKEEHVSVYVPT TPNPTSGFFLMVPKSEVVELDMSVDAALKYIVSMGVVAPPAPVAAPARRPVEPPM
Sequences:
>Translated_215_residues MKKTTLKSVFLTGLLVLVPLAITLWVLGLIIGTMDQTLLLLPASWQPERLFGFRLPGIGAVLTLAFIFVVGLATQNFIGQ KLVTWWNAVVRHIPVVGPIYTSVKQVSDTLLSSSGNAFRKALLIEYPRRGSYTIAFLTGTPGGDVVNHLKEEHVSVYVPT TPNPTSGFFLMVPKSEVVELDMSVDAALKYIVSMGVVAPPAPVAAPARRPVEPPM >Mature_215_residues MKKTTLKSVFLTGLLVLVPLAITLWVLGLIIGTMDQTLLLLPASWQPERLFGFRLPGIGAVLTLAFIFVVGLATQNFIGQ KLVTWWNAVVRHIPVVGPIYTSVKQVSDTLLSSSGNAFRKALLIEYPRRGSYTIAFLTGTPGGDVVNHLKEEHVSVYVPT TPNPTSGFFLMVPKSEVVELDMSVDAALKYIVSMGVVAPPAPVAAPARRPVEPPM
Specific function: Unknown
COG id: COG2928
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23278; Mature: 23278
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTTLKSVFLTGLLVLVPLAITLWVLGLIIGTMDQTLLLLPASWQPERLFGFRLPGIGA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHEEECCCCHHH VLTLAFIFVVGLATQNFIGQKLVTWWNAVVRHIPVVGPIYTSVKQVSDTLLSSSGNAFRK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHH ALLIEYPRRGSYTIAFLTGTPGGDVVNHLKEEHVSVYVPTTPNPTSGFFLMVPKSEVVEL HHHHCCCCCCCEEEEEEECCCCHHHHHHHHHCCEEEEECCCCCCCCCEEEEECCHHEEEE DMSVDAALKYIVSMGVVAPPAPVAAPARRPVEPPM CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKKTTLKSVFLTGLLVLVPLAITLWVLGLIIGTMDQTLLLLPASWQPERLFGFRLPGIGA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHEEECCCCHHH VLTLAFIFVVGLATQNFIGQKLVTWWNAVVRHIPVVGPIYTSVKQVSDTLLSSSGNAFRK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHH ALLIEYPRRGSYTIAFLTGTPGGDVVNHLKEEHVSVYVPTTPNPTSGFFLMVPKSEVVEL HHHHCCCCCCCEEEEEEECCCCHHHHHHHHHCCEEEEECCCCCCCCCEEEEECCHHEEEE DMSVDAALKYIVSMGVVAPPAPVAAPARRPVEPPM CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA