| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
Click here to switch to the map view.
The map label for this gene is 126452915
Identifier: 126452915
GI number: 126452915
Start: 1687312
End: 1687869
Strand: Reverse
Name: 126452915
Synonym: BURPS1106A_1729
Alternate gene names: NA
Gene position: 1687869-1687312 (Counterclockwise)
Preceding gene: 126455049
Following gene: 126451454
Centisome position: 42.32
GC content: 73.3
Gene sequence:
>558_bases ATGCCCGCCCTCTTTCGCCGACGCCCGCTTGCCGCGATCCGCGCCGCGGCGGCGCTGTCGCTCGCGGCGACACTCGCGCC CGCGCACGCCGATACGACCGGCCTGATCGAGCCCGCGCACCTGAGCGTCGACGGCAGCCTGCCCGCGGCGCAGCGCGACG CGCAGATCCTCGCCGCGCGCCGCTACGACACGTTCTGGCACAACGGCGATCCGGCGCTTGCGCGCGCCGCGCTCGCCGAC GATTTCGCCGACCGCACGCCGCCGCCCGGCCGCGCGCCCGGCCTGGCCGGCCCGCTCGCCGCGTCGCGGACGATGCGCGC GGCGATCCCCGATCTGTCGTGCGAGATCGAGCAGATGATCGTCGCGGGCGAGCGCGTCGTCGTGCATCTGCGCTTTCGCG GGCACTTCACCGGCAGGTTCGGGCCCGTGCAAGGCAAAGGCCAGGCGATCGACTTCATCGCGACCGACATCTATCGCATC GAGCGCGGCCGGATCGCCGAGAACTGGCACATCGAAGACAACCTGACGCTGCTGCGCGAGCTCGGCATCGCCGCCTGA
Upstream 100 bases:
>100_bases AACTAACATGAATGCCGCCGCCGTACGAACGAGGCGGACGACATTCCGCGCGATCGCCGTCAGGCATCGCGCGCCACGCA ACGCACACAAGGAGATTCCG
Downstream 100 bases:
>100_bases CGAAGGGAACGCGCATGACGACCAACATGTCCGACGCGGCCGGCGCACCGGCCACTTCATTCGCGCCCGAGCGGCGCGCG TTCCTGGCCCGTGCGGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MPALFRRRPLAAIRAAAALSLAATLAPAHADTTGLIEPAHLSVDGSLPAAQRDAQILAARRYDTFWHNGDPALARAALAD DFADRTPPPGRAPGLAGPLAASRTMRAAIPDLSCEIEQMIVAGERVVVHLRFRGHFTGRFGPVQGKGQAIDFIATDIYRI ERGRIAENWHIEDNLTLLRELGIAA
Sequences:
>Translated_185_residues MPALFRRRPLAAIRAAAALSLAATLAPAHADTTGLIEPAHLSVDGSLPAAQRDAQILAARRYDTFWHNGDPALARAALAD DFADRTPPPGRAPGLAGPLAASRTMRAAIPDLSCEIEQMIVAGERVVVHLRFRGHFTGRFGPVQGKGQAIDFIATDIYRI ERGRIAENWHIEDNLTLLRELGIAA >Mature_184_residues PALFRRRPLAAIRAAAALSLAATLAPAHADTTGLIEPAHLSVDGSLPAAQRDAQILAARRYDTFWHNGDPALARAALADD FADRTPPPGRAPGLAGPLAASRTMRAAIPDLSCEIEQMIVAGERVVVHLRFRGHFTGRFGPVQGKGQAIDFIATDIYRIE RGRIAENWHIEDNLTLLRELGIAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19897; Mature: 19766
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPALFRRRPLAAIRAAAALSLAATLAPAHADTTGLIEPAHLSVDGSLPAAQRDAQILAAR CCCCHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHH RYDTFWHNGDPALARAALADDFADRTPPPGRAPGLAGPLAASRTMRAAIPDLSCEIEQMI HCCCCEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHH VAGERVVVHLRFRGHFTGRFGPVQGKGQAIDFIATDIYRIERGRIAENWHIEDNLTLLRE HCCCEEEEEEEECCEECCCCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCEECCCHHHHHH LGIAA CCCCC >Mature Secondary Structure PALFRRRPLAAIRAAAALSLAATLAPAHADTTGLIEPAHLSVDGSLPAAQRDAQILAAR CCCHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHH RYDTFWHNGDPALARAALADDFADRTPPPGRAPGLAGPLAASRTMRAAIPDLSCEIEQMI HCCCCEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHH VAGERVVVHLRFRGHFTGRFGPVQGKGQAIDFIATDIYRIERGRIAENWHIEDNLTLLRE HCCCEEEEEEEECCEECCCCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCEECCCHHHHHH LGIAA CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA