| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126455025
Identifier: 126455025
GI number: 126455025
Start: 1044194
End: 1044916
Strand: Direct
Name: 126455025
Synonym: BURPS1106A_1065
Alternate gene names: NA
Gene position: 1044194-1044916 (Clockwise)
Preceding gene: 126454145
Following gene: 126452262
Centisome position: 26.18
GC content: 73.72
Gene sequence:
>723_bases ATGACGGCAGTCCGCAAGACGCTCGTGCGTTTCGCCGCCGCCGCGCTCGCCGGCTGGCTCGCGGCGGCGGCGGCGGGCGC GGCGCACGCCGAGGTCGCCGCCGCCGATCCGATCGACGTCGCGATGCGCCAGTGTCTCGCGCGGCGCGACCGCTCGTCGA CGGCGGGCCAGATCCAGTGCATGGACGAGGCGCGGCAGCAGTGGCAGGGCGAGGTCGACGCCGCGTACCAGCGGCTCCTG AAGACGGCGCCCGCCGACGCGCGGCGCGGCTGGCAGGAGAGCCAGCGCCGCTGGCTCGCGTGGCGCAAGGACGAGGCGCA TCTCGTGCGCGCGGTCTACGAGACGACGCAGGGCACGATGTACGCGATGGCGAACGCCGACATGCGGCTGCAGCCGGTGC GCGAGCGCGCGCTCGCGCTGCGCGGCGCGGCCGACCGCTACTACGCGCAGCCGGGCGGCGGCAAGGGCGCCGTGCATCGC GTGCGGCCCTGCATGCGCGATGCGGCGTGCGAGCACGCGCTCTTCGACATGAACCGCTATTACGAGAAACTGCGCGCGCG GATGCCCGCCGATTCGCTGCCGACGCTCGTCGCCGCGCAACGCGAATGGGCGGCGTTTCGCGACGCGATGACGCCGCTCG TCAGCGAGAGCGAGCGCGTCGATCTGATCGGCGCGCGCGTCGCGACGCTCAAGCGCTTCTCCGAGACCGTCAACAATCGC TGA
Upstream 100 bases:
>100_bases ACGAGCGCTTCCCGGGCTTTCACACGGACATCCACGGCCTCGTCGCCGAAGAGATGAACGGCCGCATCGAGTACTACGTC GACTGCGTGCGCGATTGACG
Downstream 100 bases:
>100_bases ACGCCGCGCGGGCAGCGTGCGCGTTCGGTGCGCGCGTCGCTCATCGGGCGGCGTGAGCGTTCGCTCGTTGTTCGGCCGAC ATCGAATTCGCGCTTGGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MTAVRKTLVRFAAAALAGWLAAAAAGAAHAEVAAADPIDVAMRQCLARRDRSSTAGQIQCMDEARQQWQGEVDAAYQRLL KTAPADARRGWQESQRRWLAWRKDEAHLVRAVYETTQGTMYAMANADMRLQPVRERALALRGAADRYYAQPGGGKGAVHR VRPCMRDAACEHALFDMNRYYEKLRARMPADSLPTLVAAQREWAAFRDAMTPLVSESERVDLIGARVATLKRFSETVNNR
Sequences:
>Translated_240_residues MTAVRKTLVRFAAAALAGWLAAAAAGAAHAEVAAADPIDVAMRQCLARRDRSSTAGQIQCMDEARQQWQGEVDAAYQRLL KTAPADARRGWQESQRRWLAWRKDEAHLVRAVYETTQGTMYAMANADMRLQPVRERALALRGAADRYYAQPGGGKGAVHR VRPCMRDAACEHALFDMNRYYEKLRARMPADSLPTLVAAQREWAAFRDAMTPLVSESERVDLIGARVATLKRFSETVNNR >Mature_239_residues TAVRKTLVRFAAAALAGWLAAAAAGAAHAEVAAADPIDVAMRQCLARRDRSSTAGQIQCMDEARQQWQGEVDAAYQRLLK TAPADARRGWQESQRRWLAWRKDEAHLVRAVYETTQGTMYAMANADMRLQPVRERALALRGAADRYYAQPGGGKGAVHRV RPCMRDAACEHALFDMNRYYEKLRARMPADSLPTLVAAQREWAAFRDAMTPLVSESERVDLIGARVATLKRFSETVNNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26763; Mature: 26632
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAVRKTLVRFAAAALAGWLAAAAAGAAHAEVAAADPIDVAMRQCLARRDRSSTAGQIQC CHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHH MDEARQQWQGEVDAAYQRLLKTAPADARRGWQESQRRWLAWRKDEAHLVRAVYETTQGTM HHHHHHHHCCCHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCE YAMANADMRLQPVRERALALRGAADRYYAQPGGGKGAVHRVRPCMRDAACEHALFDMNRY EEEECCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH YEKLRARMPADSLPTLVAAQREWAAFRDAMTPLVSESERVDLIGARVATLKRFSETVNNR HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TAVRKTLVRFAAAALAGWLAAAAAGAAHAEVAAADPIDVAMRQCLARRDRSSTAGQIQC HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHH MDEARQQWQGEVDAAYQRLLKTAPADARRGWQESQRRWLAWRKDEAHLVRAVYETTQGTM HHHHHHHHCCCHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCE YAMANADMRLQPVRERALALRGAADRYYAQPGGGKGAVHRVRPCMRDAACEHALFDMNRY EEEECCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH YEKLRARMPADSLPTLVAAQREWAAFRDAMTPLVSESERVDLIGARVATLKRFSETVNNR HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA