| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126454787
Identifier: 126454787
GI number: 126454787
Start: 1503217
End: 1503639
Strand: Reverse
Name: 126454787
Synonym: BURPS1106A_1554
Alternate gene names: NA
Gene position: 1503639-1503217 (Counterclockwise)
Preceding gene: 126451787
Following gene: 126451665
Centisome position: 37.7
GC content: 70.92
Gene sequence:
>423_bases GTGGCCAAGCGCGCGATCATCTGCGTCGGCGACACGACGACACACGGCGGCAAGGTGCTCGAAGGCGCGCCGACGTTCAC GCTCAACGGACGCAATGTGGCCGGCGTCGGCCACCAGGTACTTTGCCCGCGTTGCAAGGGCATTTTCCCGATCCTCCCCG ACTTGCTCGGCCGCCGCTACCCGCACACGATCGGCGAGCGCGACACCGCCGTCGAGGGCATGCGAACGGCCTGCGGCGCG GAGTTGATCGCATCGCAGGGCACCGGAACGATCGACGACGTCGGCGCGGGCGAGCGCGGGGACGGCGGCTCACCCGGCGG ATCGGCAGCCGCAGCGGCGACCGTCGCCCCTTCCCCCACGCTCTGCCTCGAATGCCTGAAGGCGGCGGCCAAGAACGCCG CGACGATGGTCGCACGCGGATGA
Upstream 100 bases:
>100_bases CCGTCAAACCTGACAGGTGTCGCGACAGCACAACCGTAACAGTCGCCCGCCGGGCGCGCTCGATGGTAAATTGGCACGCC AATTTCCATGAGAGGGGCCA
Downstream 100 bases:
>100_bases CCATGACGCAGCCGGCCATCGAAGCGCATTTCGAGATGCGCCGCCAGCAAATCACGCTGCCCTCGCGGCTTTTCGCGATG GTCGACGCGCTGCTCTTCGC
Product: PAAR motif-containing protein
Products: NA
Alternate protein names: PAAR Motif Family; PaaR Motif-Containing Protein; Paar Repeat-Containing Protein; PAAR Motif-Containing Protein
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MAKRAIICVGDTTTHGGKVLEGAPTFTLNGRNVAGVGHQVLCPRCKGIFPILPDLLGRRYPHTIGERDTAVEGMRTACGA ELIASQGTGTIDDVGAGERGDGGSPGGSAAAAATVAPSPTLCLECLKAAAKNAATMVARG
Sequences:
>Translated_140_residues MAKRAIICVGDTTTHGGKVLEGAPTFTLNGRNVAGVGHQVLCPRCKGIFPILPDLLGRRYPHTIGERDTAVEGMRTACGA ELIASQGTGTIDDVGAGERGDGGSPGGSAAAAATVAPSPTLCLECLKAAAKNAATMVARG >Mature_139_residues AKRAIICVGDTTTHGGKVLEGAPTFTLNGRNVAGVGHQVLCPRCKGIFPILPDLLGRRYPHTIGERDTAVEGMRTACGAE LIASQGTGTIDDVGAGERGDGGSPGGSAAAAATVAPSPTLCLECLKAAAKNAATMVARG
Specific function: Unknown
COG id: COG4104
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14013; Mature: 13882
Theoretical pI: Translated: 8.13; Mature: 8.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKRAIICVGDTTTHGGKVLEGAPTFTLNGRNVAGVGHQVLCPRCKGIFPILPDLLGRRY CCCCEEEEECCCCCCCCEEECCCCEEEECCCEECCCCCCEECCCCCCCCHHHHHHHCCCC PHTIGERDTAVEGMRTACGAELIASQGTGTIDDVGAGERGDGGSPGGSAAAAATVAPSPT CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHH LCLECLKAAAKNAATMVARG HHHHHHHHHHCCHHHEEECC >Mature Secondary Structure AKRAIICVGDTTTHGGKVLEGAPTFTLNGRNVAGVGHQVLCPRCKGIFPILPDLLGRRY CCCEEEEECCCCCCCCEEECCCCEEEECCCEECCCCCCEECCCCCCCCHHHHHHHCCCC PHTIGERDTAVEGMRTACGAELIASQGTGTIDDVGAGERGDGGSPGGSAAAAATVAPSPT CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHH LCLECLKAAAKNAATMVARG HHHHHHHHHHCCHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA