| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126454662
Identifier: 126454662
GI number: 126454662
Start: 1038992
End: 1039366
Strand: Reverse
Name: 126454662
Synonym: BURPS1106A_1060
Alternate gene names: NA
Gene position: 1039366-1038992 (Counterclockwise)
Preceding gene: 126455379
Following gene: 126452105
Centisome position: 26.06
GC content: 60.53
Gene sequence:
>375_bases GTGGGAACGTCGCTCAAATTCGCCCAAAAGGTCAACAACCTTCAAATATCCGGGCGTAAAGCGAGAAAAGTGAAAGAATT TATTGCACGCCATTGCGTAAAGCCGACTTGCGGCGCAATCTTCGCGGGCGGCGCGCTTCGGGGCCACATCGATGGCCACA CCGCCTATATTGTAGAGGCTGGGGCGCGCTCGGTCCGAACAGCCATCCTGGCGAACGGGGCTTGTCGCAACGACGACGGG CCTCAGGACCCGGCGCCGGACGGATCGAGGCGCCCGCGCGCCCGCACGATGGTCGTCGGCGCGCGGGTCGCTCCCGCCGA AAGAGCAGTTCTTTTTTGTTCTTGTCGAGTCACTCAAGAGAGGAAACCAAGATGA
Upstream 100 bases:
>100_bases GGATGCCGCGGTGCGCCGCATACGGGCGGCCGGTGTTCGGGTCGACGACTGCCGCGAGTGCGGCGTCGACGAGCGCCCTG TCGATACTCATCGGAACTCC
Downstream 100 bases:
>100_bases ATACCAAAATCGCGACACGCTTGTCCGTTTTCGCTCTCGCCGGCGCCCTGCTGGCGGGTTGCGCAACCCAGCAAGGCACC AACACGGCTGTCGGCACCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MGTSLKFAQKVNNLQISGRKARKVKEFIARHCVKPTCGAIFAGGALRGHIDGHTAYIVEAGARSVRTAILANGACRNDDG PQDPAPDGSRRPRARTMVVGARVAPAERAVLFCSCRVTQERKPR
Sequences:
>Translated_124_residues MGTSLKFAQKVNNLQISGRKARKVKEFIARHCVKPTCGAIFAGGALRGHIDGHTAYIVEAGARSVRTAILANGACRNDDG PQDPAPDGSRRPRARTMVVGARVAPAERAVLFCSCRVTQERKPR >Mature_123_residues GTSLKFAQKVNNLQISGRKARKVKEFIARHCVKPTCGAIFAGGALRGHIDGHTAYIVEAGARSVRTAILANGACRNDDGP QDPAPDGSRRPRARTMVVGARVAPAERAVLFCSCRVTQERKPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13339; Mature: 13207
Theoretical pI: Translated: 11.45; Mature: 11.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTSLKFAQKVNNLQISGRKARKVKEFIARHCVKPTCGAIFAGGALRGHIDGHTAYIVEA CCCCHHHHHHCCCEEECCHHHHHHHHHHHHHCCCCCCCCEECCCCEEECCCCCEEEEEEC GARSVRTAILANGACRNDDGPQDPAPDGSRRPRARTMVVGARVAPAERAVLFCSCRVTQE CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEEECCC RKPR CCCC >Mature Secondary Structure GTSLKFAQKVNNLQISGRKARKVKEFIARHCVKPTCGAIFAGGALRGHIDGHTAYIVEA CCCHHHHHHCCCEEECCHHHHHHHHHHHHHCCCCCCCCEECCCCEEECCCCCEEEEEEC GARSVRTAILANGACRNDDGPQDPAPDGSRRPRARTMVVGARVAPAERAVLFCSCRVTQE CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEEECCC RKPR CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA