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The map label for this gene is ycjP [C]

Identifier: 126454655

GI number: 126454655

Start: 861281

End: 862147

Strand: Direct

Name: ycjP [C]

Synonym: BURPS1106A_0878

Alternate gene names: 126454655

Gene position: 861281-862147 (Clockwise)

Preceding gene: 126455091

Following gene: 126453369

Centisome position: 21.59

GC content: 65.63

Gene sequence:

>867_bases
ATGAGCGATCTGACCGTATCGACCCCGCGCGGCGCATTCGGGGCGCCGCGCGCCGCGCTCGGCGCGCTCAAGCGCGCGCT
GCCCGGCCTGCTTGCGTGGCTCGTCGCGCTCGCGCTGTTCTTCCCGATCTTCTGGATGGCGATCACCGCGTTCAAGACCG
AGCAGCAGGCCTATTCGTCCGCGCTCTTCTTCGTGCCGACGCTCGACAGCTTTCGCGAGGTGTTCGCGCGCAGCAACTAC
TTCGCGTTCGCGTGGAACTCGGTGCTGATCTCGGCGGGCGTCACCGTGATCTGCCTGCTGCTCGCCGTGCCCGCCGCGTA
CGCGATGGCGTTCTTCCCGGGCCGGCGCACGCAGAAAGTGCTGCTGTGGATGCTGTCGACGAAGATGATGCCGTCCGTCG
GCGTGCTCGTGCCGATCTATCTGATGTGGAAGAACGCGGGCCTGCTCGATACCGTCTCGGGCCTCGTGATCGTCTATACG
CTGATCAACCTGCCGATCGCGGTGTGGATGACGTTCACGTACTTCAACGAGATCCCGAAGGACATTCTCGAGGCGGGGCG
TATCGACGGCGCGTCGACGTGGCAGGAGATCGTCTATCTGCTGATGCCGATGGCGCTGCCGGGTCTCGCGTCGACCGCGT
TGCTGCTCGTGATCCTGTCGTGGAACGAGGCGTTCTGGAGCATCAACCTGTCGAGCTCGAACGCCGCGCCGCTCACCGTG
TTCATCGCGTCGTACTCGAGCCCCGAAGGGCTCTTCTGGGCGAAGCTGTCGGCGGCGTCGCTGCTCGCGGTCGCGCCGAT
CCTCGTCGTCGGGTGGCTATCGCAGAAGCAGCTCGTGCGCGGCCTCACGTTCGGGGCGGTCAAATGA

Upstream 100 bases:

>100_bases
TCGCGTCGGCGGGCGGCATTCTCGCCGTCGTGCTCGCGAACGTCGTGTCGTTCTTCCTCGTGAGAATGCTCGCGCGGAAT
CTGAAAGGGGAGTACGAAGC

Downstream 100 bases:

>100_bases
CGGCGCACGCGAACGACGCGCGCGTGCTCATCTGCGATTGCGACGGCGTGCTGATCGACAGCGAGACGATCGCGGCCGAC
GTGCTCGTGCGCGAGCTCGA

Product: putative sorbitol/mannitol ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 287

Protein sequence:

>288_residues
MSDLTVSTPRGAFGAPRAALGALKRALPGLLAWLVALALFFPIFWMAITAFKTEQQAYSSALFFVPTLDSFREVFARSNY
FAFAWNSVLISAGVTVICLLLAVPAAYAMAFFPGRRTQKVLLWMLSTKMMPSVGVLVPIYLMWKNAGLLDTVSGLVIVYT
LINLPIAVWMTFTYFNEIPKDILEAGRIDGASTWQEIVYLLMPMALPGLASTALLLVILSWNEAFWSINLSSSNAAPLTV
FIASYSSPEGLFWAKLSAASLLAVAPILVVGWLSQKQLVRGLTFGAVK

Sequences:

>Translated_288_residues
MSDLTVSTPRGAFGAPRAALGALKRALPGLLAWLVALALFFPIFWMAITAFKTEQQAYSSALFFVPTLDSFREVFARSNY
FAFAWNSVLISAGVTVICLLLAVPAAYAMAFFPGRRTQKVLLWMLSTKMMPSVGVLVPIYLMWKNAGLLDTVSGLVIVYT
LINLPIAVWMTFTYFNEIPKDILEAGRIDGASTWQEIVYLLMPMALPGLASTALLLVILSWNEAFWSINLSSSNAAPLTV
FIASYSSPEGLFWAKLSAASLLAVAPILVVGWLSQKQLVRGLTFGAVK
>Mature_287_residues
SDLTVSTPRGAFGAPRAALGALKRALPGLLAWLVALALFFPIFWMAITAFKTEQQAYSSALFFVPTLDSFREVFARSNYF
AFAWNSVLISAGVTVICLLLAVPAAYAMAFFPGRRTQKVLLWMLSTKMMPSVGVLVPIYLMWKNAGLLDTVSGLVIVYTL
INLPIAVWMTFTYFNEIPKDILEAGRIDGASTWQEIVYLLMPMALPGLASTALLLVILSWNEAFWSINLSSSNAAPLTVF
IASYSSPEGLFWAKLSAASLLAVAPILVVGWLSQKQLVRGLTFGAVK

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=282, Percent_Identity=31.9148936170213, Blast_Score=101, Evalue=6e-23,
Organism=Escherichia coli, GI1790464, Length=214, Percent_Identity=34.5794392523364, Blast_Score=93, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31419; Mature: 31287

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLTVSTPRGAFGAPRAALGALKRALPGLLAWLVALALFFPIFWMAITAFKTEQQAYSS
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALFFVPTLDSFREVFARSNYFAFAWNSVLISAGVTVICLLLAVPAAYAMAFFPGRRTQKV
HEEEEECHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
LLWMLSTKMMPSVGVLVPIYLMWKNAGLLDTVSGLVIVYTLINLPIAVWMTFTYFNEIPK
HHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DILEAGRIDGASTWQEIVYLLMPMALPGLASTALLLVILSWNEAFWSINLSSSNAAPLTV
HHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEE
FIASYSSPEGLFWAKLSAASLLAVAPILVVGWLSQKQLVRGLTFGAVK
EEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
SDLTVSTPRGAFGAPRAALGALKRALPGLLAWLVALALFFPIFWMAITAFKTEQQAYSS
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALFFVPTLDSFREVFARSNYFAFAWNSVLISAGVTVICLLLAVPAAYAMAFFPGRRTQKV
HEEEEECHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
LLWMLSTKMMPSVGVLVPIYLMWKNAGLLDTVSGLVIVYTLINLPIAVWMTFTYFNEIPK
HHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DILEAGRIDGASTWQEIVYLLMPMALPGLASTALLLVILSWNEAFWSINLSSSNAAPLTV
HHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEE
FIASYSSPEGLFWAKLSAASLLAVAPILVVGWLSQKQLVRGLTFGAVK
EEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]