| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126455049
Identifier: 126455049
GI number: 126455049
Start: 1702367
End: 1704520
Strand: Reverse
Name: 126455049
Synonym: BURPS1106A_1743
Alternate gene names: NA
Gene position: 1704520-1702367 (Counterclockwise)
Preceding gene: 126454741
Following gene: 126452915
Centisome position: 42.74
GC content: 66.2
Gene sequence:
>2154_bases GTGCATACGGCCGTTTCGGCTTCACGCTGGTTCTTGCGCTCGTGCGCCGGAACCGCTGTCACGCTCGCCGTTCTGAGTGC GGGATGCGCGGAATCGACGCCCAAATCCGGCAACGGCGGCGCCGCGTCGACGGCGATCGAGCGCACGAAAGCCGATCGTC TCGCGCGCGAACAGCAGACCGCGCGGACCGTGCCGACGCTCGCGTCGATCAAGATCGACCAGCCGCGCCCGCTCACGCTG CGCGATTCAGGCCAAAGCGGCACGCTCGCGTTCCTGCGCGAAGTCGATTTCCGCATCGTCGGCGATCTCGGCTTCCTCGT TCACGAGCTGTCGGCGACGCTCGTGCCGACGCATCCCGGCGCCCCCACCGTGTTCGATGATCCGACGAGCTTCGACATCG CCGTGCACCGCGGCACCGTGACGCTCGACAACACCAAACTCAATGCGCTGTTCGGCGGCTACATCTTCGGCTATCGCAAC GCGCCGTTGCGCAACGTGCGCGTGAGCGCGGGCGACGGCTTCCTCGACATCCGCGGCGAAATGCAGCGCGACGGCTGGGT GCCGTTCGCGCTCAAAGGCAAGCTGGAGATCCGCGACGGCTCGACGCTCGTGTTCCACCCGACCGACGTGCACGTATCGG GCATCGAAGCGGGCCCCGTGATGCGCGCGGCGAAAGTGCAGGTGTCGGATCTGCTGAAGATCGATACGCCGATCGTGCGG CTGAACGGCAACGATCTCGTGCTCAACGTCGACAAGCTGCTGCCGCCGCCCCATCTGAAGATCAATATCGTCTCGCTGAA ACTGACTTCCGCCGGCCTCGATCTCGTGCTCGACGACGGCACGAAGGCGGGCTTCACGATGCCGGAGAACGCGCCGAAGC ATGCAATGTATCTGCGCGGCGGCGACGTGAAATTCATGCGCACGATGCCGATGAACGCGGACATCGTGATCTACCCGCCG CGCGAATCGTCGCCCGACGACGCATTCGTATTCGACATGTATCACTATCGCGATCAACTCGTCGCCGGCTATTTCAACTT CGAGCCGAGCGGCGCGCTGTCGATTCTGATGCCGTCGTATCGGCGGCTCGCGCGCCCGAGCGCGCCGAGCCTCGGCAGCG CGGCCGCGCGGATGAACGACAGCCTGATCGACGCGCAGCAGTTAAGCCTCGGCGAAGCGCGCCGCCAATGGGAGGCGTTC GCGATCACGCCGAACGGCGGCGCGGCGCAGCCGAACTTCCGCAAGGTGGCCGCCAAGCACGGCGGCGATGTATCGATGTT CGGCCCGCGCCATATTTCGAACGGCACGACGACGATCCACCTGCACAACGCGGACTTCTACATTGCGGGCAATATCGGCT TTCGCGTCGAGGATCTCGTCGTCCAGCTCGTGTCGAAGCGCGCGGGCGAGCCCGTCGATCTCGACGATCCGAACCAGTAC GACATCCGCATTCTGAGCGGCTCGGTGCTCGCGCCGTGGGATGCGATGTCCGACCTCTTCAACCGCCACCTGCTCGACTA TTCGCCGCGCTCGCTGAACGACCTGAAACTGAGCGCCGACGGCGGCGCGCTGCGCGTGCGGGGCGGCATCAAGCTGTGGA ATCAGGTGCCGCCCGGCGTCTGGCTGCCGGCCGACATGAAGGGTTCGCTCACGCTGCTGGACGAACGCCATCTCGCGTTC ACGCCGACGCAGGTATCGGTGCTCGGCATACCGCAGGCGAAGCTGCTGCGCGCACTCGGCATCGAGCTGTCGTCGCTCGC GCCGCTCAAGCGCCGCGGCGCCGAGCTGCGCGGCGATTCGCTCGTGCTCGACCAGTACACCGTGTTCCCGCCGCCCGTGC TGATCGGCCACATGTCGCAGGCGACAGTCGAGCCGGACGGTCTGCGCCTCACGTTCCGCCCCGCGCCGAACGCACCGGTG CTGCGGCCGCCGGCGAACCTTCCCGGCAGCTACCTGTGGCTCGAAGGCGGCGACACGAAGATGTTCAACGTCCTCGTGCT GAACATGCGCATTCTCGTCGAGGACACGGCCAAGCCACGGGTGCGCTTCGATCTCTACGATTACCGTGACGTGGTCTCGC GCGGCTCGGTGCGGATGGTGCACGATGGGACGCTGTACGTCGACGTCGGCAAGAAGGATCCGCTCGCCCGATGA
Upstream 100 bases:
>100_bases CGCCAGTCACGACAAAGATAGGGAGACATCGAAGATGTGGACACCGGTCCAGCGCGTTCAACGCAGGCCTTCTCGCCGCG CGCCCGGCGCATGGCGCGCC
Downstream 100 bases:
>100_bases CCCGCGCCGCACCGCCGCGCGGAGGGAACCGCTCGAAAAAAAGCCCGCGCGAACGGTAGTTCGCACGGGCTCGTCTTCGA TGTTCCGCCGCCGCCCGCCT
Product: putative lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 717; Mature: 717
Protein sequence:
>717_residues MHTAVSASRWFLRSCAGTAVTLAVLSAGCAESTPKSGNGGAASTAIERTKADRLAREQQTARTVPTLASIKIDQPRPLTL RDSGQSGTLAFLREVDFRIVGDLGFLVHELSATLVPTHPGAPTVFDDPTSFDIAVHRGTVTLDNTKLNALFGGYIFGYRN APLRNVRVSAGDGFLDIRGEMQRDGWVPFALKGKLEIRDGSTLVFHPTDVHVSGIEAGPVMRAAKVQVSDLLKIDTPIVR LNGNDLVLNVDKLLPPPHLKINIVSLKLTSAGLDLVLDDGTKAGFTMPENAPKHAMYLRGGDVKFMRTMPMNADIVIYPP RESSPDDAFVFDMYHYRDQLVAGYFNFEPSGALSILMPSYRRLARPSAPSLGSAAARMNDSLIDAQQLSLGEARRQWEAF AITPNGGAAQPNFRKVAAKHGGDVSMFGPRHISNGTTTIHLHNADFYIAGNIGFRVEDLVVQLVSKRAGEPVDLDDPNQY DIRILSGSVLAPWDAMSDLFNRHLLDYSPRSLNDLKLSADGGALRVRGGIKLWNQVPPGVWLPADMKGSLTLLDERHLAF TPTQVSVLGIPQAKLLRALGIELSSLAPLKRRGAELRGDSLVLDQYTVFPPPVLIGHMSQATVEPDGLRLTFRPAPNAPV LRPPANLPGSYLWLEGGDTKMFNVLVLNMRILVEDTAKPRVRFDLYDYRDVVSRGSVRMVHDGTLYVDVGKKDPLAR
Sequences:
>Translated_717_residues MHTAVSASRWFLRSCAGTAVTLAVLSAGCAESTPKSGNGGAASTAIERTKADRLAREQQTARTVPTLASIKIDQPRPLTL RDSGQSGTLAFLREVDFRIVGDLGFLVHELSATLVPTHPGAPTVFDDPTSFDIAVHRGTVTLDNTKLNALFGGYIFGYRN APLRNVRVSAGDGFLDIRGEMQRDGWVPFALKGKLEIRDGSTLVFHPTDVHVSGIEAGPVMRAAKVQVSDLLKIDTPIVR LNGNDLVLNVDKLLPPPHLKINIVSLKLTSAGLDLVLDDGTKAGFTMPENAPKHAMYLRGGDVKFMRTMPMNADIVIYPP RESSPDDAFVFDMYHYRDQLVAGYFNFEPSGALSILMPSYRRLARPSAPSLGSAAARMNDSLIDAQQLSLGEARRQWEAF AITPNGGAAQPNFRKVAAKHGGDVSMFGPRHISNGTTTIHLHNADFYIAGNIGFRVEDLVVQLVSKRAGEPVDLDDPNQY