| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is yieH [H]
Identifier: 126453369
GI number: 126453369
Start: 862144
End: 862842
Strand: Direct
Name: yieH [H]
Synonym: BURPS1106A_0879
Alternate gene names: 126453369
Gene position: 862144-862842 (Clockwise)
Preceding gene: 126454655
Following gene: 126454613
Centisome position: 21.62
GC content: 74.11
Gene sequence:
>699_bases ATGACGGCGCACGCGAACGACGCGCGCGTGCTCATCTGCGATTGCGACGGCGTGCTGATCGACAGCGAGACGATCGCGGC CGACGTGCTCGTGCGCGAGCTCGAGGCGCGCTGGCCGGGCGTCGCGGCGCGGCCGATCGTGTTGCCGCTGCTCGGATTGC GCACCGAGCGCGTGCTCGACTGCGCGAGCGCGCGCGCGGGCCGCGCGCTCGCCGATTCGGATATCGAAGCGATTCGGCGC AGCGTCGAGGCGGCCGCGGTTCAGGCGCCGATCGTCGACGGCATCGACGCGGCGCTCGCGCGAATCGACCTGACGATCGC ATGCGCGAGCAACAGCCGTCGGCATTACGTCGACGCCGCGCTGCGCCGCACGGGCCTCAAGCGCTTCTTCGGCGAGCGCC TGTTCTGCGCGGACGGCGTCGCGCGGCCGAAGCCCGCGCCCGACGTCTATCTGGCCGCCGCGCAAGCGCTCGGCGTCGCG CCGTCGCAATGTCTCGTCGTCGAGGACAGCGCGACCGGCGTGACGGCCGCGTCGGCGGCCGGCATGACGGTGCTCGGCTT CGTCGGCGGCGGCCACGCGTCGCCGCGGCAGGTCGACGCGCTGCGCGCAATCGGCGCGCGGCGCGTGTTCGACGACATGC GCGAGCTGCCCGGCCTCGTCTCGCGGTGGGCCGAGACGGGCGTGGTCGAGCCGCACTGA
Upstream 100 bases:
>100_bases AGCTGTCGGCGGCGTCGCTGCTCGCGGTCGCGCCGATCCTCGTCGTCGGGTGGCTATCGCAGAAGCAGCTCGTGCGCGGC CTCACGTTCGGGGCGGTCAA
Downstream 100 bases:
>100_bases ACGATCGTGCCGCGCGCGCCCGACGCGCCGTGCGGCCGCACAACTGAACGGAGACAAATCATGGCAAGCGTGCTCCTGCG CAATATCGGCAAGCGCTACG
Product: HAD family hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MTAHANDARVLICDCDGVLIDSETIAADVLVRELEARWPGVAARPIVLPLLGLRTERVLDCASARAGRALADSDIEAIRR SVEAAAVQAPIVDGIDAALARIDLTIACASNSRRHYVDAALRRTGLKRFFGERLFCADGVARPKPAPDVYLAAAQALGVA PSQCLVVEDSATGVTAASAAGMTVLGFVGGGHASPRQVDALRAIGARRVFDDMRELPGLVSRWAETGVVEPH
Sequences:
>Translated_232_residues MTAHANDARVLICDCDGVLIDSETIAADVLVRELEARWPGVAARPIVLPLLGLRTERVLDCASARAGRALADSDIEAIRR SVEAAAVQAPIVDGIDAALARIDLTIACASNSRRHYVDAALRRTGLKRFFGERLFCADGVARPKPAPDVYLAAAQALGVA PSQCLVVEDSATGVTAASAAGMTVLGFVGGGHASPRQVDALRAIGARRVFDDMRELPGLVSRWAETGVVEPH >Mature_231_residues TAHANDARVLICDCDGVLIDSETIAADVLVRELEARWPGVAARPIVLPLLGLRTERVLDCASARAGRALADSDIEAIRRS VEAAAVQAPIVDGIDAALARIDLTIACASNSRRHYVDAALRRTGLKRFFGERLFCADGVARPKPAPDVYLAAAQALGVAP SQCLVVEDSATGVTAASAAGMTVLGFVGGGHASPRQVDALRAIGARRVFDDMRELPGLVSRWAETGVVEPH
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates phosphoenolpyruvate and AMP [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Escherichia coli, GI1790151, Length=187, Percent_Identity=25.668449197861, Blast_Score=82, Evalue=2e-17, Organism=Escherichia coli, GI1789046, Length=177, Percent_Identity=32.2033898305085, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1788021, Length=177, Percent_Identity=31.0734463276836, Blast_Score=62, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 24384; Mature: 24253
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAHANDARVLICDCDGVLIDSETIAADVLVRELEARWPGVAARPIVLPLLGLRTERVLD CCCCCCCCEEEEECCCCEEECCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHH CASARAGRALADSDIEAIRRSVEAAAVQAPIVDGIDAALARIDLTIACASNSRRHYVDAA HHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEEEEEECCCCCHHHHHHH LRRTGLKRFFGERLFCADGVARPKPAPDVYLAAAQALGVAPSQCLVVEDSATGVTAASAA HHHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHC GMTVLGFVGGGHASPRQVDALRAIGARRVFDDMRELPGLVSRWAETGVVEPH CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TAHANDARVLICDCDGVLIDSETIAADVLVRELEARWPGVAARPIVLPLLGLRTERVLD CCCCCCCEEEEECCCCEEECCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHH CASARAGRALADSDIEAIRRSVEAAAVQAPIVDGIDAALARIDLTIACASNSRRHYVDAA HHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEEEEEECCCCCHHHHHHH LRRTGLKRFFGERLFCADGVARPKPAPDVYLAAAQALGVAPSQCLVVEDSATGVTAASAA HHHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHC GMTVLGFVGGGHASPRQVDALRAIGARRVFDDMRELPGLVSRWAETGVVEPH CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7686882; 9278503 [H]