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The map label for this gene is yaeJ [C]

Identifier: 126454932

GI number: 126454932

Start: 1371090

End: 1371494

Strand: Direct

Name: yaeJ [C]

Synonym: BURPS1106A_1392

Alternate gene names: 126454932

Gene position: 1371090-1371494 (Clockwise)

Preceding gene: 126451603

Following gene: 126453903

Centisome position: 34.38

GC content: 68.4

Gene sequence:

>405_bases
ATGACGCTGCGCTACGCATTCTCGCCGGACGAGGTCGAGCTGACGGCGGTTCGCGCGCAAGGCGCGGGCGGGCAGAACGT
CAACAAGGTATCGAGCGCGATTCATCTGCGCTTCGACATTCGCGCGTCGTCACTGCCCGACGACGTGAAGGCGCGGCTTT
TCGCACGCGCCGATCAGCGAATCACGCGCGAAGGCGTCATCGTCATCAAGGCGCAGGAGTACCGCACGCAGGAAAAGAAC
CGCGCGGCCGCGCTGGCGCGGCTCGACACGCTGATTCGCAGCGCGGGCGTCACGCCGCGCAAGCGGGTCGCGACGCGGCC
GACGCGTGCGTCGAAGGAGCGCCGGCTTGCCGAGAAGGGGCGGCGCAGCGAGGTGAAATCCGGGCGCGGCAGAGTCGTCG
AATGA

Upstream 100 bases:

>100_bases
GCGCGGTGCTCGCGCTCGCGATCGCGACGCGCACGGCGCGCGATTCCGGCCTTGCCGCACGAATCGCCGATGCGCTGCGC
GCGCGGCAGGAGGGCGCGCG

Downstream 100 bases:

>100_bases
CGGTGGCCGGCAGCCGGTTTTGTCGCGGCAAATGCCGTGCGCGCAACGGGCGCGACGCGCGGGCGACGCCGGGCGGCGGC
CGGTGACGGCTGCGTCGGGT

Product: peptidyl-tRNA hydrolase domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MTLRYAFSPDEVELTAVRAQGAGGQNVNKVSSAIHLRFDIRASSLPDDVKARLFARADQRITREGVIVIKAQEYRTQEKN
RAAALARLDTLIRSAGVTPRKRVATRPTRASKERRLAEKGRRSEVKSGRGRVVE

Sequences:

>Translated_134_residues
MTLRYAFSPDEVELTAVRAQGAGGQNVNKVSSAIHLRFDIRASSLPDDVKARLFARADQRITREGVIVIKAQEYRTQEKN
RAAALARLDTLIRSAGVTPRKRVATRPTRASKERRLAEKGRRSEVKSGRGRVVE
>Mature_133_residues
TLRYAFSPDEVELTAVRAQGAGGQNVNKVSSAIHLRFDIRASSLPDDVKARLFARADQRITREGVIVIKAQEYRTQEKNR
AAALARLDTLIRSAGVTPRKRVATRPTRASKERRLAEKGRRSEVKSGRGRVVE

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic/mitochondrial release factor family [H]

Homologues:

Organism=Escherichia coli, GI1786389, Length=130, Percent_Identity=62.3076923076923, Blast_Score=154, Evalue=2e-39,
Organism=Drosophila melanogaster, GI19921098, Length=133, Percent_Identity=34.5864661654135, Blast_Score=66, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000352 [H]

Pfam domain/function: PF00472 RF-1 [H]

EC number: NA

Molecular weight: Translated: 14955; Mature: 14824

Theoretical pI: Translated: 11.92; Mature: 11.92

Prosite motif: PS00745 RF_PROK_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLRYAFSPDEVELTAVRAQGAGGQNVNKVSSAIHLRFDIRASSLPDDVKARLFARADQR
CEEEECCCCCCEEEEEEEECCCCCCCHHHHHHEEEEEEEEECCCCCHHHHHHHHHHHHHH
ITREGVIVIKAQEYRTQEKNRAAALARLDTLIRSAGVTPRKRVATRPTRASKERRLAEKG
HCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHC
RRSEVKSGRGRVVE
CHHHHHCCCCCCCC
>Mature Secondary Structure 
TLRYAFSPDEVELTAVRAQGAGGQNVNKVSSAIHLRFDIRASSLPDDVKARLFARADQR
EEEECCCCCCEEEEEEEECCCCCCCHHHHHHEEEEEEEEECCCCCHHHHHHHHHHHHHH
ITREGVIVIKAQEYRTQEKNRAAALARLDTLIRSAGVTPRKRVATRPTRASKERRLAEKG
HCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHC
RRSEVKSGRGRVVE
CHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1624453 [H]