DIRILSGSVLAPWDAMSDLFNRHLLDYSPRSLNDLKLSADGGALRVRGGIKLWNQVPPGVWLPADMKGSLTLLDERHLAF TPTQVSVLGIPQAKLLRALGIELSSLAPLKRRGAELRGDSLVLDQYTVFPPPVLIGHMSQATVEPDGLRLTFRPAPNAPV LRPPANLPGSYLWLEGGDTKMFNVLVLNMRILVEDTAKPRVRFDLYDYRDVVSRGSVRMVHDGTLYVDVGKKDPLAR >Mature_717_residues MHTAVSASRWFLRSCAGTAVTLAVLSAGCAESTPKSGNGGAASTAIERTKADRLAREQQTARTVPTLASIKIDQPRPLTL RDSGQSGTLAFLREVDFRIVGDLGFLVHELSATLVPTHPGAPTVFDDPTSFDIAVHRGTVTLDNTKLNALFGGYIFGYRN APLRNVRVSAGDGFLDIRGEMQRDGWVPFALKGKLEIRDGSTLVFHPTDVHVSGIEAGPVMRAAKVQVSDLLKIDTPIVR LNGNDLVLNVDKLLPPPHLKINIVSLKLTSAGLDLVLDDGTKAGFTMPENAPKHAMYLRGGDVKFMRTMPMNADIVIYPP RESSPDDAFVFDMYHYRDQLVAGYFNFEPSGALSILMPSYRRLARPSAPSLGSAAARMNDSLIDAQQLSLGEARRQWEAF AITPNGGAAQPNFRKVAAKHGGDVSMFGPRHISNGTTTIHLHNADFYIAGNIGFRVEDLVVQLVSKRAGEPVDLDDPNQY DIRILSGSVLAPWDAMSDLFNRHLLDYSPRSLNDLKLSADGGALRVRGGIKLWNQVPPGVWLPADMKGSLTLLDERHLAF TPTQVSVLGIPQAKLLRALGIELSSLAPLKRRGAELRGDSLVLDQYTVFPPPVLIGHMSQATVEPDGLRLTFRPAPNAPV LRPPANLPGSYLWLEGGDTKMFNVLVLNMRILVEDTAKPRVRFDLYDYRDVVSRGSVRMVHDGTLYVDVGKKDPLAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 78158; Mature: 78158
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTAVSASRWFLRSCAGTAVTLAVLSAGCAESTPKSGNGGAASTAIERTKADRLAREQQT CCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH ARTVPTLASIKIDQPRPLTLRDSGQSGTLAFLREVDFRIVGDLGFLVHELSATLVPTHPG HHCCCCEEEEEECCCCCEEEECCCCCCCEEEEECCCEEEEEHHHHHHHHHHCEEEECCCC APTVFDDPTSFDIAVHRGTVTLDNTKLNALFGGYIFGYRNAPLRNVRVSAGDGFLDIRGE CCCCCCCCCCEEEEEEECEEEECCCEEEEEECEEEEEECCCCCCEEEEECCCCEEEECCC MQRDGWVPFALKGKLEIRDGSTLVFHPTDVHVSGIEAGPVMRAAKVQVSDLLKIDTPIVR CCCCCCCEEEEEEEEEEECCCEEEEECCCEEEECCCCCCCEEEEHEEHHHHHCCCCCEEE LNGNDLVLNVDKLLPPPHLKINIVSLKLTSAGLDLVLDDGTKAGFTMPENAPKHAMYLRG ECCCEEEEEHHHCCCCCCEEEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCEEEEEC GDVKFMRTMPMNADIVIYPPRESSPDDAFVFDMYHYRDQLVAGYFNFEPSGALSILMPSY CCEEEEEECCCCCCEEEECCCCCCCCCEEEEEHHHHHCCEEEEEECCCCCCCEEEECHHH RRLARPSAPSLGSAAARMNDSLIDAQQLSLGEARRQWEAFAITPNGGAAQPNFRKVAAKH HHHCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHC GGDVSMFGPRHISNGTTTIHLHNADFYIAGNIGFRVEDLVVQLVSKRAGEPVDLDDPNQY CCCEEEECCEEECCCEEEEEEECCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCE DIRILSGSVLAPWDAMSDLFNRHLLDYSPRSLNDLKLSADGGALRVRGGIKLWNQVPPGV EEEEEECCEECCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCEEEHHCCCCCE WLPADMKGSLTLLDERHLAFTPTQVSVLGIPQAKLLRALGIELSSLAPLKRRGAELRGDS EECCCCCCCEEEEECCCEEECCCEEEEEECCHHHHHHHHCCCHHHCCCHHHCCCCCCCCE LVLDQYTVFPPPVLIGHMSQATVEPDGLRLTFRPAPNAPVLRPPANLPGSYLWLEGGDTK EEEECEECCCCCCEEECCCCCEECCCCEEEEEECCCCCCEECCCCCCCCCEEEEECCCCE MFNVLVLNMRILVEDTAKPRVRFDLYDYRDVVSRGSVRMVHDGTLYVDVGKKDPLAR EEEEEEEEEEEEEECCCCCEEEEEEHHHHHHHCCCCEEEEECCEEEEECCCCCCCCC >Mature Secondary Structure MHTAVSASRWFLRSCAGTAVTLAVLSAGCAESTPKSGNGGAASTAIERTKADRLAREQQT CCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH ARTVPTLASIKIDQPRPLTLRDSGQSGTLAFLREVDFRIVGDLGFLVHELSATLVPTHPG HHCCCCEEEEEECCCCCEEEECCCCCCCEEEEECCCEEEEEHHHHHHHHHHCEEEECCCC APTVFDDPTSFDIAVHRGTVTLDNTKLNALFGGYIFGYRNAPLRNVRVSAGDGFLDIRGE CCCCCCCCCCEEEEEEECEEEECCCEEEEEECEEEEEECCCCCCEEEEECCCCEEEECCC MQRDGWVPFALKGKLEIRDGSTLVFHPTDVHVSGIEAGPVMRAAKVQVSDLLKIDTPIVR CCCCCCCEEEEEEEEEEECCCEEEEECCCEEEECCCCCCCEEEEHEEHHHHHCCCCCEEE LNGNDLVLNVDKLLPPPHLKINIVSLKLTSAGLDLVLDDGTKAGFTMPENAPKHAMYLRG ECCCEEEEEHHHCCCCCCEEEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCEEEEEC GDVKFMRTMPMNADIVIYPPRESSPDDAFVFDMYHYRDQLVAGYFNFEPSGALSILMPSY CCEEEEEECCCCCCEEEECCCCCCCCCEEEEEHHHHHCCEEEEEECCCCCCCEEEECHHH RRLARPSAPSLGSAAARMNDSLIDAQQLSLGEARRQWEAFAITPNGGAAQPNFRKVAAKH HHHCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHC GGDVSMFGPRHISNGTTTIHLHNADFYIAGNIGFRVEDLVVQLVSKRAGEPVDLDDPNQY CCCEEEECCEEECCCEEEEEEECCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCE DIRILSGSVLAPWDAMSDLFNRHLLDYSPRSLNDLKLSADGGALRVRGGIKLWNQVPPGV EEEEEECCEECCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCEEEHHCCCCCE WLPADMKGSLTLLDERHLAFTPTQVSVLGIPQAKLLRALGIELSSLAPLKRRGAELRGDS EECCCCCCCEEEEECCCEEECCCEEEEEECCHHHHHHHHCCCHHHCCCHHHCCCCCCCCE LVLDQYTVFPPPVLIGHMSQATVEPDGLRLTFRPAPNAPVLRPPANLPGSYLWLEGGDTK EEEECEECCCCCCEEECCCCCEECCCCEEEEEECCCCCCEECCCCCCCCCEEEEECCCCE MFNVLVLNMRILVEDTAKPRVRFDLYDYRDVVSRGSVRMVHDGTLYVDVGKKDPLAR EEEEEEEEEEEEEECCCCCEEEEEEHHHHHHHCCCCEEEEECCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA