| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126451579
Identifier: 126451579
GI number: 126451579
Start: 1251204
End: 1251959
Strand: Reverse
Name: 126451579
Synonym: BURPS1106A_1277
Alternate gene names: NA
Gene position: 1251959-1251204 (Counterclockwise)
Preceding gene: 126454392
Following gene: 126454694
Centisome position: 31.39
GC content: 71.16
Gene sequence:
>756_bases GTGAGTCAAAAACGGGGATTGGCTGTCTTTTTCGGTTGCGTGATCGCGCTCGTCGTCGCGTACGCCGCCACCTACCCGCG CTTTCACCCACAACCGGCCGCCGTAGCCGCGGCGAGCGCGCCCGTGATCGCGTCGGCGGCGATCGCGCTGCCATCGGGCG AGTTCCCGCCGCTGCCGCCGTCGAGCCCGCTCTCCTGGGGCCGCCTCACGCCGCAGCAGCACGTCGCGCTCGCGCCGTTC GCGAGTCAATGGGATTCGTTCAGCGACGAGCGCAAGCGCAAATGGCTGAAGATCGCGGCGCGCTTCCCGAGGATGTCGCC TGAAGCGCAAAAGCGCCTGCAGGAACGCATGACCGAGTGGGTGCGGATGACGCCCGAGCAGCGCCGTGTCGCGCGCGAAA ACTACCTGGTGTCGAAGGATCTGTCCGCCCAGGCTCGCGAGAAAGCCTGGAAGGCTTACCAACAGCTGTCGCCCGAGCAG AAGGAAAAGCTCGCCGCGGCCGAGCGCCGGCGCCGGCCGACGGTCGTCAGCGCGCCGCCCACCGGCAAGACCGATCGCGA CATCAACCGGCTCGTCAACGCGCACGACCGCCATCCGGCGAGCGCGCCCACCGCGAGCATCGCGCCGTCCGCGGCGAGCG CGCCCGCCGCGGCGCCCGTGCCGGCCTCGCCCGCGACGACGGGCGCCGTCACGCCGCCCACCGCGCCGACGCCCGTCTCG CCTTCCGAGGCGCCGTCGCTCTTCAACGGTTCGTAA
Upstream 100 bases:
>100_bases GAGCGACGACCTGCCTCTCACCGCGTACCTCGACCACGGGTTCAACGCGTACCTTTCGCATACTCACTAACGCCAACGCA TCAAGAAGAGGAACGCACGG
Downstream 100 bases:
>100_bases GCGCTCGTGATCGCGCCCGCGCTCCCGTCCGAGCCGCCGCCGCCGAGCGTGCGCCGCCGGCTCGCCGCGCTCGCGTACGA AAGCCTGCTGCTGTTCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MSQKRGLAVFFGCVIALVVAYAATYPRFHPQPAAVAAASAPVIASAAIALPSGEFPPLPPSSPLSWGRLTPQQHVALAPF ASQWDSFSDERKRKWLKIAARFPRMSPEAQKRLQERMTEWVRMTPEQRRVARENYLVSKDLSAQAREKAWKAYQQLSPEQ KEKLAAAERRRRPTVVSAPPTGKTDRDINRLVNAHDRHPASAPTASIAPSAASAPAAAPVPASPATTGAVTPPTAPTPVS PSEAPSLFNGS
Sequences:
>Translated_251_residues MSQKRGLAVFFGCVIALVVAYAATYPRFHPQPAAVAAASAPVIASAAIALPSGEFPPLPPSSPLSWGRLTPQQHVALAPF ASQWDSFSDERKRKWLKIAARFPRMSPEAQKRLQERMTEWVRMTPEQRRVARENYLVSKDLSAQAREKAWKAYQQLSPEQ KEKLAAAERRRRPTVVSAPPTGKTDRDINRLVNAHDRHPASAPTASIAPSAASAPAAAPVPASPATTGAVTPPTAPTPVS PSEAPSLFNGS >Mature_250_residues SQKRGLAVFFGCVIALVVAYAATYPRFHPQPAAVAAASAPVIASAAIALPSGEFPPLPPSSPLSWGRLTPQQHVALAPFA SQWDSFSDERKRKWLKIAARFPRMSPEAQKRLQERMTEWVRMTPEQRRVARENYLVSKDLSAQAREKAWKAYQQLSPEQK EKLAAAERRRRPTVVSAPPTGKTDRDINRLVNAHDRHPASAPTASIAPSAASAPAAAPVPASPATTGAVTPPTAPTPVSP SEAPSLFNGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27023; Mature: 26892
Theoretical pI: Translated: 11.13; Mature: 11.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQKRGLAVFFGCVIALVVAYAATYPRFHPQPAAVAAASAPVIASAAIALPSGEFPPLPP CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHCCCCCCCCCCCC SSPLSWGRLTPQQHVALAPFASQWDSFSDERKRKWLKIAARFPRMSPEAQKRLQERMTEW CCCCCCCCCCHHHHEEECCHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH VRMTPEQRRVARENYLVSKDLSAQAREKAWKAYQQLSPEQKEKLAAAERRRRPTVVSAPP HHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEECCC TGKTDRDINRLVNAHDRHPASAPTASIAPSAASAPAAAPVPASPATTGAVTPPTAPTPVS CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PSEAPSLFNGS CCCCCCCCCCC >Mature Secondary Structure SQKRGLAVFFGCVIALVVAYAATYPRFHPQPAAVAAASAPVIASAAIALPSGEFPPLPP CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHCCCCCCCCCCCC SSPLSWGRLTPQQHVALAPFASQWDSFSDERKRKWLKIAARFPRMSPEAQKRLQERMTEW CCCCCCCCCCHHHHEEECCHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH VRMTPEQRRVARENYLVSKDLSAQAREKAWKAYQQLSPEQKEKLAAAERRRRPTVVSAPP HHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEECCC TGKTDRDINRLVNAHDRHPASAPTASIAPSAASAPAAAPVPASPATTGAVTPPTAPTPVS CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PSEAPSLFNGS CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA