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The map label for this gene is yhhS [C]

Identifier: 126454752

GI number: 126454752

Start: 3117233

End: 3118456

Strand: Direct

Name: yhhS [C]

Synonym: BURPS1106A_3201

Alternate gene names: 126454752

Gene position: 3117233-3118456 (Clockwise)

Preceding gene: 126452081

Following gene: 126453049

Centisome position: 78.16

GC content: 71.9

Gene sequence:

>1224_bases
ATGTCTGCCGATTCAGCCGATTCCGTCCCGTCCCCCCGCAGCGCGTTCGCGACGACGCTGCAGATCGTCTCCGTCGTGTC
GTTCACGTTCATCTGCTATCTGACGATCGGCCTGCCGCTCGCGGTGCTGCCGGGTTTCGTTCATGACGAGCTCGGCTTTT
CGGCGATCGTCGCGGGCGCGGCGATCAGCGTCCAGTACTTCGCGACGCTCGCGTCGCGGCCGCTCGCGGGCCGCTGCGCG
GACACGCTCGGCCCGAAGCGCACCGTGCTGCGCGGGCTCGCCGCGTGCGGCGCGAGCGGCGCGCTCTTGCTGTCCGCGTT
CGCGTTCGCGCGCTGGCCGGCCGCGAGCATCGTGCTGCTGGTCGCGAGCCGGCTCGTGCTCGGCATCGGCGAGAGCCTCG
TCGGCACGGGCGCGATCCTATGGGGAATCGGCCGCGTCGGCACCGCGCACAACGCGCGCGTGATTTCGTGGAACGGCATC
GCGACGTACGGCGCGCTCGCGATCGGCGCGCCCGTCGGCGTCGCGATCTCGCACGCGCTGATCCCCGCCGTGCTCGGCAT
GCTCGTGATCGCGCTCGCCGCGCTCGGCTACTATCTCGCACGGCTGATCACGCCCGTGCCGCTCGTGCACGGCGAGCGGA
TGTCGTACGCGAGCGTGCTCACCCGCGTGCTGCCGCACGGCCTCGGCCTCGCGCTCGGCTCGGCCGGTTTCGGCTCGATC
GCGACGTTCATCACGCTCTACTACGCGGCGCGGCACTGGCCGAACGCCGCGCTGTCGCTGACCGTGTTCGGCACGCTGTT
CATCGGCGCGCGCCTGTTGTTCGCGAACACGATCAAGACGCACGGCGGGTTCCGCGTCGCGATCGTGTCGTTCGCGTTCG
AATGCGCGGGCCTCCTGATGCTGTGGCTCGCACCCGTGCCGCACGTCGCGCTCGTCGGCGCCGCGTTGACGGGCTTCGGC
TTCGCGCTGATCTTCCCCGCGCTCGGCGTCGAGGCGGTCGCGCTCGTGCCGCCCGCGAGCCGCGGCGCGGCGCTGTCCGC
GTATTCGGTGTTCCTCGATCTGTCGCTCGGCATCACGGGGCCGCTCGCCGGTTATGTCGCGGGCGCATTCGGCTATCCGC
AGGTGTTCCTGTGCGCGGCCGTGGCGGCGGCGGCGGGCGTCGCGCTATCGACGGTGCTGTATCAGCGGCAGGCGCGCCTG
TCCGGCAGCGGCGCGGCCGCCTGA

Upstream 100 bases:

>100_bases
TTGCGTGGTGTTTAACTAAGCGGTACCTGCAAGAAAACCGGTTCCATGTAAAAATTCGGCTTTCGCATCAAATGGATGCG
CGCCTTCGTTCCCTCCCCCT

Downstream 100 bases:

>100_bases
GCTCGCGGCTCGCGGCATCGCCTTCGACGGCGGCCGCGCCGTCCGGCCGCGAAGCGAAGCGGACGGTATAGGGACGAAAG
GCCGCCCGCCCGTGCATCGC

Product: major facilitator superfamily transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 406

Protein sequence:

>407_residues
MSADSADSVPSPRSAFATTLQIVSVVSFTFICYLTIGLPLAVLPGFVHDELGFSAIVAGAAISVQYFATLASRPLAGRCA
DTLGPKRTVLRGLAACGASGALLLSAFAFARWPAASIVLLVASRLVLGIGESLVGTGAILWGIGRVGTAHNARVISWNGI
ATYGALAIGAPVGVAISHALIPAVLGMLVIALAALGYYLARLITPVPLVHGERMSYASVLTRVLPHGLGLALGSAGFGSI
ATFITLYYAARHWPNAALSLTVFGTLFIGARLLFANTIKTHGGFRVAIVSFAFECAGLLMLWLAPVPHVALVGAALTGFG
FALIFPALGVEAVALVPPASRGAALSAYSVFLDLSLGITGPLAGYVAGAFGYPQVFLCAAVAAAAGVALSTVLYQRQARL
SGSGAAA

Sequences:

>Translated_407_residues
MSADSADSVPSPRSAFATTLQIVSVVSFTFICYLTIGLPLAVLPGFVHDELGFSAIVAGAAISVQYFATLASRPLAGRCA
DTLGPKRTVLRGLAACGASGALLLSAFAFARWPAASIVLLVASRLVLGIGESLVGTGAILWGIGRVGTAHNARVISWNGI
ATYGALAIGAPVGVAISHALIPAVLGMLVIALAALGYYLARLITPVPLVHGERMSYASVLTRVLPHGLGLALGSAGFGSI
ATFITLYYAARHWPNAALSLTVFGTLFIGARLLFANTIKTHGGFRVAIVSFAFECAGLLMLWLAPVPHVALVGAALTGFG
FALIFPALGVEAVALVPPASRGAALSAYSVFLDLSLGITGPLAGYVAGAFGYPQVFLCAAVAAAAGVALSTVLYQRQARL
SGSGAAA
>Mature_406_residues
SADSADSVPSPRSAFATTLQIVSVVSFTFICYLTIGLPLAVLPGFVHDELGFSAIVAGAAISVQYFATLASRPLAGRCAD
TLGPKRTVLRGLAACGASGALLLSAFAFARWPAASIVLLVASRLVLGIGESLVGTGAILWGIGRVGTAHNARVISWNGIA
TYGALAIGAPVGVAISHALIPAVLGMLVIALAALGYYLARLITPVPLVHGERMSYASVLTRVLPHGLGLALGSAGFGSIA
TFITLYYAARHWPNAALSLTVFGTLFIGARLLFANTIKTHGGFRVAIVSFAFECAGLLMLWLAPVPHVALVGAALTGFGF
ALIFPALGVEAVALVPPASRGAALSAYSVFLDLSLGITGPLAGYVAGAFGYPQVFLCAAVAAAAGVALSTVLYQRQARLS
GSGAAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0226 family [H]

Homologues:

Organism=Escherichia coli, GI87082270, Length=378, Percent_Identity=51.5873015873016, Blast_Score=338, Evalue=3e-94,
Organism=Escherichia coli, GI1788662, Length=367, Percent_Identity=46.3215258855586, Blast_Score=265, Evalue=3e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR023008 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 41306; Mature: 41175

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSADSADSVPSPRSAFATTLQIVSVVSFTFICYLTIGLPLAVLPGFVHDELGFSAIVAGA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHCCHHHHHHHH
AISVQYFATLASRPLAGRCADTLGPKRTVLRGLAACGASGALLLSAFAFARWPAASIVLL
HHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHH
VASRLVLGIGESLVGTGAILWGIGRVGTAHNARVISWNGIATYGALAIGAPVGVAISHAL
HHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHCCCHHHHHHHHH
IPAVLGMLVIALAALGYYLARLITPVPLVHGERMSYASVLTRVLPHGLGLALGSAGFGSI
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHH
ATFITLYYAARHWPNAALSLTVFGTLFIGARLLFANTIKTHGGFRVAIVSFAFECAGLLM
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHH
LWLAPVPHVALVGAALTGFGFALIFPALGVEAVALVPPASRGAALSAYSVFLDLSLGITG
HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCC
PLAGYVAGAFGYPQVFLCAAVAAAAGVALSTVLYQRQARLSGSGAAA
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SADSADSVPSPRSAFATTLQIVSVVSFTFICYLTIGLPLAVLPGFVHDELGFSAIVAGA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHCCHHHHHHHH
AISVQYFATLASRPLAGRCADTLGPKRTVLRGLAACGASGALLLSAFAFARWPAASIVLL
HHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHH
VASRLVLGIGESLVGTGAILWGIGRVGTAHNARVISWNGIATYGALAIGAPVGVAISHAL
HHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHCCCHHHHHHHHH
IPAVLGMLVIALAALGYYLARLITPVPLVHGERMSYASVLTRVLPHGLGLALGSAGFGSI
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHH
ATFITLYYAARHWPNAALSLTVFGTLFIGARLLFANTIKTHGGFRVAIVSFAFECAGLLM
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHH
LWLAPVPHVALVGAALTGFGFALIFPALGVEAVALVPPASRGAALSAYSVFLDLSLGITG
HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCC
PLAGYVAGAFGYPQVFLCAAVAAAAGVALSTVLYQRQARLSGSGAAA
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA