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The map label for this gene is mocR [H]

Identifier: 126451787

GI number: 126451787

Start: 1506344

End: 1507483

Strand: Reverse

Name: mocR [H]

Synonym: BURPS1106A_1557

Alternate gene names: 126451787

Gene position: 1507483-1506344 (Counterclockwise)

Preceding gene: 126454698

Following gene: 126454787

Centisome position: 37.8

GC content: 67.19

Gene sequence:

>1140_bases
ATGTCGCAGTGGGCGCAGCGGATCGACCGGAGCGATTGGCCGTTCATCGGCGAGGGGCGCCCGACGCCATTCGCGCCCTG
CGTGGCCGATGCCCGGGCGTTTCCGCACGCGATCTGGGGGCGATGCCTGCGCACGGCCACCCGCTACGCCGTCGCGCGAA
CGAGCACCGCGTGCAACCGGCCCGGGTTACGCAGGGCCCTGTTGCATCACCTCGTCGAATACCGCGGCGTCAACGCGGAT
GCGCACCAGGTCTTCCTGATGCCCACGGCTCAGGCGGCCATCGCGCTCGTCGCACGCGTGCTCCTGGATCCGGGTGACCT
CGCGTGGGTCGAAAGCCCGGGTTACGGCGGCGCACGGGCGGCGTTCGAAGCGGCGGGCGCGACGGTGCAAGGCATCGCGC
TCGATCAAAGCGGCATGGCGTTCGAAACGTCGACGGATACCCCGCGCCTGATATTCGTCACGCCCGCGCACCAGCATCCG
ACGGGATTGCTGATGCCGCCTGCCCGTCGACAAGCGCTGCTGCGGTTCGCCGCTCGAGTCGGCGCCCGGATCATCGAGGA
CGACTACGACAGCGAATTTCATTACGAAGGGCGCCCGGTGGCCGCGCTGCAGGGTGCCGACAACGCAGACAGCGTGTTTT
ACGTCGGCACGTTCTCGAAATCGCTGCACGCCGACATTCGAGTGGGTTACGTCGTCGTACCGGGGCACTTCGTCGACGTA
TTTGCCAAGGCACAACGGCACACCGGCCAGATCGTCGGCGCGACGCTACAGGATGCGTTGGCCGAGTTCATCGACGACGG
ACATTACGCCGCTCACATCCGCAAGACGACGCGCCTCTATCACGCTCGACGCGATTACCTGTGCGATGCGTTGAAGGCCG
TCGGGAGCGAGTTGACCGTATCGCCGCCGGATGGCGGTATGCAGGTGGTAGCCCGGCTCGGGCCCCTGCGCGACGATCGC
GAGATATGCCGCCGCCTGGCCGAAGCGGGCGTGACGGCGCGCCCGCTTTCGCCCCATTACTGCGCGCAAACCGGCGCCCA
AGGGCTATTCCTCGGCTTCGCGGCCTGGAACGAATGCGAGATCGACGCAGGCGTGCGGATTCTCGCTCGCGTGATTCGCG
AGCCGGAGCCATCGAAATAG

Upstream 100 bases:

>100_bases
CGATGTCTCGAGAGGACGCCGCCCGGTCGTGGCGCCGATGCCGTCGGCGGGCCTCGTCGCCATCGGCTCGGACAGGCCTG
TTTCGGACGGCCGCAGCGGA

Downstream 100 bases:

>100_bases
CGATTCGCCCCGCCGGCCGGCGGCGCCCGCGGCCGAACCGGCCGCCCGGGGAAACCGGACGCGCCGTTAGACGGTTGCCA
GAATCAGGCGCGCCGGCGTC

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 378

Protein sequence:

>379_residues
MSQWAQRIDRSDWPFIGEGRPTPFAPCVADARAFPHAIWGRCLRTATRYAVARTSTACNRPGLRRALLHHLVEYRGVNAD
AHQVFLMPTAQAAIALVARVLLDPGDLAWVESPGYGGARAAFEAAGATVQGIALDQSGMAFETSTDTPRLIFVTPAHQHP
TGLLMPPARRQALLRFAARVGARIIEDDYDSEFHYEGRPVAALQGADNADSVFYVGTFSKSLHADIRVGYVVVPGHFVDV
FAKAQRHTGQIVGATLQDALAEFIDDGHYAAHIRKTTRLYHARRDYLCDALKAVGSELTVSPPDGGMQVVARLGPLRDDR
EICRRLAEAGVTARPLSPHYCAQTGAQGLFLGFAAWNECEIDAGVRILARVIREPEPSK

Sequences:

>Translated_379_residues
MSQWAQRIDRSDWPFIGEGRPTPFAPCVADARAFPHAIWGRCLRTATRYAVARTSTACNRPGLRRALLHHLVEYRGVNAD
AHQVFLMPTAQAAIALVARVLLDPGDLAWVESPGYGGARAAFEAAGATVQGIALDQSGMAFETSTDTPRLIFVTPAHQHP
TGLLMPPARRQALLRFAARVGARIIEDDYDSEFHYEGRPVAALQGADNADSVFYVGTFSKSLHADIRVGYVVVPGHFVDV
FAKAQRHTGQIVGATLQDALAEFIDDGHYAAHIRKTTRLYHARRDYLCDALKAVGSELTVSPPDGGMQVVARLGPLRDDR
EICRRLAEAGVTARPLSPHYCAQTGAQGLFLGFAAWNECEIDAGVRILARVIREPEPSK
>Mature_378_residues
SQWAQRIDRSDWPFIGEGRPTPFAPCVADARAFPHAIWGRCLRTATRYAVARTSTACNRPGLRRALLHHLVEYRGVNADA
HQVFLMPTAQAAIALVARVLLDPGDLAWVESPGYGGARAAFEAAGATVQGIALDQSGMAFETSTDTPRLIFVTPAHQHPT
GLLMPPARRQALLRFAARVGARIIEDDYDSEFHYEGRPVAALQGADNADSVFYVGTFSKSLHADIRVGYVVVPGHFVDVF
AKAQRHTGQIVGATLQDALAEFIDDGHYAAHIRKTTRLYHARRDYLCDALKAVGSELTVSPPDGGMQVVARLGPLRDDRE
ICRRLAEAGVTARPLSPHYCAQTGAQGLFLGFAAWNECEIDAGVRILARVIREPEPSK

Specific function: Could play a regulatory role in the transcription of the moc genes for rhizopine catabolism. Could also have an aminotransferase activity [H]

COG id: COG1167

COG function: function code KE; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Homo sapiens, GI7705897, Length=308, Percent_Identity=21.4285714285714, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI33469970, Length=308, Percent_Identity=21.4285714285714, Blast_Score=79, Evalue=6e-15,
Organism=Escherichia coli, GI1790797, Length=260, Percent_Identity=27.3076923076923, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1787710, Length=299, Percent_Identity=25.0836120401338, Blast_Score=86, Evalue=3e-18,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004839
- InterPro:   IPR000524
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00155 Aminotran_1_2; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 41327; Mature: 41196

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQWAQRIDRSDWPFIGEGRPTPFAPCVADARAFPHAIWGRCLRTATRYAVARTSTACNR
CCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PGLRRALLHHLVEYRGVNADAHQVFLMPTAQAAIALVARVLLDPGDLAWVESPGYGGARA
CHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHCCCCCEEEEECCCCCCHHH
AFEAAGATVQGIALDQSGMAFETSTDTPRLIFVTPAHQHPTGLLMPPARRQALLRFAARV
HHHHCCCEEEEEEECCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
GARIIEDDYDSEFHYEGRPVAALQGADNADSVFYVGTFSKSLHADIRVGYVVVPGHFVDV
HHHHHCCCCCCCEEECCCCEEEECCCCCCCCEEEEEECCCCCCCCEEEEEEEECCHHHHH
FAKAQRHTGQIVGATLQDALAEFIDDGHYAAHIRKTTRLYHARRDYLCDALKAVGSELTV
HHHHHHHCCCEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
SPPDGGMQVVARLGPLRDDREICRRLAEAGVTARPLSPHYCAQTGAQGLFLGFAAWNECE
CCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCCEEEEEEECCCCCC
IDAGVRILARVIREPEPSK
CHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SQWAQRIDRSDWPFIGEGRPTPFAPCVADARAFPHAIWGRCLRTATRYAVARTSTACNR
CHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PGLRRALLHHLVEYRGVNADAHQVFLMPTAQAAIALVARVLLDPGDLAWVESPGYGGARA
CHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHCCCCCEEEEECCCCCCHHH
AFEAAGATVQGIALDQSGMAFETSTDTPRLIFVTPAHQHPTGLLMPPARRQALLRFAARV
HHHHCCCEEEEEEECCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
GARIIEDDYDSEFHYEGRPVAALQGADNADSVFYVGTFSKSLHADIRVGYVVVPGHFVDV
HHHHHCCCCCCCEEECCCCEEEECCCCCCCCEEEEEECCCCCCCCEEEEEEEECCHHHHH
FAKAQRHTGQIVGATLQDALAEFIDDGHYAAHIRKTTRLYHARRDYLCDALKAVGSELTV
HHHHHHHCCCEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
SPPDGGMQVVARLGPLRDDREICRRLAEAGVTARPLSPHYCAQTGAQGLFLGFAAWNECE
CCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCCEEEEEEECCCCCC
IDAGVRILARVIREPEPSK
CHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7845353 [H]